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LOCUS XM_017144162 7971 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X21, mRNA. ACCESSION XM_017144162 VERSION XM_017144162.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144162.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7971 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7971 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins" /db_xref="GeneID:108059094" CDS 785..7132 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X21" /protein_id="XP_016999651.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNVL TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMI MPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTM GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL MGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNIS GAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGP WHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKA AKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKM SIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYT IRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNL GSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTT CLDTNHKLEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQA AGRHSRASDRGVSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKLQE WISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATM KLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPT LNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNF TDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLS NFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSE HGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKYLNN ATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEGECE EGPLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQ LIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKW LALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSR MQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHE IIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQP IRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYY NAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDAS DTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDI IEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMF IFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACD PPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTD DDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGD LMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTLWRQREEYCAR LIQHAWRKHKARGEGGGGGGGSFEPDPDQVDGDGGGDPDAGEPANDEPADGMAEAPAG GGGGGGGGDGSVNGGGTGTGTGDGAADAADESNVNSPGEDAASAAAGAATGATAGSPG AGSAGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV" misc_feature 1205..2059 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2414..2971 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3200..3835 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3911..4570 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 4580..5395 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5363..5521 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5408..5419 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5543..6295 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6326..6469 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acacgcgctg cggcagctga cagtttcagt aaaccacgga gacgaacgga ttacggctct 61 gggaacaaaa cgcaacgttt gatgaaaatt tttggcaact cgtcgcgtcg tcttggttgt 121 tgttaaccac atcctgctaa cgccaaagtc cgaaaataaa attcaaccca aatacccaaa 181 aataacacag atcaaacaaa caaagcaaaa aaaaagcaaa caaaataaca aaaaaaaacc 241 aaaaaaaaaa acaaacaaaa aattcatctt ctacttgttc taccgcttca actttattcg 301 tcttcgtctc cgtaataaat atataaaaag tatatacata tatatatata tatatatgca 361 tatgtgtgtg agtgcgtcgc gtgtgtgttg gtgcctgtaa atgtgtgagc cacaacaaca 421 acaacagcag cagcagccag agccagagca acaaccacag cagcagcaac aacaacaaca 481 acaacagtag ttaacagcag caacaattct tagcagcaat aacaatacaa gcaagcacca 541 ccacaacaac aagagcagca acaacaccaa aaacagccac aatagcaatc acaataacaa 601 catcaaagga tagagcgagc agccaagcac aacatcgatt gacatcgatt aacgcatcgt 661 gctaagcggc gggcgctaat cgaacatggc gcctcggata tagttgtagc tttaatgtag 721 caggcgacat ccatgtgcct catgccttgg aaatctaagg ctctcatcgt tggccgcata 781 gacaatgaca gaagattccg actcgatatc tgaggaagaa cgcagtttgt tccgtccctt 841 tacccgcgaa tcattggtgc aaatcgaaca acgcattgcc gctgaacatg aaaagcagaa 901 ggagctggaa agaaagagag ccgagggaga ggtgatccga tatgatgacg aggacgagga 961 tgaaggtcca caaccggatc ctacacttga acagggtgtg ccaatacctg ttcgattgca 1021 gggcagcttc ccgccggaat tggcctccac tcctctcgag gatatcgatc ccttctacag 1081 caatgtactg acattcgtag ttgtaagcaa aggaaaagat atttttcgct tttctgcatc 1141 aaaagcaatg tggatgctcg atccattcaa tccgatacgt cgtgtggcca tttacattct 1201 agtgcatcca ttattttccc tattcatcat caccacaatt ctcgtcaact gcatcctgat 1261 gataatgccg acaacgccca cggttgagtc cactgaggtg atattcaccg gaatctacac 1321 atttgaatca gctgttaaag tgatggcacg aggtttcatt ttatgcccgt ttacgtatct 1381 tagagatgca tggaattggc tggacttcgt agtaatagct ttagcttatg tgaccatggg 1441 tatagattta ggtaatctag cagccttgcg aacgtttagg gtgctgcgag cgcttaaaac 1501 cgtagccatt gtgccaggct tgaagaccat cgtcggcgcc gtcatcgaat cggtgaagaa 1561 tctgcgcgat gtgataatcc tcaccatgtt ctccctgtcg gtcttcgcgc tgatgggcct 1621 gcagatctac atgggcgtgc tcacgcagaa gtgcatcaag aagttcccgc tggacggctc 1681 ctggggcaat ctgaccgacg agaactggga ctatcacaat cgcaacagct ccaattggta 1741 ctcggaggac gagggcatct catttccgct gtgcggcaat atatccggcg cggggcaatg 1801 cgacgatgac tacgtgtgtc tgcaggggtt tgggccgaat ccgaactacg gctacaccag 1861 cttcgattca ttcggctggg ccttcctgtc cgccttccgg ctgatgacac aggacttctg 1921 ggaggacctc taccagctgg tgttgcgcgc cgccggacca tggcacatgc tgttctttat 1981 agtcatcatc ttcctaggtt cattctatct tgtgaatttg attttggcca ttgttgccat 2041 gtcgtatgac gaattgcaaa agaaggccga agaagaagag gctgccgaag aggaggcgat 2101 acgtgaagcg gaggaggctg ccgccgccaa agctgccaag ctggaggagc gggccaatgc 2161 gcaggctcag gcagcagcgg atgcggctgc cgccgaagag gctgcactgc atccggagat 2221 ggccaagagt ccgacgtatt cgtgcatcag ctatgagctt ttcgttggcg gcgagaaggg 2281 caacgatgac aacaacaagg agaagatgtc cattcgcagc gtcgaggtgg agtcggagtc 2341 ggtgagcgtt atacaaagac aaccagcacc taccacagca caccaagcta ccaaagttcg 2401 taaagtgagc acgacatcct tatccttacc tggttcaccg tttaacatac gcaggggatc 2461 acgtagttct cacaagtaca cgatacggaa cggacgtggc cgctttggta tacccggtag 2521 cgatcgcaag ccgttggtat tgtcaacata tcaggatgcc cagcagcact tgccctatgc 2581 cgacgactcg aatgccgtca ccccgatgtc cgaggagaac ggggccatca tagtgcccgt 2641 gtactatggc aacctaggct ctcggcactc atcgtatacc tcgcatcagt cccgaatatc 2701 gtatacctca catggcgatc tactcggcgg catggccgtc atgggcgtca gcacaatgac 2761 caaggagagc aaattgcgca accgcaacac acgcaatcaa tcagtgggcg ccaccaatgg 2821 cggcaccacc tgcctggaca ccaatcacaa gctcgagcat cgcgactacg aaatcggtct 2881 ggagtgcacg gacgaagctg gcaagattaa acatcatgac aatcctttta tcgagcccgt 2941 ccagacacaa acggtggtcg acatgaaaga tgtgatggtc ctgaatgaca tcatcgaaca 3001 ggccgctggt cggcacagtc gggcaagcga tcgcggtgtc tccgtttact attttccaac 3061 agaggacgat gacgaggacg ggccgacgtt caaagacaag gcactcgaag tgatcctaaa 3121 gggcatcgat gtgttttgtg tgtgggactg ttgctgggtt tggttgaaat tgcaggagtg 3181 gatctcgctg atcgtcttcg atcccttcgt cgagctcttc atcacgctgt gcattgtggt 3241 caacacgatg ttcatggcga tggatcacca cgatatgaac aaggagatgg agcgcgtgct 3301 caagagtggc aactatttct tcacggccac ctttgccatc gaggccacca tgaagctgtg 3361 cgccatgagc cccaagtact atttccagga gggctggaac atcttcgact tcatcatcgt 3421 ggccctgtcg cttttggagc tgggtctcga gggcgtccag ggcctgtccg tcttgcgttc 3481 gtttcgattg ctgcgtgtat ttaaattggc caaatcttgg ccaacactta atttactcat 3541 ttcgattatg ggacgcacca tgggcgcttt gggtaatctg acatttgtac tttgcattat 3601 catcttcatc tttgcggtga tgggaatgca actgttcgga aagaattatc atgatcacaa 3661 ggaccgtttc ccggatggcg acctgccgcg ctggaacttc accgacttta tgcacagctt 3721 catgatcgtg ttccgggtgc tctgcggcga atggatcgag tccatgtggg actgtatgta 3781 cgtgggcgat gtctcgtgca ttcccttctt cttggccacc gttgtcatcg gcaatcttgt 3841 ggtacttaac cttttcttag ccttgctttt gtccaatttt ggctcatcta gcttatcagc 3901 gccgactgcc gataacgata cgaataaaat agccgaggcc ttcaatcgaa ttggccgatt 3961 taaaagttgg gttaagcgta atattgctga ttgtttcaag ttaatacgta acaaattgac 4021 aaatcaaata agtgatcaac catcagagca tggtgacaac gaactggagc tggggcacga 4081 cgagatcctc gccgatggcc tgatcaagaa gggaatcaag gagcagacgc aactggaggt 4141 ggccatcggg gatggcatgg agttcacgat acacggcgac atgaagaaca acaagccgaa 4201 gaaatccaaa tatctaaata acgcaacgga cgacgacact gccagcatta actcatatgg 4261 tagccataag aatcgaccat tcaaggacga gagccacaag ggcagcgccg agacgatgga 4321 gggcgaggag aagcgcgacg ccagcaagga ggatttaggt ctcgacgagg aactggacga 4381 ggagggcgaa tgcgaggagg gcccgctcga cggtgatatc attattcatg cacacgacga 4441 ggatatactc gatgaatatc cagctgattg ctgccccgat tcgtactata agaaatttcc 4501 gatcttagcc ggtgacgatg actcgccgtt ctggcaagga tggggcaatt tacgactgaa 4561 aacttttcaa ttaattgaaa ataaatattt tgaaacagct gttatcacta tgattttaat 4621 gagtagctta gctttggcat tagaagatgt acatctgcca caaagaccca tactgcagga 4681 tattttatac tatatggaca gaatatttac ggttatattc ttcttggaaa tgttaatcaa 4741 gtggttggcg ctcggcttca aagtgtactt caccaacgcg tggtgttggc tcgatttcgt 4801 gattgtcatg gtatcgctta tcaacttcgt tgcttcactt gttggagctg gtggtattca 4861 agccttcaag actatgcgaa cgttaagagc actgagacca ctacgtgcca tgtcccgtat 4921 gcagggcatg agggtcgtcg ttaatgcgct ggtacaagct ataccgtcca tcttcaatgt 4981 gctattggtg tgtctaatat tttggctaat ttttgccata atgggtgtac agctttttgc 5041 tggaaaatat tttaagtgcg aggacatgaa cggcacgaag ctcagccacg agatcatacc 5101 aaatcgcaat gcctgcgaga gcgagaacta cacgtgggtg aattcagcaa tgaatttcga 5161 tcatgtaggt aacgcgtatc tgtgcctttt ccaagtggcc accttcaaag gctggataca 5221 aataatgaac gatgctatcg attcacgaga ggtggacaag caaccaattc gtgaaacgaa 5281 catctacatg tatttatatt tcgtattctt catcatattt ggatcatttt tcacactcaa 5341 tctgttcatt ggtgttatca ttgataattt taatgagcaa aagaaaaaag caggtggatc 5401 attagaaatg ttcatgacag aagatcagaa aaagtactat aatgctatga aaaagatggg 5461 ctctaaaaaa ccattaaaag ccattccaag accaaggtgg cgaccacaag caatagtctt 5521 tgaaatagta accgataaga aattcgatat aatcattatg ttattcattg gtctgaacat 5581 gttcaccatg accctcgatc gttacgatgc gtcggacacg tacaacgcgg tcctagacta 5641 tctcaatgcg atattcgtag ttattttcag ttccgaatgt ctattaaaaa tattcgcttt 5701 acgatatcac tattttattg agccatggaa tttatttgat gtagtagttg tcattttatc 5761 catcttaggt ctcgtactta gcgatattat cgagaagtac ttcgtgtcgc cgaccctgct 5821 ccgagtggtg cgtgtggcga aagtgggtcg agtcctgcga ctggtgaagg gcgccaaggg 5881 catcaggaca ctgctattcg cgttggccat gtcgctgccg gccctcttca acatctgcct 5941 gctgctgttc ctggtcatgt tcatcttcgc catcttcggc atgtcgttct tcatgcacgt 6001 gaaggagaag agcggcatca acgacgtcta caacttcaag acctttggtc agagcatgat 6061 cctgctcttt cagatgtcga cgtcagccgg ttgggatggt gtactggacg ccattatcaa 6121 tgaggaagca tgcgatccac ccgacaacga caaaggctat ccgggcaatt gtggttcagc 6181 gaccgttgga ataacgtttc tcctctcata cctagttata agctttttga tagttattaa 6241 tatgtacatt gctgtcattc tcgagaacta tagtcaggcc accgaggacg tgcaagaggg 6301 tctaaccgac gacgactacg acatgtacta cgagatctgg cagcaattcg atccggaggg 6361 cacccagtat atacgctacg accagctgtc cgaattcctg gacgtgctgg agcccccgct 6421 gcagatccat aagccgaaca agtacaagat catatcgatg gacataccca tctgtcgcgg 6481 cgacctcatg tactgtgtcg acatcctcga cgccctcacg aaagacttct ttgcgcgcaa 6541 gggcaatccg attgaggaga cgggcgagat cggtgagata gccgcccgtc cggacacgga 6601 gggctatgag cccgtctcat cgacgctgtg gcgccagcgg gaggagtact gtgcccgtct 6661 catccagcac gcctggcgga agcacaaggc gcgcggcgag ggcggtggtg gtggtggtgg 6721 gtccttcgag ccggatccgg atcaggtcga tggcgatggt ggtggcgatc cggatgccgg 6781 ggagcctgca aacgacgaac cggcggatgg gatggctgag gcccccgcag gaggaggagg 6841 aggaggagga ggaggagatg gtagtgttaa tggtggagga actggaactg gaactggaga 6901 cggagctgcc gatgctgccg acgagagcaa tgtaaatagt ccgggtgagg atgcagcgtc 6961 ggcggcagca ggagcggcga caggagcgac ggcgggaagt cccggggcgg gcagcgccgg 7021 acgacagacc gccgttctcg tggagagcga cgggttcgtg acgaagaacg gccacaaggt 7081 ggtcatccac tcgcgatcgc cgagcatcac gtcgcgcacg gcggatgtct gagccaggcc 7141 tcgccccccc ctccaagatg cacgcgagta ttagcatgag tacgtgttgg atgttgcatg 7201 ttgcgtgttg cgcgttgggt gcttaaccaa tccagtgcgt catgtgcaac taaacagtga 7261 gctaacaaca acagcgaaca aggcgaacaa caagcataat tttctgctat atataatgaa 7321 agtacaccat acaacaaaac aatcgaaaca aaccaacaac agtaacaaca tcatcaagag 7381 aacaaccaca acaacaacag taacaacaat cgatgaaata acgaagaaga acaacaacaa 7441 caccagtgta atgtctttga gttacaaaac atacatacat acatatacat actatatatt 7501 tgtatacccg cattattcag ttaacgagtc agcaaccaac aacaatcata cttaagctaa 7561 acaaccgaaa tgtcgaaata ttttgtaagc agctcgtagt ccaatccatt taggcgtttt 7621 ttccaaacca aacaatttgc ctaagcaggt ggaagaagaa gtaaaacatc aacacaccca 7681 cactagagct tgaaaatgat cgataaatac cgattcgata atatcgatgt tttcaaggca 7741 aaacacatat ttaatatcga gaaagtgcaa actgtcgata ttttccaagc tctaacatac 7801 acacaaaacc cacacacaac acactcacac ataaccataa acaaatataa tcccaaaaaa 7861 caaaaaacca aaaccgataa caaagttaaa gaacgatgaa caagctctaa aaattgtatt 7921 tgccagtagt gggacaacaa acaacacgct tgatttaatt aactaccaaa c