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LOCUS XM_017144160 7977 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X19, mRNA. ACCESSION XM_017144160 VERSION XM_017144160.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144160.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7977 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7977 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 10 Proteins" /db_xref="GeneID:108059094" CDS 785..7138 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X19" /protein_id="XP_016999649.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNVL TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMI MPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTM GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL MGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNIS GAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGP WHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKA AKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKM SIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYT IRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNL GSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTT CLDTNHKLEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQA AGRHSRASDRGEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKLQEWISLIVFD PFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLCAMSPK YYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIM GRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNFTDFMHSFM IVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLS APTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGKGVCRCIS AEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKYL NNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEGE CEEGPLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKT FQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLI KWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRAM SRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLS HEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDK QPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKK YYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYD ASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVLS DIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFLV MFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEA CDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEGL TDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICR GDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTLWRQREEYC ARLIQHAWRKHKARGEGGGGGGGSFEPDPDQVDGDGGGDPDAGEPANDEPADGMAEAP AGGGGGGGGGDGSVNGGGTGTGTGDGAADAADESNVNSPGEDAASAAAGAATGATAGS PGAGSAGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV" misc_feature 1205..2059 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2414..2971 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3176..3811 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3887..4576 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 4586..5401 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5369..5527 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5414..5425 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5549..6301 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6332..6475 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acacgcgctg cggcagctga cagtttcagt aaaccacgga gacgaacgga ttacggctct 61 gggaacaaaa cgcaacgttt gatgaaaatt tttggcaact cgtcgcgtcg tcttggttgt 121 tgttaaccac atcctgctaa cgccaaagtc cgaaaataaa attcaaccca aatacccaaa 181 aataacacag atcaaacaaa caaagcaaaa aaaaagcaaa caaaataaca aaaaaaaacc 241 aaaaaaaaaa acaaacaaaa aattcatctt ctacttgttc taccgcttca actttattcg 301 tcttcgtctc cgtaataaat atataaaaag tatatacata tatatatata tatatatgca 361 tatgtgtgtg agtgcgtcgc gtgtgtgttg gtgcctgtaa atgtgtgagc cacaacaaca 421 acaacagcag cagcagccag agccagagca acaaccacag cagcagcaac aacaacaaca 481 acaacagtag ttaacagcag caacaattct tagcagcaat aacaatacaa gcaagcacca 541 ccacaacaac aagagcagca acaacaccaa aaacagccac aatagcaatc acaataacaa 601 catcaaagga tagagcgagc agccaagcac aacatcgatt gacatcgatt aacgcatcgt 661 gctaagcggc gggcgctaat cgaacatggc gcctcggata tagttgtagc tttaatgtag 721 caggcgacat ccatgtgcct catgccttgg aaatctaagg ctctcatcgt tggccgcata 781 gacaatgaca gaagattccg actcgatatc tgaggaagaa cgcagtttgt tccgtccctt 841 tacccgcgaa tcattggtgc aaatcgaaca acgcattgcc gctgaacatg aaaagcagaa 901 ggagctggaa agaaagagag ccgagggaga ggtgatccga tatgatgacg aggacgagga 961 tgaaggtcca caaccggatc ctacacttga acagggtgtg ccaatacctg ttcgattgca 1021 gggcagcttc ccgccggaat tggcctccac tcctctcgag gatatcgatc ccttctacag 1081 caatgtactg acattcgtag ttgtaagcaa aggaaaagat atttttcgct tttctgcatc 1141 aaaagcaatg tggatgctcg atccattcaa tccgatacgt cgtgtggcca tttacattct 1201 agtgcatcca ttattttccc tattcatcat caccacaatt ctcgtcaact gcatcctgat 1261 gataatgccg acaacgccca cggttgagtc cactgaggtg atattcaccg gaatctacac 1321 atttgaatca gctgttaaag tgatggcacg aggtttcatt ttatgcccgt ttacgtatct 1381 tagagatgca tggaattggc tggacttcgt agtaatagct ttagcttatg tgaccatggg 1441 tatagattta ggtaatctag cagccttgcg aacgtttagg gtgctgcgag cgcttaaaac 1501 cgtagccatt gtgccaggct tgaagaccat cgtcggcgcc gtcatcgaat cggtgaagaa 1561 tctgcgcgat gtgataatcc tcaccatgtt ctccctgtcg gtcttcgcgc tgatgggcct 1621 gcagatctac atgggcgtgc tcacgcagaa gtgcatcaag aagttcccgc tggacggctc 1681 ctggggcaat ctgaccgacg agaactggga ctatcacaat cgcaacagct ccaattggta 1741 ctcggaggac gagggcatct catttccgct gtgcggcaat atatccggcg cggggcaatg 1801 cgacgatgac tacgtgtgtc tgcaggggtt tgggccgaat ccgaactacg gctacaccag 1861 cttcgattca ttcggctggg ccttcctgtc cgccttccgg ctgatgacac aggacttctg 1921 ggaggacctc taccagctgg tgttgcgcgc cgccggacca tggcacatgc tgttctttat 1981 agtcatcatc ttcctaggtt cattctatct tgtgaatttg attttggcca ttgttgccat 2041 gtcgtatgac gaattgcaaa agaaggccga agaagaagag gctgccgaag aggaggcgat 2101 acgtgaagcg gaggaggctg ccgccgccaa agctgccaag ctggaggagc gggccaatgc 2161 gcaggctcag gcagcagcgg atgcggctgc cgccgaagag gctgcactgc atccggagat 2221 ggccaagagt ccgacgtatt cgtgcatcag ctatgagctt ttcgttggcg gcgagaaggg 2281 caacgatgac aacaacaagg agaagatgtc cattcgcagc gtcgaggtgg agtcggagtc 2341 ggtgagcgtt atacaaagac aaccagcacc taccacagca caccaagcta ccaaagttcg 2401 taaagtgagc acgacatcct tatccttacc tggttcaccg tttaacatac gcaggggatc 2461 acgtagttct cacaagtaca cgatacggaa cggacgtggc cgctttggta tacccggtag 2521 cgatcgcaag ccgttggtat tgtcaacata tcaggatgcc cagcagcact tgccctatgc 2581 cgacgactcg aatgccgtca ccccgatgtc cgaggagaac ggggccatca tagtgcccgt 2641 gtactatggc aacctaggct ctcggcactc atcgtatacc tcgcatcagt cccgaatatc 2701 gtatacctca catggcgatc tactcggcgg catggccgtc atgggcgtca gcacaatgac 2761 caaggagagc aaattgcgca accgcaacac acgcaatcaa tcagtgggcg ccaccaatgg 2821 cggcaccacc tgcctggaca ccaatcacaa gctcgagcat cgcgactacg aaatcggtct 2881 ggagtgcacg gacgaagctg gcaagattaa acatcatgac aatcctttta tcgagcccgt 2941 ccagacacaa acggtggtcg acatgaaaga tgtgatggtc ctgaatgaca tcatcgaaca 3001 ggccgctggt cggcacagtc gggcaagcga tcgcggtgag gacgatgacg aggacgggcc 3061 gacgttcaaa gacaaggcac tcgaagtgat cctaaagggc atcgatgtgt tttgtgtgtg 3121 ggactgttgc tgggtttggt tgaaattgca ggagtggatc tcgctgatcg tcttcgatcc 3181 cttcgtcgag ctcttcatca cgctgtgcat tgtggtcaac acgatgttca tggcgatgga 3241 tcaccacgat atgaacaagg agatggagcg cgtgctcaag agtggcaact atttcttcac 3301 ggccaccttt gccatcgagg ccaccatgaa gctgtgcgcc atgagcccca agtactattt 3361 ccaggagggc tggaacatct tcgacttcat catcgtggcc ctgtcgcttt tggagctggg 3421 tctcgagggc gtccagggcc tgtccgtctt gcgttcgttt cgattgctgc gtgtatttaa 3481 attggccaaa tcttggccaa cacttaattt actcatttcg attatgggac gcaccatggg 3541 cgctttgggt aatctgacat ttgtactttg cattatcatc ttcatctttg cggtgatggg 3601 aatgcaactg ttcggaaaga attatcatga tcacaaggac cgtttcccgg atggcgacct 3661 gccgcgctgg aacttcaccg actttatgca cagcttcatg atcgtgttcc gggtgctctg 3721 cggcgaatgg atcgagtcca tgtgggactg tatgtacgtg ggcgatgtct cgtgcattcc 3781 cttcttcttg gccaccgttg tcatcggcaa tcttgtggta cttaaccttt tcttagcctt 3841 gcttttgtcc aattttggct catctagctt atcagcgccg actgccgata acgatacgaa 3901 taaaatagcc gaggccttca atcgaattgg ccgatttaaa agttgggtta agcgtaatat 3961 tgctgattgt ttcaagttaa tacgtaacaa attgacaaat caaataagtg atcaaccatc 4021 aggcaaaggc gtttgtcgtt gtatatctgc agagcatggt gacaacgaac tggagctggg 4081 gcacgacgag atcctcgccg atggcctgat caagaaggga atcaaggagc agacgcaact 4141 ggaggtggcc atcggggatg gcatggagtt cacgatacac ggcgacatga agaacaacaa 4201 gccgaagaaa tccaaatatc taaataacgc aacggacgac gacactgcca gcattaactc 4261 atatggtagc cataagaatc gaccattcaa ggacgagagc cacaagggca gcgccgagac 4321 gatggagggc gaggagaagc gcgacgccag caaggaggat ttaggtctcg acgaggaact 4381 ggacgaggag ggcgaatgcg aggagggccc gctcgacggt gatatcatta ttcatgcaca 4441 cgacgaggat atactcgatg aatatccagc tgattgctgc cccgattcgt actataagaa 4501 atttccgatc ttagccggtg acgatgactc gccgttctgg caaggatggg gcaatttacg 4561 actgaaaact tttcaattaa ttgaaaataa atattttgaa acagctgtta tcactatgat 4621 tttaatgagt agcttagctt tggcattaga agatgtacat ctgccacaaa gacccatact 4681 gcaggatatt ttatactata tggacagaat atttacggtt atattcttct tggaaatgtt 4741 aatcaagtgg ttggcgctcg gcttcaaagt gtacttcacc aacgcgtggt gttggctcga 4801 tttcgtgatt gtcatggtat cgcttatcaa cttcgttgct tcacttgttg gagctggtgg 4861 tattcaagcc ttcaagacta tgcgaacgtt aagagcactg agaccactac gtgccatgtc 4921 ccgtatgcag ggcatgaggg tcgtcgttaa tgcgctggta caagctatac cgtccatctt 4981 caatgtgcta ttggtgtgtc taatattttg gctaattttt gccataatgg gtgtacagct 5041 ttttgctgga aaatatttta agtgcgagga catgaacggc acgaagctca gccacgagat 5101 cataccaaat cgcaatgcct gcgagagcga gaactacacg tgggtgaatt cagcaatgaa 5161 tttcgatcat gtaggtaacg cgtatctgtg ccttttccaa gtggccacct tcaaaggctg 5221 gatacaaata atgaacgatg ctatcgattc acgagaggtg gacaagcaac caattcgtga 5281 aacgaacatc tacatgtatt tatatttcgt attcttcatc atatttggat catttttcac 5341 actcaatctg ttcattggtg ttatcattga taattttaat gagcaaaaga aaaaagcagg 5401 tggatcatta gaaatgttca tgacagaaga tcagaaaaag tactataatg ctatgaaaaa 5461 gatgggctct aaaaaaccat taaaagccat tccaagacca aggtggcgac cacaagcaat 5521 agtctttgaa atagtaaccg ataagaaatt cgatataatc attatgttat tcattggtct 5581 gaacatgttc accatgaccc tcgatcgtta cgatgcgtcg gacacgtaca acgcggtcct 5641 agactatctc aatgcgatat tcgtagttat tttcagttcc gaatgtctat taaaaatatt 5701 cgctttacga tatcactatt ttattgagcc atggaattta tttgatgtag tagttgtcat 5761 tttatccatc ttaggtctcg tacttagcga tattatcgag aagtacttcg tgtcgccgac 5821 cctgctccga gtggtgcgtg tggcgaaagt gggtcgagtc ctgcgactgg tgaagggcgc 5881 caagggcatc aggacactgc tattcgcgtt ggccatgtcg ctgccggccc tcttcaacat 5941 ctgcctgctg ctgttcctgg tcatgttcat cttcgccatc ttcggcatgt cgttcttcat 6001 gcacgtgaag gagaagagcg gcatcaacga cgtctacaac ttcaagacct ttggtcagag 6061 catgatcctg ctctttcaga tgtcgacgtc agccggttgg gatggtgtac tggacgccat 6121 tatcaatgag gaagcatgcg atccacccga caacgacaaa ggctatccgg gcaattgtgg 6181 ttcagcgacc gttggaataa cgtttctcct ctcataccta gttataagct ttttgatagt 6241 tattaatatg tacattgctg tcattctcga gaactatagt caggccaccg aggacgtgca 6301 agagggtcta accgacgacg actacgacat gtactacgag atctggcagc aattcgatcc 6361 ggagggcacc cagtatatac gctacgacca gctgtccgaa ttcctggacg tgctggagcc 6421 cccgctgcag atccataagc cgaacaagta caagatcata tcgatggaca tacccatctg 6481 tcgcggcgac ctcatgtact gtgtcgacat cctcgacgcc ctcacgaaag acttctttgc 6541 gcgcaagggc aatccgattg aggagacggg cgagatcggt gagatagccg cccgtccgga 6601 cacggagggc tatgagcccg tctcatcgac gctgtggcgc cagcgggagg agtactgtgc 6661 ccgtctcatc cagcacgcct ggcggaagca caaggcgcgc ggcgagggcg gtggtggtgg 6721 tggtgggtcc ttcgagccgg atccggatca ggtcgatggc gatggtggtg gcgatccgga 6781 tgccggggag cctgcaaacg acgaaccggc ggatgggatg gctgaggccc ccgcaggagg 6841 aggaggagga ggaggaggag gagatggtag tgttaatggt ggaggaactg gaactggaac 6901 tggagacgga gctgccgatg ctgccgacga gagcaatgta aatagtccgg gtgaggatgc 6961 agcgtcggcg gcagcaggag cggcgacagg agcgacggcg ggaagtcccg gggcgggcag 7021 cgccggacga cagaccgccg ttctcgtgga gagcgacggg ttcgtgacga agaacggcca 7081 caaggtggtc atccactcgc gatcgccgag catcacgtcg cgcacggcgg atgtctgagc 7141 caggcctcgc ccccccctcc aagatgcacg cgagtattag catgagtacg tgttggatgt 7201 tgcatgttgc gtgttgcgcg ttgggtgctt aaccaatcca gtgcgtcatg tgcaactaaa 7261 cagtgagcta acaacaacag cgaacaaggc gaacaacaag cataattttc tgctatatat 7321 aatgaaagta caccatacaa caaaacaatc gaaacaaacc aacaacagta acaacatcat 7381 caagagaaca accacaacaa caacagtaac aacaatcgat gaaataacga agaagaacaa 7441 caacaacacc agtgtaatgt ctttgagtta caaaacatac atacatacat atacatacta 7501 tatatttgta tacccgcatt attcagttaa cgagtcagca accaacaaca atcatactta 7561 agctaaacaa ccgaaatgtc gaaatatttt gtaagcagct cgtagtccaa tccatttagg 7621 cgttttttcc aaaccaaaca atttgcctaa gcaggtggaa gaagaagtaa aacatcaaca 7681 cacccacact agagcttgaa aatgatcgat aaataccgat tcgataatat cgatgttttc 7741 aaggcaaaac acatatttaa tatcgagaaa gtgcaaactg tcgatatttt ccaagctcta 7801 acatacacac aaaacccaca cacaacacac tcacacataa ccataaacaa atataatccc 7861 aaaaaacaaa aaaccaaaac cgataacaaa gttaaagaac gatgaacaag ctctaaaaat 7921 tgtatttgcc agtagtggga caacaaacaa cacgcttgat ttaattaact accaaac