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LOCUS XM_017144159 7980 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X18, mRNA. ACCESSION XM_017144159 VERSION XM_017144159.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144159.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7980 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7980 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins" /db_xref="GeneID:108059094" CDS 785..7141 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X18" /protein_id="XP_016999648.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL EDIDPFYSNVLTFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFII TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDE GISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNI RRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENG AIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRN QSVGATNGGTTCLDTNHKLEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKD VMVLNDIIEQAAGRHSRASDRGEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLK LQEWISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIE ATMKLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKS WPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPR WNFTDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLAL LLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQ PSEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKY LNNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLDEELDEEG ECEEGPLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLK TFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTVIFFLEML IKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLRALRPLRA MSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKL SHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDAIDSREVD KQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQK KYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRY DASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVILSILGLVL SDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFNICLLLFL VMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVLDAIINEE ACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQATEDVQEG LTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKIISMDIPIC RGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTLWRQREEY CARLIQHAWRKHKARGEGGGGGGGSFEPDPDQVDGDGGGDPDAGEPANDEPADGMAEA PAGGGGGGGGGDGSVNGGGTGTGTGDGAADAADESNVNSPGEDAASAAAGAATGATAG SPGAGSAGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV" misc_feature 1238..2092 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2447..3004 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3209..3844 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3920..4579 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 4589..5404 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5372..5530 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5417..5428 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5552..6304 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6335..6478 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acacgcgctg cggcagctga cagtttcagt aaaccacgga gacgaacgga ttacggctct 61 gggaacaaaa cgcaacgttt gatgaaaatt tttggcaact cgtcgcgtcg tcttggttgt 121 tgttaaccac atcctgctaa cgccaaagtc cgaaaataaa attcaaccca aatacccaaa 181 aataacacag atcaaacaaa caaagcaaaa aaaaagcaaa caaaataaca aaaaaaaacc 241 aaaaaaaaaa acaaacaaaa aattcatctt ctacttgttc taccgcttca actttattcg 301 tcttcgtctc cgtaataaat atataaaaag tatatacata tatatatata tatatatgca 361 tatgtgtgtg agtgcgtcgc gtgtgtgttg gtgcctgtaa atgtgtgagc cacaacaaca 421 acaacagcag cagcagccag agccagagca acaaccacag cagcagcaac aacaacaaca 481 acaacagtag ttaacagcag caacaattct tagcagcaat aacaatacaa gcaagcacca 541 ccacaacaac aagagcagca acaacaccaa aaacagccac aatagcaatc acaataacaa 601 catcaaagga tagagcgagc agccaagcac aacatcgatt gacatcgatt aacgcatcgt 661 gctaagcggc gggcgctaat cgaacatggc gcctcggata tagttgtagc tttaatgtag 721 caggcgacat ccatgtgcct catgccttgg aaatctaagg ctctcatcgt tggccgcata 781 gacaatgaca gaagattccg actcgatatc tgaggaagaa cgcagtttgt tccgtccctt 841 tacccgcgaa tcattggtgc aaatcgaaca acgcattgcc gctgaacatg aaaagcagaa 901 ggagctggaa agaaagagag ccgagggaga ggtgccgcaa tatggtcgca agaaaaaaca 961 aaaagaaatc cgatatgatg acgaggacga ggatgaaggt ccacaaccgg atcctacact 1021 tgaacagggt gtgccaatac ctgttcgatt gcagggcagc ttcccgccgg aattggcctc 1081 cactcctctc gaggatatcg atcccttcta cagcaatgta ctgacattcg tagttgtaag 1141 caaaggaaaa gatatttttc gcttttctgc atcaaaagca atgtggatgc tcgatccatt 1201 caatccgata cgtcgtgtgg ccatttacat tctagtgcat ccattatttt ccctattcat 1261 catcaccaca attctcgtca actgcatcct gatgataatg ccgacaacgc ccacggttga 1321 gtccactgag gtgatattca ccggaatcta cacatttgaa tcagctgtta aagtgatggc 1381 acgaggtttc attttatgcc cgtttacgta tcttagagat gcatggaatt ggctggactt 1441 cgtagtaata gctttagctt atgtgaccat gggtatagat ttaggtaatc tagcagcctt 1501 gcgaacgttt agggtgctgc gagcgcttaa aaccgtagcc attgtgccag gcttgaagac 1561 catcgtcggc gccgtcatcg aatcggtgaa gaatctgcgc gatgtgataa tcctcaccat 1621 gttctccctg tcggtcttcg cgctgatggg cctgcagatc tacatgggcg tgctcacgca 1681 gaagtgcatc aagaagttcc cgctggacgg ctcctggggc aatctgaccg acgagaactg 1741 ggactatcac aatcgcaaca gctccaattg gtactcggag gacgagggca tctcatttcc 1801 gctgtgcggc aatatatccg gcgcggggca atgcgacgat gactacgtgt gtctgcaggg 1861 gtttgggccg aatccgaact acggctacac cagcttcgat tcattcggct gggccttcct 1921 gtccgccttc cggctgatga cacaggactt ctgggaggac ctctaccagc tggtgttgcg 1981 cgccgccgga ccatggcaca tgctgttctt tatagtcatc atcttcctag gttcattcta 2041 tcttgtgaat ttgattttgg ccattgttgc catgtcgtat gacgaattgc aaaagaaggc 2101 cgaagaagaa gaggctgccg aagaggaggc gatacgtgaa gcggaggagg ctgccgccgc 2161 caaagctgcc aagctggagg agcgggccaa tgcgcaggct caggcagcag cggatgcggc 2221 tgccgccgaa gaggctgcac tgcatccgga gatggccaag agtccgacgt attcgtgcat 2281 cagctatgag cttttcgttg gcggcgagaa gggcaacgat gacaacaaca aggagaagat 2341 gtccattcgc agcgtcgagg tggagtcgga gtcggtgagc gttatacaaa gacaaccagc 2401 acctaccaca gcacaccaag ctaccaaagt tcgtaaagtg agcacgacat ccttatcctt 2461 acctggttca ccgtttaaca tacgcagggg atcacgtagt tctcacaagt acacgatacg 2521 gaacggacgt ggccgctttg gtatacccgg tagcgatcgc aagccgttgg tattgtcaac 2581 atatcaggat gcccagcagc acttgcccta tgccgacgac tcgaatgccg tcaccccgat 2641 gtccgaggag aacggggcca tcatagtgcc cgtgtactat ggcaacctag gctctcggca 2701 ctcatcgtat acctcgcatc agtcccgaat atcgtatacc tcacatggcg atctactcgg 2761 cggcatggcc gtcatgggcg tcagcacaat gaccaaggag agcaaattgc gcaaccgcaa 2821 cacacgcaat caatcagtgg gcgccaccaa tggcggcacc acctgcctgg acaccaatca 2881 caagctcgag catcgcgact acgaaatcgg tctggagtgc acggacgaag ctggcaagat 2941 taaacatcat gacaatcctt ttatcgagcc cgtccagaca caaacggtgg tcgacatgaa 3001 agatgtgatg gtcctgaatg acatcatcga acaggccgct ggtcggcaca gtcgggcaag 3061 cgatcgcggt gaggacgatg acgaggacgg gccgacgttc aaagacaagg cactcgaagt 3121 gatcctaaag ggcatcgatg tgttttgtgt gtgggactgt tgctgggttt ggttgaaatt 3181 gcaggagtgg atctcgctga tcgtcttcga tcccttcgtc gagctcttca tcacgctgtg 3241 cattgtggtc aacacgatgt tcatggcgat ggatcaccac gatatgaaca aggagatgga 3301 gcgcgtgctc aagagtggca actatttctt cacggccacc tttgccatcg aggccaccat 3361 gaagctgtgc gccatgagcc ccaagtacta tttccaggag ggctggaaca tcttcgactt 3421 catcatcgtg gccctgtcgc ttttggagct gggtctcgag ggcgtccagg gcctgtccgt 3481 cttgcgttcg tttcgattgc tgcgtgtatt taaattggcc aaatcttggc caacacttaa 3541 tttactcatt tcgattatgg gacgcaccat gggcgctttg ggtaatctga catttgtact 3601 ttgcattatc atcttcatct ttgcggtgat gggaatgcaa ctgttcggaa agaattatca 3661 tgatcacaag gaccgtttcc cggatggcga cctgccgcgc tggaacttca ccgactttat 3721 gcacagcttc atgatcgtgt tccgggtgct ctgcggcgaa tggatcgagt ccatgtggga 3781 ctgtatgtac gtgggcgatg tctcgtgcat tcccttcttc ttggccaccg ttgtcatcgg 3841 caatcttgtg gtacttaacc ttttcttagc cttgcttttg tccaattttg gctcatctag 3901 cttatcagcg ccgactgccg ataacgatac gaataaaata gccgaggcct tcaatcgaat 3961 tggccgattt aaaagttggg ttaagcgtaa tattgctgat tgtttcaagt taatacgtaa 4021 caaattgaca aatcaaataa gtgatcaacc atcagagcat ggtgacaacg aactggagct 4081 ggggcacgac gagatcctcg ccgatggcct gatcaagaag ggaatcaagg agcagacgca 4141 actggaggtg gccatcgggg atggcatgga gttcacgata cacggcgaca tgaagaacaa 4201 caagccgaag aaatccaaat atctaaataa cgcaacggac gacgacactg ccagcattaa 4261 ctcatatggt agccataaga atcgaccatt caaggacgag agccacaagg gcagcgccga 4321 gacgatggag ggcgaggaga agcgcgacgc cagcaaggag gatttaggtc tcgacgagga 4381 actggacgag gagggcgaat gcgaggaggg cccgctcgac ggtgatatca ttattcatgc 4441 acacgacgag gatatactcg atgaatatcc agctgattgc tgccccgatt cgtactataa 4501 gaaatttccg atcttagccg gtgacgatga ctcgccgttc tggcaaggat ggggcaattt 4561 acgactgaaa acttttcaat taattgaaaa taaatatttt gaaacagctg ttatcactat 4621 gattttaatg agtagcttag ctttggcatt agaagatgta catctgccac aaagacccat 4681 actgcaggat attttatact atatggacag aatatttacg gttatattct tcttggaaat 4741 gttaatcaag tggttggcgc tcggcttcaa agtgtacttc accaacgcgt ggtgttggct 4801 cgatttcgtg attgtcatgg tatcgcttat caacttcgtt gcttcacttg ttggagctgg 4861 tggtattcaa gccttcaaga ctatgcgaac gttaagagca ctgagaccac tacgtgccat 4921 gtcccgtatg cagggcatga gggtcgtcgt taatgcgctg gtacaagcta taccgtccat 4981 cttcaatgtg ctattggtgt gtctaatatt ttggctaatt tttgccataa tgggtgtaca 5041 gctttttgct ggaaaatatt ttaagtgcga ggacatgaac ggcacgaagc tcagccacga 5101 gatcatacca aatcgcaatg cctgcgagag cgagaactac acgtgggtga attcagcaat 5161 gaatttcgat catgtaggta acgcgtatct gtgccttttc caagtggcca ccttcaaagg 5221 ctggatacaa ataatgaacg atgctatcga ttcacgagag gtggacaagc aaccaattcg 5281 tgaaacgaac atctacatgt atttatattt cgtattcttc atcatatttg gatcattttt 5341 cacactcaat ctgttcattg gtgttatcat tgataatttt aatgagcaaa agaaaaaagc 5401 aggtggatca ttagaaatgt tcatgacaga agatcagaaa aagtactata atgctatgaa 5461 aaagatgggc tctaaaaaac cattaaaagc cattccaaga ccaaggtggc gaccacaagc 5521 aatagtcttt gaaatagtaa ccgataagaa attcgatata atcattatgt tattcattgg 5581 tctgaacatg ttcaccatga ccctcgatcg ttacgatgcg tcggacacgt acaacgcggt 5641 cctagactat ctcaatgcga tattcgtagt tattttcagt tccgaatgtc tattaaaaat 5701 attcgcttta cgatatcact attttattga gccatggaat ttatttgatg tagtagttgt 5761 cattttatcc atcttaggtc tcgtacttag cgatattatc gagaagtact tcgtgtcgcc 5821 gaccctgctc cgagtggtgc gtgtggcgaa agtgggtcga gtcctgcgac tggtgaaggg 5881 cgccaagggc atcaggacac tgctattcgc gttggccatg tcgctgccgg ccctcttcaa 5941 catctgcctg ctgctgttcc tggtcatgtt catcttcgcc atcttcggca tgtcgttctt 6001 catgcacgtg aaggagaaga gcggcatcaa cgacgtctac aacttcaaga cctttggtca 6061 gagcatgatc ctgctctttc agatgtcgac gtcagccggt tgggatggtg tactggacgc 6121 cattatcaat gaggaagcat gcgatccacc cgacaacgac aaaggctatc cgggcaattg 6181 tggttcagcg accgttggaa taacgtttct cctctcatac ctagttataa gctttttgat 6241 agttattaat atgtacattg ctgtcattct cgagaactat agtcaggcca ccgaggacgt 6301 gcaagagggt ctaaccgacg acgactacga catgtactac gagatctggc agcaattcga 6361 tccggagggc acccagtata tacgctacga ccagctgtcc gaattcctgg acgtgctgga 6421 gcccccgctg cagatccata agccgaacaa gtacaagatc atatcgatgg acatacccat 6481 ctgtcgcggc gacctcatgt actgtgtcga catcctcgac gccctcacga aagacttctt 6541 tgcgcgcaag ggcaatccga ttgaggagac gggcgagatc ggtgagatag ccgcccgtcc 6601 ggacacggag ggctatgagc ccgtctcatc gacgctgtgg cgccagcggg aggagtactg 6661 tgcccgtctc atccagcacg cctggcggaa gcacaaggcg cgcggcgagg gcggtggtgg 6721 tggtggtggg tccttcgagc cggatccgga tcaggtcgat ggcgatggtg gtggcgatcc 6781 ggatgccggg gagcctgcaa acgacgaacc ggcggatggg atggctgagg cccccgcagg 6841 aggaggagga ggaggaggag gaggagatgg tagtgttaat ggtggaggaa ctggaactgg 6901 aactggagac ggagctgccg atgctgccga cgagagcaat gtaaatagtc cgggtgagga 6961 tgcagcgtcg gcggcagcag gagcggcgac aggagcgacg gcgggaagtc ccggggcggg 7021 cagcgccgga cgacagaccg ccgttctcgt ggagagcgac gggttcgtga cgaagaacgg 7081 ccacaaggtg gtcatccact cgcgatcgcc gagcatcacg tcgcgcacgg cggatgtctg 7141 agccaggcct cgcccccccc tccaagatgc acgcgagtat tagcatgagt acgtgttgga 7201 tgttgcatgt tgcgtgttgc gcgttgggtg cttaaccaat ccagtgcgtc atgtgcaact 7261 aaacagtgag ctaacaacaa cagcgaacaa ggcgaacaac aagcataatt ttctgctata 7321 tataatgaaa gtacaccata caacaaaaca atcgaaacaa accaacaaca gtaacaacat 7381 catcaagaga acaaccacaa caacaacagt aacaacaatc gatgaaataa cgaagaagaa 7441 caacaacaac accagtgtaa tgtctttgag ttacaaaaca tacatacata catatacata 7501 ctatatattt gtatacccgc attattcagt taacgagtca gcaaccaaca acaatcatac 7561 ttaagctaaa caaccgaaat gtcgaaatat tttgtaagca gctcgtagtc caatccattt 7621 aggcgttttt tccaaaccaa acaatttgcc taagcaggtg gaagaagaag taaaacatca 7681 acacacccac actagagctt gaaaatgatc gataaatacc gattcgataa tatcgatgtt 7741 ttcaaggcaa aacacatatt taatatcgag aaagtgcaaa ctgtcgatat tttccaagct 7801 ctaacataca cacaaaaccc acacacaaca cactcacaca taaccataaa caaatataat 7861 cccaaaaaac aaaaaaccaa aaccgataac aaagttaaag aacgatgaac aagctctaaa 7921 aattgtattt gccagtagtg ggacaacaaa caacacgctt gatttaatta actaccaaac