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LOCUS XM_017144161 7971 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X20, mRNA. ACCESSION XM_017144161 VERSION XM_017144161.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144161.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7971 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7971 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins" /db_xref="GeneID:108059094" CDS 785..7132 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X20" /protein_id="XP_016999650.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL EDIDPFYSNVLTFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFII TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDE GISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTYTIRNGRGRFGI PGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLGSRHSSYTSH QSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTTCLDTNHKLEH RDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSRASDR GVSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKLQEWISLIVFDPF VELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLCAMSPKYY FQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGR TMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNFTDFMHSFMIV FRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAP TADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGKGVCRCISAE HGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKYLNN ATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEGECE EGPLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQ LIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKW LALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSR MQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHE IIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQP IRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYY NAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDAS DTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDI IEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMF IFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACD PPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGLTD DDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGD LMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTLWRQREEYCAR LIQHAWRKHKARGEGGGGGGGSFEPDPDQVDGDGGGDPDAGEPANDEPADGMAEAPAG GGGGGGGGDGSVNGGGTGTGTGDGAADAADESNVNSPGEDAASAAAGAATGATAGSPG AGSAGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV" misc_feature 1238..2092 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2441..2941 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3170..3805 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3881..4570 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 4580..5395 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5363..5521 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5408..5419 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5543..6295 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6326..6469 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acacgcgctg cggcagctga cagtttcagt aaaccacgga gacgaacgga ttacggctct 61 gggaacaaaa cgcaacgttt gatgaaaatt tttggcaact cgtcgcgtcg tcttggttgt 121 tgttaaccac atcctgctaa cgccaaagtc cgaaaataaa attcaaccca aatacccaaa 181 aataacacag atcaaacaaa caaagcaaaa aaaaagcaaa caaaataaca aaaaaaaacc 241 aaaaaaaaaa acaaacaaaa aattcatctt ctacttgttc taccgcttca actttattcg 301 tcttcgtctc cgtaataaat atataaaaag tatatacata tatatatata tatatatgca 361 tatgtgtgtg agtgcgtcgc gtgtgtgttg gtgcctgtaa atgtgtgagc cacaacaaca 421 acaacagcag cagcagccag agccagagca acaaccacag cagcagcaac aacaacaaca 481 acaacagtag ttaacagcag caacaattct tagcagcaat aacaatacaa gcaagcacca 541 ccacaacaac aagagcagca acaacaccaa aaacagccac aatagcaatc acaataacaa 601 catcaaagga tagagcgagc agccaagcac aacatcgatt gacatcgatt aacgcatcgt 661 gctaagcggc gggcgctaat cgaacatggc gcctcggata tagttgtagc tttaatgtag 721 caggcgacat ccatgtgcct catgccttgg aaatctaagg ctctcatcgt tggccgcata 781 gacaatgaca gaagattccg actcgatatc tgaggaagaa cgcagtttgt tccgtccctt 841 tacccgcgaa tcattggtgc aaatcgaaca acgcattgcc gctgaacatg aaaagcagaa 901 ggagctggaa agaaagagag ccgagggaga ggtgccgcaa tatggtcgca agaaaaaaca 961 aaaagaaatc cgatatgatg acgaggacga ggatgaaggt ccacaaccgg atcctacact 1021 tgaacagggt gtgccaatac ctgttcgatt gcagggcagc ttcccgccgg aattggcctc 1081 cactcctctc gaggatatcg atcccttcta cagcaatgta ctgacattcg tagttgtaag 1141 caaaggaaaa gatatttttc gcttttctgc atcaaaagca atgtggatgc tcgatccatt 1201 caatccgata cgtcgtgtgg ccatttacat tctagtgcat ccattatttt ccctattcat 1261 catcaccaca attctcgtca actgcatcct gatgataatg ccgacaacgc ccacggttga 1321 gtccactgag gtgatattca ccggaatcta cacatttgaa tcagctgtta aagtgatggc 1381 acgaggtttc attttatgcc cgtttacgta tcttagagat gcatggaatt ggctggactt 1441 cgtagtaata gctttagctt atgtgaccat gggtatagat ttaggtaatc tagcagcctt 1501 gcgaacgttt agggtgctgc gagcgcttaa aaccgtagcc attgtgccag gcttgaagac 1561 catcgtcggc gccgtcatcg aatcggtgaa gaatctgcgc gatgtgataa tcctcaccat 1621 gttctccctg tcggtcttcg cgctgatggg cctgcagatc tacatgggcg tgctcacgca 1681 gaagtgcatc aagaagttcc cgctggacgg ctcctggggc aatctgaccg acgagaactg 1741 ggactatcac aatcgcaaca gctccaattg gtactcggag gacgagggca tctcatttcc 1801 gctgtgcggc aatatatccg gcgcggggca atgcgacgat gactacgtgt gtctgcaggg 1861 gtttgggccg aatccgaact acggctacac cagcttcgat tcattcggct gggccttcct 1921 gtccgccttc cggctgatga cacaggactt ctgggaggac ctctaccagc tggtgttgcg 1981 cgccgccgga ccatggcaca tgctgttctt tatagtcatc atcttcctag gttcattcta 2041 tcttgtgaat ttgattttgg ccattgttgc catgtcgtat gacgaattgc aaaagaaggc 2101 cgaagaagaa gaggctgccg aagaggaggc gatacgtgaa gcggaggagg ctgccgccgc 2161 caaagctgcc aagctggagg agcgggccaa tgcgcaggct caggcagcag cggatgcggc 2221 tgccgccgaa gaggctgcac tgcatccgga gatggccaag agtccgacgt attcgtgcat 2281 cagctatgag cttttcgttg gcggcgagaa gggcaacgat gacaacaaca aggagaagat 2341 gtccattcgc agcgtcgagg tggagtcgga gtcggtgagc gttatacaaa gacaaccagc 2401 acctaccaca gcacaccaag ctaccaaagt tcgtaaagtg agcacgtaca cgatacggaa 2461 cggacgtggc cgctttggta tacccggtag cgatcgcaag ccgttggtat tgtcaacata 2521 tcaggatgcc cagcagcact tgccctatgc cgacgactcg aatgccgtca ccccgatgtc 2581 cgaggagaac ggggccatca tagtgcccgt gtactatggc aacctaggct ctcggcactc 2641 atcgtatacc tcgcatcagt cccgaatatc gtatacctca catggcgatc tactcggcgg 2701 catggccgtc atgggcgtca gcacaatgac caaggagagc aaattgcgca accgcaacac 2761 acgcaatcaa tcagtgggcg ccaccaatgg cggcaccacc tgcctggaca ccaatcacaa 2821 gctcgagcat cgcgactacg aaatcggtct ggagtgcacg gacgaagctg gcaagattaa 2881 acatcatgac aatcctttta tcgagcccgt ccagacacaa acggtggtcg acatgaaaga 2941 tgtgatggtc ctgaatgaca tcatcgaaca ggccgctggt cggcacagtc gggcaagcga 3001 tcgcggtgtc tccgtttact attttccaac agaggacgat gacgaggacg ggccgacgtt 3061 caaagacaag gcactcgaag tgatcctaaa gggcatcgat gtgttttgtg tgtgggactg 3121 ttgctgggtt tggttgaaat tgcaggagtg gatctcgctg atcgtcttcg atcccttcgt 3181 cgagctcttc atcacgctgt gcattgtggt caacacgatg ttcatggcga tggatcacca 3241 cgatatgaac aaggagatgg agcgcgtgct caagagtggc aactatttct tcacggccac 3301 ctttgccatc gaggccacca tgaagctgtg cgccatgagc cccaagtact atttccagga 3361 gggctggaac atcttcgact tcatcatcgt ggccctgtcg cttttggagc tgggtctcga 3421 gggcgtccag ggcctgtccg tcttgcgttc gtttcgattg ctgcgtgtat ttaaattggc 3481 caaatcttgg ccaacactta atttactcat ttcgattatg ggacgcacca tgggcgcttt 3541 gggtaatctg acatttgtac tttgcattat catcttcatc tttgcggtga tgggaatgca 3601 actgttcgga aagaattatc atgatcacaa ggaccgtttc ccggatggcg acctgccgcg 3661 ctggaacttc accgacttta tgcacagctt catgatcgtg ttccgggtgc tctgcggcga 3721 atggatcgag tccatgtggg actgtatgta cgtgggcgat gtctcgtgca ttcccttctt 3781 cttggccacc gttgtcatcg gcaatcttgt ggtacttaac cttttcttag ccttgctttt 3841 gtccaatttt ggctcatcta gcttatcagc gccgactgcc gataacgata cgaataaaat 3901 agccgaggcc ttcaatcgaa ttggccgatt taaaagttgg gttaagcgta atattgctga 3961 ttgtttcaag ttaatacgta acaaattgac aaatcaaata agtgatcaac catcaggcaa 4021 aggcgtttgt cgttgtatat ctgcagagca tggtgacaac gaactggagc tggggcacga 4081 cgagatcctc gccgatggcc tgatcaagaa gggaatcaag gagcagacgc aactggaggt 4141 ggccatcggg gatggcatgg agttcacgat acacggcgac atgaagaaca acaagccgaa 4201 gaaatccaaa tatctaaata acgcaacgga cgacgacact gccagcatta actcatatgg 4261 tagccataag aatcgaccat tcaaggacga gagccacaag ggcagcgccg agacgatgga 4321 gggcgaggag aagcgcgacg ccagcaagga ggatttaggt ctcgacgagg aactggacga 4381 ggagggcgaa tgcgaggagg gcccgctcga cggtgatatc attattcatg cacacgacga 4441 ggatatactc gatgaatatc cagctgattg ctgccccgat tcgtactata agaaatttcc 4501 gatcttagcc ggtgacgatg actcgccgtt ctggcaagga tggggcaatt tacgactgaa 4561 aacttttcaa ttaattgaaa ataaatattt tgaaacagct gttatcacta tgattttaat 4621 gagtagctta gctttggcat tagaagatgt acatctgcca caaagaccca tactgcagga 4681 tattttatac tatatggaca gaatatttac ggttatattc ttcttggaaa tgttaatcaa 4741 gtggttggcg ctcggcttca aagtgtactt caccaacgcg tggtgttggc tcgatttcgt 4801 gattgtcatg gtatcgctta tcaacttcgt tgcttcactt gttggagctg gtggtattca 4861 agccttcaag actatgcgaa cgttaagagc actgagacca ctacgtgcca tgtcccgtat 4921 gcagggcatg agggtcgtcg ttaatgcgct ggtacaagct ataccgtcca tcttcaatgt 4981 gctattggtg tgtctaatat tttggctaat ttttgccata atgggtgtac agctttttgc 5041 tggaaaatat tttaagtgcg aggacatgaa cggcacgaag ctcagccacg agatcatacc 5101 aaatcgcaat gcctgcgaga gcgagaacta cacgtgggtg aattcagcaa tgaatttcga 5161 tcatgtaggt aacgcgtatc tgtgcctttt ccaagtggcc accttcaaag gctggataca 5221 aataatgaac gatgctatcg attcacgaga ggtggacaag caaccaattc gtgaaacgaa 5281 catctacatg tatttatatt tcgtattctt catcatattt ggatcatttt tcacactcaa 5341 tctgttcatt ggtgttatca ttgataattt taatgagcaa aagaaaaaag caggtggatc 5401 attagaaatg ttcatgacag aagatcagaa aaagtactat aatgctatga aaaagatggg 5461 ctctaaaaaa ccattaaaag ccattccaag accaaggtgg cgaccacaag caatagtctt 5521 tgaaatagta accgataaga aattcgatat aatcattatg ttattcattg gtctgaacat 5581 gttcaccatg accctcgatc gttacgatgc gtcggacacg tacaacgcgg tcctagacta 5641 tctcaatgcg atattcgtag ttattttcag ttccgaatgt ctattaaaaa tattcgcttt 5701 acgatatcac tattttattg agccatggaa tttatttgat gtagtagttg tcattttatc 5761 catcttaggt ctcgtactta gcgatattat cgagaagtac ttcgtgtcgc cgaccctgct 5821 ccgagtggtg cgtgtggcga aagtgggtcg agtcctgcga ctggtgaagg gcgccaaggg 5881 catcaggaca ctgctattcg cgttggccat gtcgctgccg gccctcttca acatctgcct 5941 gctgctgttc ctggtcatgt tcatcttcgc catcttcggc atgtcgttct tcatgcacgt 6001 gaaggagaag agcggcatca acgacgtcta caacttcaag acctttggtc agagcatgat 6061 cctgctcttt cagatgtcga cgtcagccgg ttgggatggt gtactggacg ccattatcaa 6121 tgaggaagca tgcgatccac ccgacaacga caaaggctat ccgggcaatt gtggttcagc 6181 gaccgttgga ataacgtttc tcctctcata cctagttata agctttttga tagttattaa 6241 tatgtacatt gctgtcattc tcgagaacta tagtcaggcc accgaggacg tgcaagaggg 6301 tctaaccgac gacgactacg acatgtacta cgagatctgg cagcaattcg atccggaggg 6361 cacccagtat atacgctacg accagctgtc cgaattcctg gacgtgctgg agcccccgct 6421 gcagatccat aagccgaaca agtacaagat catatcgatg gacataccca tctgtcgcgg 6481 cgacctcatg tactgtgtcg acatcctcga cgccctcacg aaagacttct ttgcgcgcaa 6541 gggcaatccg attgaggaga cgggcgagat cggtgagata gccgcccgtc cggacacgga 6601 gggctatgag cccgtctcat cgacgctgtg gcgccagcgg gaggagtact gtgcccgtct 6661 catccagcac gcctggcgga agcacaaggc gcgcggcgag ggcggtggtg gtggtggtgg 6721 gtccttcgag ccggatccgg atcaggtcga tggcgatggt ggtggcgatc cggatgccgg 6781 ggagcctgca aacgacgaac cggcggatgg gatggctgag gcccccgcag gaggaggagg 6841 aggaggagga ggaggagatg gtagtgttaa tggtggagga actggaactg gaactggaga 6901 cggagctgcc gatgctgccg acgagagcaa tgtaaatagt ccgggtgagg atgcagcgtc 6961 ggcggcagca ggagcggcga caggagcgac ggcgggaagt cccggggcgg gcagcgccgg 7021 acgacagacc gccgttctcg tggagagcga cgggttcgtg acgaagaacg gccacaaggt 7081 ggtcatccac tcgcgatcgc cgagcatcac gtcgcgcacg gcggatgtct gagccaggcc 7141 tcgccccccc ctccaagatg cacgcgagta ttagcatgag tacgtgttgg atgttgcatg 7201 ttgcgtgttg cgcgttgggt gcttaaccaa tccagtgcgt catgtgcaac taaacagtga 7261 gctaacaaca acagcgaaca aggcgaacaa caagcataat tttctgctat atataatgaa 7321 agtacaccat acaacaaaac aatcgaaaca aaccaacaac agtaacaaca tcatcaagag 7381 aacaaccaca acaacaacag taacaacaat cgatgaaata acgaagaaga acaacaacaa 7441 caccagtgta atgtctttga gttacaaaac atacatacat acatatacat actatatatt 7501 tgtatacccg cattattcag ttaacgagtc agcaaccaac aacaatcata cttaagctaa 7561 acaaccgaaa tgtcgaaata ttttgtaagc agctcgtagt ccaatccatt taggcgtttt 7621 ttccaaacca aacaatttgc ctaagcaggt ggaagaagaa gtaaaacatc aacacaccca 7681 cactagagct tgaaaatgat cgataaatac cgattcgata atatcgatgt tttcaaggca 7741 aaacacatat ttaatatcga gaaagtgcaa actgtcgata ttttccaagc tctaacatac 7801 acacaaaacc cacacacaac acactcacac ataaccataa acaaatataa tcccaaaaaa 7861 caaaaaacca aaaccgataa caaagttaaa gaacgatgaa caagctctaa aaattgtatt 7921 tgccagtagt gggacaacaa acaacacgct tgatttaatt aactaccaaa c