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LOCUS XM_017144158 8001 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X17, mRNA. ACCESSION XM_017144158 VERSION XM_017144158.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144158.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8001 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8001 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins" /db_xref="GeneID:108059094" CDS 785..7162 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X17" /protein_id="XP_016999647.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNVL TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMI MPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTM GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL MGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNIS GAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGP WHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKA AKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKM SIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYT IRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNL GSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTT CLDTNHKLEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQA AGRHSRASDRGVSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKLQE WISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATM KLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPT LNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNF TDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLS NFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSG KGVCRCISAEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNN KPKKSKYLNNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGLD EELDEEGECEEGPLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQG WGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFTV IFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTLR ALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKCE DMNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMNDA IDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLEM FMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIGLNMF TMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVIL SILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALFN ICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGVL DAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQA TEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKII SMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSSTL WRQREEYCARLIQHAWRKHKARGEGGGGGGGSFEPDPDQVDGDGGGDPDAGEPANDEP ADGMAEAPAGGGGGGGGGDGSVNGGGTGTGTGDGAADAADESNVNSPGEDAASAAAGA ATGATAGSPGAGSAGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV" misc_feature 1205..2059 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2414..2971 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3200..3835 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3911..4600 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 4610..5425 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5393..5551 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5438..5449 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5573..6325 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6356..6499 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acacgcgctg cggcagctga cagtttcagt aaaccacgga gacgaacgga ttacggctct 61 gggaacaaaa cgcaacgttt gatgaaaatt tttggcaact cgtcgcgtcg tcttggttgt 121 tgttaaccac atcctgctaa cgccaaagtc cgaaaataaa attcaaccca aatacccaaa 181 aataacacag atcaaacaaa caaagcaaaa aaaaagcaaa caaaataaca aaaaaaaacc 241 aaaaaaaaaa acaaacaaaa aattcatctt ctacttgttc taccgcttca actttattcg 301 tcttcgtctc cgtaataaat atataaaaag tatatacata tatatatata tatatatgca 361 tatgtgtgtg agtgcgtcgc gtgtgtgttg gtgcctgtaa atgtgtgagc cacaacaaca 421 acaacagcag cagcagccag agccagagca acaaccacag cagcagcaac aacaacaaca 481 acaacagtag ttaacagcag caacaattct tagcagcaat aacaatacaa gcaagcacca 541 ccacaacaac aagagcagca acaacaccaa aaacagccac aatagcaatc acaataacaa 601 catcaaagga tagagcgagc agccaagcac aacatcgatt gacatcgatt aacgcatcgt 661 gctaagcggc gggcgctaat cgaacatggc gcctcggata tagttgtagc tttaatgtag 721 caggcgacat ccatgtgcct catgccttgg aaatctaagg ctctcatcgt tggccgcata 781 gacaatgaca gaagattccg actcgatatc tgaggaagaa cgcagtttgt tccgtccctt 841 tacccgcgaa tcattggtgc aaatcgaaca acgcattgcc gctgaacatg aaaagcagaa 901 ggagctggaa agaaagagag ccgagggaga ggtgatccga tatgatgacg aggacgagga 961 tgaaggtcca caaccggatc ctacacttga acagggtgtg ccaatacctg ttcgattgca 1021 gggcagcttc ccgccggaat tggcctccac tcctctcgag gatatcgatc ccttctacag 1081 caatgtactg acattcgtag ttgtaagcaa aggaaaagat atttttcgct tttctgcatc 1141 aaaagcaatg tggatgctcg atccattcaa tccgatacgt cgtgtggcca tttacattct 1201 agtgcatcca ttattttccc tattcatcat caccacaatt ctcgtcaact gcatcctgat 1261 gataatgccg acaacgccca cggttgagtc cactgaggtg atattcaccg gaatctacac 1321 atttgaatca gctgttaaag tgatggcacg aggtttcatt ttatgcccgt ttacgtatct 1381 tagagatgca tggaattggc tggacttcgt agtaatagct ttagcttatg tgaccatggg 1441 tatagattta ggtaatctag cagccttgcg aacgtttagg gtgctgcgag cgcttaaaac 1501 cgtagccatt gtgccaggct tgaagaccat cgtcggcgcc gtcatcgaat cggtgaagaa 1561 tctgcgcgat gtgataatcc tcaccatgtt ctccctgtcg gtcttcgcgc tgatgggcct 1621 gcagatctac atgggcgtgc tcacgcagaa gtgcatcaag aagttcccgc tggacggctc 1681 ctggggcaat ctgaccgacg agaactggga ctatcacaat cgcaacagct ccaattggta 1741 ctcggaggac gagggcatct catttccgct gtgcggcaat atatccggcg cggggcaatg 1801 cgacgatgac tacgtgtgtc tgcaggggtt tgggccgaat ccgaactacg gctacaccag 1861 cttcgattca ttcggctggg ccttcctgtc cgccttccgg ctgatgacac aggacttctg 1921 ggaggacctc taccagctgg tgttgcgcgc cgccggacca tggcacatgc tgttctttat 1981 agtcatcatc ttcctaggtt cattctatct tgtgaatttg attttggcca ttgttgccat 2041 gtcgtatgac gaattgcaaa agaaggccga agaagaagag gctgccgaag aggaggcgat 2101 acgtgaagcg gaggaggctg ccgccgccaa agctgccaag ctggaggagc gggccaatgc 2161 gcaggctcag gcagcagcgg atgcggctgc cgccgaagag gctgcactgc atccggagat 2221 ggccaagagt ccgacgtatt cgtgcatcag ctatgagctt ttcgttggcg gcgagaaggg 2281 caacgatgac aacaacaagg agaagatgtc cattcgcagc gtcgaggtgg agtcggagtc 2341 ggtgagcgtt atacaaagac aaccagcacc taccacagca caccaagcta ccaaagttcg 2401 taaagtgagc acgacatcct tatccttacc tggttcaccg tttaacatac gcaggggatc 2461 acgtagttct cacaagtaca cgatacggaa cggacgtggc cgctttggta tacccggtag 2521 cgatcgcaag ccgttggtat tgtcaacata tcaggatgcc cagcagcact tgccctatgc 2581 cgacgactcg aatgccgtca ccccgatgtc cgaggagaac ggggccatca tagtgcccgt 2641 gtactatggc aacctaggct ctcggcactc atcgtatacc tcgcatcagt cccgaatatc 2701 gtatacctca catggcgatc tactcggcgg catggccgtc atgggcgtca gcacaatgac 2761 caaggagagc aaattgcgca accgcaacac acgcaatcaa tcagtgggcg ccaccaatgg 2821 cggcaccacc tgcctggaca ccaatcacaa gctcgagcat cgcgactacg aaatcggtct 2881 ggagtgcacg gacgaagctg gcaagattaa acatcatgac aatcctttta tcgagcccgt 2941 ccagacacaa acggtggtcg acatgaaaga tgtgatggtc ctgaatgaca tcatcgaaca 3001 ggccgctggt cggcacagtc gggcaagcga tcgcggtgtc tccgtttact attttccaac 3061 agaggacgat gacgaggacg ggccgacgtt caaagacaag gcactcgaag tgatcctaaa 3121 gggcatcgat gtgttttgtg tgtgggactg ttgctgggtt tggttgaaat tgcaggagtg 3181 gatctcgctg atcgtcttcg atcccttcgt cgagctcttc atcacgctgt gcattgtggt 3241 caacacgatg ttcatggcga tggatcacca cgatatgaac aaggagatgg agcgcgtgct 3301 caagagtggc aactatttct tcacggccac ctttgccatc gaggccacca tgaagctgtg 3361 cgccatgagc cccaagtact atttccagga gggctggaac atcttcgact tcatcatcgt 3421 ggccctgtcg cttttggagc tgggtctcga gggcgtccag ggcctgtccg tcttgcgttc 3481 gtttcgattg ctgcgtgtat ttaaattggc caaatcttgg ccaacactta atttactcat 3541 ttcgattatg ggacgcacca tgggcgcttt gggtaatctg acatttgtac tttgcattat 3601 catcttcatc tttgcggtga tgggaatgca actgttcgga aagaattatc atgatcacaa 3661 ggaccgtttc ccggatggcg acctgccgcg ctggaacttc accgacttta tgcacagctt 3721 catgatcgtg ttccgggtgc tctgcggcga atggatcgag tccatgtggg actgtatgta 3781 cgtgggcgat gtctcgtgca ttcccttctt cttggccacc gttgtcatcg gcaatcttgt 3841 ggtacttaac cttttcttag ccttgctttt gtccaatttt ggctcatcta gcttatcagc 3901 gccgactgcc gataacgata cgaataaaat agccgaggcc ttcaatcgaa ttggccgatt 3961 taaaagttgg gttaagcgta atattgctga ttgtttcaag ttaatacgta acaaattgac 4021 aaatcaaata agtgatcaac catcaggcaa aggcgtttgt cgttgtatat ctgcagagca 4081 tggtgacaac gaactggagc tggggcacga cgagatcctc gccgatggcc tgatcaagaa 4141 gggaatcaag gagcagacgc aactggaggt ggccatcggg gatggcatgg agttcacgat 4201 acacggcgac atgaagaaca acaagccgaa gaaatccaaa tatctaaata acgcaacgga 4261 cgacgacact gccagcatta actcatatgg tagccataag aatcgaccat tcaaggacga 4321 gagccacaag ggcagcgccg agacgatgga gggcgaggag aagcgcgacg ccagcaagga 4381 ggatttaggt ctcgacgagg aactggacga ggagggcgaa tgcgaggagg gcccgctcga 4441 cggtgatatc attattcatg cacacgacga ggatatactc gatgaatatc cagctgattg 4501 ctgccccgat tcgtactata agaaatttcc gatcttagcc ggtgacgatg actcgccgtt 4561 ctggcaagga tggggcaatt tacgactgaa aacttttcaa ttaattgaaa ataaatattt 4621 tgaaacagct gttatcacta tgattttaat gagtagctta gctttggcat tagaagatgt 4681 acatctgcca caaagaccca tactgcagga tattttatac tatatggaca gaatatttac 4741 ggttatattc ttcttggaaa tgttaatcaa gtggttggcg ctcggcttca aagtgtactt 4801 caccaacgcg tggtgttggc tcgatttcgt gattgtcatg gtatcgctta tcaacttcgt 4861 tgcttcactt gttggagctg gtggtattca agccttcaag actatgcgaa cgttaagagc 4921 actgagacca ctacgtgcca tgtcccgtat gcagggcatg agggtcgtcg ttaatgcgct 4981 ggtacaagct ataccgtcca tcttcaatgt gctattggtg tgtctaatat tttggctaat 5041 ttttgccata atgggtgtac agctttttgc tggaaaatat tttaagtgcg aggacatgaa 5101 cggcacgaag ctcagccacg agatcatacc aaatcgcaat gcctgcgaga gcgagaacta 5161 cacgtgggtg aattcagcaa tgaatttcga tcatgtaggt aacgcgtatc tgtgcctttt 5221 ccaagtggcc accttcaaag gctggataca aataatgaac gatgctatcg attcacgaga 5281 ggtggacaag caaccaattc gtgaaacgaa catctacatg tatttatatt tcgtattctt 5341 catcatattt ggatcatttt tcacactcaa tctgttcatt ggtgttatca ttgataattt 5401 taatgagcaa aagaaaaaag caggtggatc attagaaatg ttcatgacag aagatcagaa 5461 aaagtactat aatgctatga aaaagatggg ctctaaaaaa ccattaaaag ccattccaag 5521 accaaggtgg cgaccacaag caatagtctt tgaaatagta accgataaga aattcgatat 5581 aatcattatg ttattcattg gtctgaacat gttcaccatg accctcgatc gttacgatgc 5641 gtcggacacg tacaacgcgg tcctagacta tctcaatgcg atattcgtag ttattttcag 5701 ttccgaatgt ctattaaaaa tattcgcttt acgatatcac tattttattg agccatggaa 5761 tttatttgat gtagtagttg tcattttatc catcttaggt ctcgtactta gcgatattat 5821 cgagaagtac ttcgtgtcgc cgaccctgct ccgagtggtg cgtgtggcga aagtgggtcg 5881 agtcctgcga ctggtgaagg gcgccaaggg catcaggaca ctgctattcg cgttggccat 5941 gtcgctgccg gccctcttca acatctgcct gctgctgttc ctggtcatgt tcatcttcgc 6001 catcttcggc atgtcgttct tcatgcacgt gaaggagaag agcggcatca acgacgtcta 6061 caacttcaag acctttggtc agagcatgat cctgctcttt cagatgtcga cgtcagccgg 6121 ttgggatggt gtactggacg ccattatcaa tgaggaagca tgcgatccac ccgacaacga 6181 caaaggctat ccgggcaatt gtggttcagc gaccgttgga ataacgtttc tcctctcata 6241 cctagttata agctttttga tagttattaa tatgtacatt gctgtcattc tcgagaacta 6301 tagtcaggcc accgaggacg tgcaagaggg tctaaccgac gacgactacg acatgtacta 6361 cgagatctgg cagcaattcg atccggaggg cacccagtat atacgctacg accagctgtc 6421 cgaattcctg gacgtgctgg agcccccgct gcagatccat aagccgaaca agtacaagat 6481 catatcgatg gacataccca tctgtcgcgg cgacctcatg tactgtgtcg acatcctcga 6541 cgccctcacg aaagacttct ttgcgcgcaa gggcaatccg attgaggaga cgggcgagat 6601 cggtgagata gccgcccgtc cggacacgga gggctatgag cccgtctcat cgacgctgtg 6661 gcgccagcgg gaggagtact gtgcccgtct catccagcac gcctggcgga agcacaaggc 6721 gcgcggcgag ggcggtggtg gtggtggtgg gtccttcgag ccggatccgg atcaggtcga 6781 tggcgatggt ggtggcgatc cggatgccgg ggagcctgca aacgacgaac cggcggatgg 6841 gatggctgag gcccccgcag gaggaggagg aggaggagga ggaggagatg gtagtgttaa 6901 tggtggagga actggaactg gaactggaga cggagctgcc gatgctgccg acgagagcaa 6961 tgtaaatagt ccgggtgagg atgcagcgtc ggcggcagca ggagcggcga caggagcgac 7021 ggcgggaagt cccggggcgg gcagcgccgg acgacagacc gccgttctcg tggagagcga 7081 cgggttcgtg acgaagaacg gccacaaggt ggtcatccac tcgcgatcgc cgagcatcac 7141 gtcgcgcacg gcggatgtct gagccaggcc tcgccccccc ctccaagatg cacgcgagta 7201 ttagcatgag tacgtgttgg atgttgcatg ttgcgtgttg cgcgttgggt gcttaaccaa 7261 tccagtgcgt catgtgcaac taaacagtga gctaacaaca acagcgaaca aggcgaacaa 7321 caagcataat tttctgctat atataatgaa agtacaccat acaacaaaac aatcgaaaca 7381 aaccaacaac agtaacaaca tcatcaagag aacaaccaca acaacaacag taacaacaat 7441 cgatgaaata acgaagaaga acaacaacaa caccagtgta atgtctttga gttacaaaac 7501 atacatacat acatatacat actatatatt tgtatacccg cattattcag ttaacgagtc 7561 agcaaccaac aacaatcata cttaagctaa acaaccgaaa tgtcgaaata ttttgtaagc 7621 agctcgtagt ccaatccatt taggcgtttt ttccaaacca aacaatttgc ctaagcaggt 7681 ggaagaagaa gtaaaacatc aacacaccca cactagagct tgaaaatgat cgataaatac 7741 cgattcgata atatcgatgt tttcaaggca aaacacatat ttaatatcga gaaagtgcaa 7801 actgtcgata ttttccaagc tctaacatac acacaaaacc cacacacaac acactcacac 7861 ataaccataa acaaatataa tcccaaaaaa caaaaaacca aaaccgataa caaagttaaa 7921 gaacgatgaa caagctctaa aaattgtatt tgccagtagt gggacaacaa acaacacgct 7981 tgatttaatt aactaccaaa c