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LOCUS XM_017144166 7941 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X25, mRNA. ACCESSION XM_017144166 VERSION XM_017144166.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144166.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7941 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7941 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins" /db_xref="GeneID:108059094" CDS 785..7102 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X25" /protein_id="XP_016999655.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL EDIDPFYSNVLTFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFII TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDE GISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTYTIRNGRGRFGI PGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLGSRHSSYTSH QSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTTCLDTNHKLEH RDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSRASDR GVSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKLQEWISLIVFDPF VELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLCAMSPKYY FQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGR TMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNFTDFMHSFMIV FRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAP TADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSEHGDNELELGH DEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKYLNNATDDDTASIN SYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEGECEEGPLDGDIII HAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFETA VITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFT NAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNA LVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACES ENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYL YFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKK PLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYL NAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTL LRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFF MHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPG NCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIW QQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDA LTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHK ARGEGGGGGGGSFEPDPDQVDGDGGGDPDAGEPANDEPADGMAEAPAGGGGGGGGGDG SVNGGGTGTGTGDGAADAADESNVNSPGEDAASAAAGAATGATAGSPGAGSAGRQTAV LVESDGFVTKNGHKVVIHSRSPSITSRTADV" misc_feature 1238..2092 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2441..2941 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3170..3805 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3881..4540 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 4550..5365 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5333..5491 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5378..5389 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5513..6265 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6296..6439 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acacgcgctg cggcagctga cagtttcagt aaaccacgga gacgaacgga ttacggctct 61 gggaacaaaa cgcaacgttt gatgaaaatt tttggcaact cgtcgcgtcg tcttggttgt 121 tgttaaccac atcctgctaa cgccaaagtc cgaaaataaa attcaaccca aatacccaaa 181 aataacacag atcaaacaaa caaagcaaaa aaaaagcaaa caaaataaca aaaaaaaacc 241 aaaaaaaaaa acaaacaaaa aattcatctt ctacttgttc taccgcttca actttattcg 301 tcttcgtctc cgtaataaat atataaaaag tatatacata tatatatata tatatatgca 361 tatgtgtgtg agtgcgtcgc gtgtgtgttg gtgcctgtaa atgtgtgagc cacaacaaca 421 acaacagcag cagcagccag agccagagca acaaccacag cagcagcaac aacaacaaca 481 acaacagtag ttaacagcag caacaattct tagcagcaat aacaatacaa gcaagcacca 541 ccacaacaac aagagcagca acaacaccaa aaacagccac aatagcaatc acaataacaa 601 catcaaagga tagagcgagc agccaagcac aacatcgatt gacatcgatt aacgcatcgt 661 gctaagcggc gggcgctaat cgaacatggc gcctcggata tagttgtagc tttaatgtag 721 caggcgacat ccatgtgcct catgccttgg aaatctaagg ctctcatcgt tggccgcata 781 gacaatgaca gaagattccg actcgatatc tgaggaagaa cgcagtttgt tccgtccctt 841 tacccgcgaa tcattggtgc aaatcgaaca acgcattgcc gctgaacatg aaaagcagaa 901 ggagctggaa agaaagagag ccgagggaga ggtgccgcaa tatggtcgca agaaaaaaca 961 aaaagaaatc cgatatgatg acgaggacga ggatgaaggt ccacaaccgg atcctacact 1021 tgaacagggt gtgccaatac ctgttcgatt gcagggcagc ttcccgccgg aattggcctc 1081 cactcctctc gaggatatcg atcccttcta cagcaatgta ctgacattcg tagttgtaag 1141 caaaggaaaa gatatttttc gcttttctgc atcaaaagca atgtggatgc tcgatccatt 1201 caatccgata cgtcgtgtgg ccatttacat tctagtgcat ccattatttt ccctattcat 1261 catcaccaca attctcgtca actgcatcct gatgataatg ccgacaacgc ccacggttga 1321 gtccactgag gtgatattca ccggaatcta cacatttgaa tcagctgtta aagtgatggc 1381 acgaggtttc attttatgcc cgtttacgta tcttagagat gcatggaatt ggctggactt 1441 cgtagtaata gctttagctt atgtgaccat gggtatagat ttaggtaatc tagcagcctt 1501 gcgaacgttt agggtgctgc gagcgcttaa aaccgtagcc attgtgccag gcttgaagac 1561 catcgtcggc gccgtcatcg aatcggtgaa gaatctgcgc gatgtgataa tcctcaccat 1621 gttctccctg tcggtcttcg cgctgatggg cctgcagatc tacatgggcg tgctcacgca 1681 gaagtgcatc aagaagttcc cgctggacgg ctcctggggc aatctgaccg acgagaactg 1741 ggactatcac aatcgcaaca gctccaattg gtactcggag gacgagggca tctcatttcc 1801 gctgtgcggc aatatatccg gcgcggggca atgcgacgat gactacgtgt gtctgcaggg 1861 gtttgggccg aatccgaact acggctacac cagcttcgat tcattcggct gggccttcct 1921 gtccgccttc cggctgatga cacaggactt ctgggaggac ctctaccagc tggtgttgcg 1981 cgccgccgga ccatggcaca tgctgttctt tatagtcatc atcttcctag gttcattcta 2041 tcttgtgaat ttgattttgg ccattgttgc catgtcgtat gacgaattgc aaaagaaggc 2101 cgaagaagaa gaggctgccg aagaggaggc gatacgtgaa gcggaggagg ctgccgccgc 2161 caaagctgcc aagctggagg agcgggccaa tgcgcaggct caggcagcag cggatgcggc 2221 tgccgccgaa gaggctgcac tgcatccgga gatggccaag agtccgacgt attcgtgcat 2281 cagctatgag cttttcgttg gcggcgagaa gggcaacgat gacaacaaca aggagaagat 2341 gtccattcgc agcgtcgagg tggagtcgga gtcggtgagc gttatacaaa gacaaccagc 2401 acctaccaca gcacaccaag ctaccaaagt tcgtaaagtg agcacgtaca cgatacggaa 2461 cggacgtggc cgctttggta tacccggtag cgatcgcaag ccgttggtat tgtcaacata 2521 tcaggatgcc cagcagcact tgccctatgc cgacgactcg aatgccgtca ccccgatgtc 2581 cgaggagaac ggggccatca tagtgcccgt gtactatggc aacctaggct ctcggcactc 2641 atcgtatacc tcgcatcagt cccgaatatc gtatacctca catggcgatc tactcggcgg 2701 catggccgtc atgggcgtca gcacaatgac caaggagagc aaattgcgca accgcaacac 2761 acgcaatcaa tcagtgggcg ccaccaatgg cggcaccacc tgcctggaca ccaatcacaa 2821 gctcgagcat cgcgactacg aaatcggtct ggagtgcacg gacgaagctg gcaagattaa 2881 acatcatgac aatcctttta tcgagcccgt ccagacacaa acggtggtcg acatgaaaga 2941 tgtgatggtc ctgaatgaca tcatcgaaca ggccgctggt cggcacagtc gggcaagcga 3001 tcgcggtgtc tccgtttact attttccaac agaggacgat gacgaggacg ggccgacgtt 3061 caaagacaag gcactcgaag tgatcctaaa gggcatcgat gtgttttgtg tgtgggactg 3121 ttgctgggtt tggttgaaat tgcaggagtg gatctcgctg atcgtcttcg atcccttcgt 3181 cgagctcttc atcacgctgt gcattgtggt caacacgatg ttcatggcga tggatcacca 3241 cgatatgaac aaggagatgg agcgcgtgct caagagtggc aactatttct tcacggccac 3301 ctttgccatc gaggccacca tgaagctgtg cgccatgagc cccaagtact atttccagga 3361 gggctggaac atcttcgact tcatcatcgt ggccctgtcg cttttggagc tgggtctcga 3421 gggcgtccag ggcctgtccg tcttgcgttc gtttcgattg ctgcgtgtat ttaaattggc 3481 caaatcttgg ccaacactta atttactcat ttcgattatg ggacgcacca tgggcgcttt 3541 gggtaatctg acatttgtac tttgcattat catcttcatc tttgcggtga tgggaatgca 3601 actgttcgga aagaattatc atgatcacaa ggaccgtttc ccggatggcg acctgccgcg 3661 ctggaacttc accgacttta tgcacagctt catgatcgtg ttccgggtgc tctgcggcga 3721 atggatcgag tccatgtggg actgtatgta cgtgggcgat gtctcgtgca ttcccttctt 3781 cttggccacc gttgtcatcg gcaatcttgt ggtacttaac cttttcttag ccttgctttt 3841 gtccaatttt ggctcatcta gcttatcagc gccgactgcc gataacgata cgaataaaat 3901 agccgaggcc ttcaatcgaa ttggccgatt taaaagttgg gttaagcgta atattgctga 3961 ttgtttcaag ttaatacgta acaaattgac aaatcaaata agtgatcaac catcagagca 4021 tggtgacaac gaactggagc tggggcacga cgagatcctc gccgatggcc tgatcaagaa 4081 gggaatcaag gagcagacgc aactggaggt ggccatcggg gatggcatgg agttcacgat 4141 acacggcgac atgaagaaca acaagccgaa gaaatccaaa tatctaaata acgcaacgga 4201 cgacgacact gccagcatta actcatatgg tagccataag aatcgaccat tcaaggacga 4261 gagccacaag ggcagcgccg agacgatgga gggcgaggag aagcgcgacg ccagcaagga 4321 ggatttaggt ctcgacgagg aactggacga ggagggcgaa tgcgaggagg gcccgctcga 4381 cggtgatatc attattcatg cacacgacga ggatatactc gatgaatatc cagctgattg 4441 ctgccccgat tcgtactata agaaatttcc gatcttagcc ggtgacgatg actcgccgtt 4501 ctggcaagga tggggcaatt tacgactgaa aacttttcaa ttaattgaaa ataaatattt 4561 tgaaacagct gttatcacta tgattttaat gagtagctta gctttggcat tagaagatgt 4621 acatctgcca caaagaccca tactgcagga tattttatac tatatggaca gaatatttac 4681 ggttatattc ttcttggaaa tgttaatcaa gtggttggcg ctcggcttca aagtgtactt 4741 caccaacgcg tggtgttggc tcgatttcgt gattgtcatg gtatcgctta tcaacttcgt 4801 tgcttcactt gttggagctg gtggtattca agccttcaag actatgcgaa cgttaagagc 4861 actgagacca ctacgtgcca tgtcccgtat gcagggcatg agggtcgtcg ttaatgcgct 4921 ggtacaagct ataccgtcca tcttcaatgt gctattggtg tgtctaatat tttggctaat 4981 ttttgccata atgggtgtac agctttttgc tggaaaatat tttaagtgcg aggacatgaa 5041 cggcacgaag ctcagccacg agatcatacc aaatcgcaat gcctgcgaga gcgagaacta 5101 cacgtgggtg aattcagcaa tgaatttcga tcatgtaggt aacgcgtatc tgtgcctttt 5161 ccaagtggcc accttcaaag gctggataca aataatgaac gatgctatcg attcacgaga 5221 ggtggacaag caaccaattc gtgaaacgaa catctacatg tatttatatt tcgtattctt 5281 catcatattt ggatcatttt tcacactcaa tctgttcatt ggtgttatca ttgataattt 5341 taatgagcaa aagaaaaaag caggtggatc attagaaatg ttcatgacag aagatcagaa 5401 aaagtactat aatgctatga aaaagatggg ctctaaaaaa ccattaaaag ccattccaag 5461 accaaggtgg cgaccacaag caatagtctt tgaaatagta accgataaga aattcgatat 5521 aatcattatg ttattcattg gtctgaacat gttcaccatg accctcgatc gttacgatgc 5581 gtcggacacg tacaacgcgg tcctagacta tctcaatgcg atattcgtag ttattttcag 5641 ttccgaatgt ctattaaaaa tattcgcttt acgatatcac tattttattg agccatggaa 5701 tttatttgat gtagtagttg tcattttatc catcttaggt ctcgtactta gcgatattat 5761 cgagaagtac ttcgtgtcgc cgaccctgct ccgagtggtg cgtgtggcga aagtgggtcg 5821 agtcctgcga ctggtgaagg gcgccaaggg catcaggaca ctgctattcg cgttggccat 5881 gtcgctgccg gccctcttca acatctgcct gctgctgttc ctggtcatgt tcatcttcgc 5941 catcttcggc atgtcgttct tcatgcacgt gaaggagaag agcggcatca acgacgtcta 6001 caacttcaag acctttggtc agagcatgat cctgctcttt cagatgtcga cgtcagccgg 6061 ttgggatggt gtactggacg ccattatcaa tgaggaagca tgcgatccac ccgacaacga 6121 caaaggctat ccgggcaatt gtggttcagc gaccgttgga ataacgtttc tcctctcata 6181 cctagttata agctttttga tagttattaa tatgtacatt gctgtcattc tcgagaacta 6241 tagtcaggcc accgaggacg tgcaagaggg tctaaccgac gacgactacg acatgtacta 6301 cgagatctgg cagcaattcg atccggaggg cacccagtat atacgctacg accagctgtc 6361 cgaattcctg gacgtgctgg agcccccgct gcagatccat aagccgaaca agtacaagat 6421 catatcgatg gacataccca tctgtcgcgg cgacctcatg tactgtgtcg acatcctcga 6481 cgccctcacg aaagacttct ttgcgcgcaa gggcaatccg attgaggaga cgggcgagat 6541 cggtgagata gccgcccgtc cggacacgga gggctatgag cccgtctcat cgacgctgtg 6601 gcgccagcgg gaggagtact gtgcccgtct catccagcac gcctggcgga agcacaaggc 6661 gcgcggcgag ggcggtggtg gtggtggtgg gtccttcgag ccggatccgg atcaggtcga 6721 tggcgatggt ggtggcgatc cggatgccgg ggagcctgca aacgacgaac cggcggatgg 6781 gatggctgag gcccccgcag gaggaggagg aggaggagga ggaggagatg gtagtgttaa 6841 tggtggagga actggaactg gaactggaga cggagctgcc gatgctgccg acgagagcaa 6901 tgtaaatagt ccgggtgagg atgcagcgtc ggcggcagca ggagcggcga caggagcgac 6961 ggcgggaagt cccggggcgg gcagcgccgg acgacagacc gccgttctcg tggagagcga 7021 cgggttcgtg acgaagaacg gccacaaggt ggtcatccac tcgcgatcgc cgagcatcac 7081 gtcgcgcacg gcggatgtct gagccaggcc tcgccccccc ctccaagatg cacgcgagta 7141 ttagcatgag tacgtgttgg atgttgcatg ttgcgtgttg cgcgttgggt gcttaaccaa 7201 tccagtgcgt catgtgcaac taaacagtga gctaacaaca acagcgaaca aggcgaacaa 7261 caagcataat tttctgctat atataatgaa agtacaccat acaacaaaac aatcgaaaca 7321 aaccaacaac agtaacaaca tcatcaagag aacaaccaca acaacaacag taacaacaat 7381 cgatgaaata acgaagaaga acaacaacaa caccagtgta atgtctttga gttacaaaac 7441 atacatacat acatatacat actatatatt tgtatacccg cattattcag ttaacgagtc 7501 agcaaccaac aacaatcata cttaagctaa acaaccgaaa tgtcgaaata ttttgtaagc 7561 agctcgtagt ccaatccatt taggcgtttt ttccaaacca aacaatttgc ctaagcaggt 7621 ggaagaagaa gtaaaacatc aacacaccca cactagagct tgaaaatgat cgataaatac 7681 cgattcgata atatcgatgt tttcaaggca aaacacatat ttaatatcga gaaagtgcaa 7741 actgtcgata ttttccaagc tctaacatac acacaaaacc cacacacaac acactcacac 7801 ataaccataa acaaatataa tcccaaaaaa caaaaaacca aaaccgataa caaagttaaa 7861 gaacgatgaa caagctctaa aaattgtatt tgccagtagt gggacaacaa acaacacgct 7921 tgatttaatt aactaccaaa c