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LOCUS XM_017144165 7947 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X24, mRNA. ACCESSION XM_017144165 VERSION XM_017144165.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144165.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7947 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7947 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:108059094" CDS 785..7108 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X24" /protein_id="XP_016999654.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL EDIDPFYSNVLTFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFII TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDE GISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTYTIRNGRGRFGI PGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLGSRHSSYTSH QSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTTCLDTNHKLEH RDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSRASDR GEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKLQEWISLIVFDPFVELFITLC IVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLCAMSPKYYFQEGWNIF DFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNL TFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEW IESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTNK IAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGKGVCRCISAEHGDNELEL GHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKYLNNATDDDTAS INSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEGECEEGPLDGDI IIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFE TAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVY FTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVV NALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNAC ESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYM YLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGS KKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLD YLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSP TLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMS FFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGY PGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYE IWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDIL DALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRK HKARGEGGGGGGGSFEPDPDQVDGDGGGDPDAGEPANDEPADGMAEAPAGGGGGGGGG DGSVNGGGTGTGTGDGAADAADESNVNSPGEDAASAAAGAATGATAGSPGAGSAGRQT AVLVESDGFVTKNGHKVVIHSRSPSITSRTADV" misc_feature 1238..2092 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2441..2941 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3146..3781 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3857..4546 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 4556..5371 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5339..5497 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5384..5395 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5519..6271 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6302..6445 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acacgcgctg cggcagctga cagtttcagt aaaccacgga gacgaacgga ttacggctct 61 gggaacaaaa cgcaacgttt gatgaaaatt tttggcaact cgtcgcgtcg tcttggttgt 121 tgttaaccac atcctgctaa cgccaaagtc cgaaaataaa attcaaccca aatacccaaa 181 aataacacag atcaaacaaa caaagcaaaa aaaaagcaaa caaaataaca aaaaaaaacc 241 aaaaaaaaaa acaaacaaaa aattcatctt ctacttgttc taccgcttca actttattcg 301 tcttcgtctc cgtaataaat atataaaaag tatatacata tatatatata tatatatgca 361 tatgtgtgtg agtgcgtcgc gtgtgtgttg gtgcctgtaa atgtgtgagc cacaacaaca 421 acaacagcag cagcagccag agccagagca acaaccacag cagcagcaac aacaacaaca 481 acaacagtag ttaacagcag caacaattct tagcagcaat aacaatacaa gcaagcacca 541 ccacaacaac aagagcagca acaacaccaa aaacagccac aatagcaatc acaataacaa 601 catcaaagga tagagcgagc agccaagcac aacatcgatt gacatcgatt aacgcatcgt 661 gctaagcggc gggcgctaat cgaacatggc gcctcggata tagttgtagc tttaatgtag 721 caggcgacat ccatgtgcct catgccttgg aaatctaagg ctctcatcgt tggccgcata 781 gacaatgaca gaagattccg actcgatatc tgaggaagaa cgcagtttgt tccgtccctt 841 tacccgcgaa tcattggtgc aaatcgaaca acgcattgcc gctgaacatg aaaagcagaa 901 ggagctggaa agaaagagag ccgagggaga ggtgccgcaa tatggtcgca agaaaaaaca 961 aaaagaaatc cgatatgatg acgaggacga ggatgaaggt ccacaaccgg atcctacact 1021 tgaacagggt gtgccaatac ctgttcgatt gcagggcagc ttcccgccgg aattggcctc 1081 cactcctctc gaggatatcg atcccttcta cagcaatgta ctgacattcg tagttgtaag 1141 caaaggaaaa gatatttttc gcttttctgc atcaaaagca atgtggatgc tcgatccatt 1201 caatccgata cgtcgtgtgg ccatttacat tctagtgcat ccattatttt ccctattcat 1261 catcaccaca attctcgtca actgcatcct gatgataatg ccgacaacgc ccacggttga 1321 gtccactgag gtgatattca ccggaatcta cacatttgaa tcagctgtta aagtgatggc 1381 acgaggtttc attttatgcc cgtttacgta tcttagagat gcatggaatt ggctggactt 1441 cgtagtaata gctttagctt atgtgaccat gggtatagat ttaggtaatc tagcagcctt 1501 gcgaacgttt agggtgctgc gagcgcttaa aaccgtagcc attgtgccag gcttgaagac 1561 catcgtcggc gccgtcatcg aatcggtgaa gaatctgcgc gatgtgataa tcctcaccat 1621 gttctccctg tcggtcttcg cgctgatggg cctgcagatc tacatgggcg tgctcacgca 1681 gaagtgcatc aagaagttcc cgctggacgg ctcctggggc aatctgaccg acgagaactg 1741 ggactatcac aatcgcaaca gctccaattg gtactcggag gacgagggca tctcatttcc 1801 gctgtgcggc aatatatccg gcgcggggca atgcgacgat gactacgtgt gtctgcaggg 1861 gtttgggccg aatccgaact acggctacac cagcttcgat tcattcggct gggccttcct 1921 gtccgccttc cggctgatga cacaggactt ctgggaggac ctctaccagc tggtgttgcg 1981 cgccgccgga ccatggcaca tgctgttctt tatagtcatc atcttcctag gttcattcta 2041 tcttgtgaat ttgattttgg ccattgttgc catgtcgtat gacgaattgc aaaagaaggc 2101 cgaagaagaa gaggctgccg aagaggaggc gatacgtgaa gcggaggagg ctgccgccgc 2161 caaagctgcc aagctggagg agcgggccaa tgcgcaggct caggcagcag cggatgcggc 2221 tgccgccgaa gaggctgcac tgcatccgga gatggccaag agtccgacgt attcgtgcat 2281 cagctatgag cttttcgttg gcggcgagaa gggcaacgat gacaacaaca aggagaagat 2341 gtccattcgc agcgtcgagg tggagtcgga gtcggtgagc gttatacaaa gacaaccagc 2401 acctaccaca gcacaccaag ctaccaaagt tcgtaaagtg agcacgtaca cgatacggaa 2461 cggacgtggc cgctttggta tacccggtag cgatcgcaag ccgttggtat tgtcaacata 2521 tcaggatgcc cagcagcact tgccctatgc cgacgactcg aatgccgtca ccccgatgtc 2581 cgaggagaac ggggccatca tagtgcccgt gtactatggc aacctaggct ctcggcactc 2641 atcgtatacc tcgcatcagt cccgaatatc gtatacctca catggcgatc tactcggcgg 2701 catggccgtc atgggcgtca gcacaatgac caaggagagc aaattgcgca accgcaacac 2761 acgcaatcaa tcagtgggcg ccaccaatgg cggcaccacc tgcctggaca ccaatcacaa 2821 gctcgagcat cgcgactacg aaatcggtct ggagtgcacg gacgaagctg gcaagattaa 2881 acatcatgac aatcctttta tcgagcccgt ccagacacaa acggtggtcg acatgaaaga 2941 tgtgatggtc ctgaatgaca tcatcgaaca ggccgctggt cggcacagtc gggcaagcga 3001 tcgcggtgag gacgatgacg aggacgggcc gacgttcaaa gacaaggcac tcgaagtgat 3061 cctaaagggc atcgatgtgt tttgtgtgtg ggactgttgc tgggtttggt tgaaattgca 3121 ggagtggatc tcgctgatcg tcttcgatcc cttcgtcgag ctcttcatca cgctgtgcat 3181 tgtggtcaac acgatgttca tggcgatgga tcaccacgat atgaacaagg agatggagcg 3241 cgtgctcaag agtggcaact atttcttcac ggccaccttt gccatcgagg ccaccatgaa 3301 gctgtgcgcc atgagcccca agtactattt ccaggagggc tggaacatct tcgacttcat 3361 catcgtggcc ctgtcgcttt tggagctggg tctcgagggc gtccagggcc tgtccgtctt 3421 gcgttcgttt cgattgctgc gtgtatttaa attggccaaa tcttggccaa cacttaattt 3481 actcatttcg attatgggac gcaccatggg cgctttgggt aatctgacat ttgtactttg 3541 cattatcatc ttcatctttg cggtgatggg aatgcaactg ttcggaaaga attatcatga 3601 tcacaaggac cgtttcccgg atggcgacct gccgcgctgg aacttcaccg actttatgca 3661 cagcttcatg atcgtgttcc gggtgctctg cggcgaatgg atcgagtcca tgtgggactg 3721 tatgtacgtg ggcgatgtct cgtgcattcc cttcttcttg gccaccgttg tcatcggcaa 3781 tcttgtggta cttaaccttt tcttagcctt gcttttgtcc aattttggct catctagctt 3841 atcagcgccg actgccgata acgatacgaa taaaatagcc gaggccttca atcgaattgg 3901 ccgatttaaa agttgggtta agcgtaatat tgctgattgt ttcaagttaa tacgtaacaa 3961 attgacaaat caaataagtg atcaaccatc aggcaaaggc gtttgtcgtt gtatatctgc 4021 agagcatggt gacaacgaac tggagctggg gcacgacgag atcctcgccg atggcctgat 4081 caagaaggga atcaaggagc agacgcaact ggaggtggcc atcggggatg gcatggagtt 4141 cacgatacac ggcgacatga agaacaacaa gccgaagaaa tccaaatatc taaataacgc 4201 aacggacgac gacactgcca gcattaactc atatggtagc cataagaatc gaccattcaa 4261 ggacgagagc cacaagggca gcgccgagac gatggagggc gaggagaagc gcgacgccag 4321 caaggaggat ttaggtctcg acgaggaact ggacgaggag ggcgaatgcg aggagggccc 4381 gctcgacggt gatatcatta ttcatgcaca cgacgaggat atactcgatg aatatccagc 4441 tgattgctgc cccgattcgt actataagaa atttccgatc ttagccggtg acgatgactc 4501 gccgttctgg caaggatggg gcaatttacg actgaaaact tttcaattaa ttgaaaataa 4561 atattttgaa acagctgtta tcactatgat tttaatgagt agcttagctt tggcattaga 4621 agatgtacat ctgccacaaa gacccatact gcaggatatt ttatactata tggacagaat 4681 atttacggtt atattcttct tggaaatgtt aatcaagtgg ttggcgctcg gcttcaaagt 4741 gtacttcacc aacgcgtggt gttggctcga tttcgtgatt gtcatggtat cgcttatcaa 4801 cttcgttgct tcacttgttg gagctggtgg tattcaagcc ttcaagacta tgcgaacgtt 4861 aagagcactg agaccactac gtgccatgtc ccgtatgcag ggcatgaggg tcgtcgttaa 4921 tgcgctggta caagctatac cgtccatctt caatgtgcta ttggtgtgtc taatattttg 4981 gctaattttt gccataatgg gtgtacagct ttttgctgga aaatatttta agtgcgagga 5041 catgaacggc acgaagctca gccacgagat cataccaaat cgcaatgcct gcgagagcga 5101 gaactacacg tgggtgaatt cagcaatgaa tttcgatcat gtaggtaacg cgtatctgtg 5161 ccttttccaa gtggccacct tcaaaggctg gatacaaata atgaacgatg ctatcgattc 5221 acgagaggtg gacaagcaac caattcgtga aacgaacatc tacatgtatt tatatttcgt 5281 attcttcatc atatttggat catttttcac actcaatctg ttcattggtg ttatcattga 5341 taattttaat gagcaaaaga aaaaagcagg tggatcatta gaaatgttca tgacagaaga 5401 tcagaaaaag tactataatg ctatgaaaaa gatgggctct aaaaaaccat taaaagccat 5461 tccaagacca aggtggcgac cacaagcaat agtctttgaa atagtaaccg ataagaaatt 5521 cgatataatc attatgttat tcattggtct gaacatgttc accatgaccc tcgatcgtta 5581 cgatgcgtcg gacacgtaca acgcggtcct agactatctc aatgcgatat tcgtagttat 5641 tttcagttcc gaatgtctat taaaaatatt cgctttacga tatcactatt ttattgagcc 5701 atggaattta tttgatgtag tagttgtcat tttatccatc ttaggtctcg tacttagcga 5761 tattatcgag aagtacttcg tgtcgccgac cctgctccga gtggtgcgtg tggcgaaagt 5821 gggtcgagtc ctgcgactgg tgaagggcgc caagggcatc aggacactgc tattcgcgtt 5881 ggccatgtcg ctgccggccc tcttcaacat ctgcctgctg ctgttcctgg tcatgttcat 5941 cttcgccatc ttcggcatgt cgttcttcat gcacgtgaag gagaagagcg gcatcaacga 6001 cgtctacaac ttcaagacct ttggtcagag catgatcctg ctctttcaga tgtcgacgtc 6061 agccggttgg gatggtgtac tggacgccat tatcaatgag gaagcatgcg atccacccga 6121 caacgacaaa ggctatccgg gcaattgtgg ttcagcgacc gttggaataa cgtttctcct 6181 ctcataccta gttataagct ttttgatagt tattaatatg tacattgctg tcattctcga 6241 gaactatagt caggccaccg aggacgtgca agagggtcta accgacgacg actacgacat 6301 gtactacgag atctggcagc aattcgatcc ggagggcacc cagtatatac gctacgacca 6361 gctgtccgaa ttcctggacg tgctggagcc cccgctgcag atccataagc cgaacaagta 6421 caagatcata tcgatggaca tacccatctg tcgcggcgac ctcatgtact gtgtcgacat 6481 cctcgacgcc ctcacgaaag acttctttgc gcgcaagggc aatccgattg aggagacggg 6541 cgagatcggt gagatagccg cccgtccgga cacggagggc tatgagcccg tctcatcgac 6601 gctgtggcgc cagcgggagg agtactgtgc ccgtctcatc cagcacgcct ggcggaagca 6661 caaggcgcgc ggcgagggcg gtggtggtgg tggtgggtcc ttcgagccgg atccggatca 6721 ggtcgatggc gatggtggtg gcgatccgga tgccggggag cctgcaaacg acgaaccggc 6781 ggatgggatg gctgaggccc ccgcaggagg aggaggagga ggaggaggag gagatggtag 6841 tgttaatggt ggaggaactg gaactggaac tggagacgga gctgccgatg ctgccgacga 6901 gagcaatgta aatagtccgg gtgaggatgc agcgtcggcg gcagcaggag cggcgacagg 6961 agcgacggcg ggaagtcccg gggcgggcag cgccggacga cagaccgccg ttctcgtgga 7021 gagcgacggg ttcgtgacga agaacggcca caaggtggtc atccactcgc gatcgccgag 7081 catcacgtcg cgcacggcgg atgtctgagc caggcctcgc ccccccctcc aagatgcacg 7141 cgagtattag catgagtacg tgttggatgt tgcatgttgc gtgttgcgcg ttgggtgctt 7201 aaccaatcca gtgcgtcatg tgcaactaaa cagtgagcta acaacaacag cgaacaaggc 7261 gaacaacaag cataattttc tgctatatat aatgaaagta caccatacaa caaaacaatc 7321 gaaacaaacc aacaacagta acaacatcat caagagaaca accacaacaa caacagtaac 7381 aacaatcgat gaaataacga agaagaacaa caacaacacc agtgtaatgt ctttgagtta 7441 caaaacatac atacatacat atacatacta tatatttgta tacccgcatt attcagttaa 7501 cgagtcagca accaacaaca atcatactta agctaaacaa ccgaaatgtc gaaatatttt 7561 gtaagcagct cgtagtccaa tccatttagg cgttttttcc aaaccaaaca atttgcctaa 7621 gcaggtggaa gaagaagtaa aacatcaaca cacccacact agagcttgaa aatgatcgat 7681 aaataccgat tcgataatat cgatgttttc aaggcaaaac acatatttaa tatcgagaaa 7741 gtgcaaactg tcgatatttt ccaagctcta acatacacac aaaacccaca cacaacacac 7801 tcacacataa ccataaacaa atataatccc aaaaaacaaa aaaccaaaac cgataacaaa 7861 gttaaagaac gatgaacaag ctctaaaaat tgtatttgcc agtagtggga caacaaacaa 7921 cacgcttgat ttaattaact accaaac