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LOCUS XM_017144156 8004 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X15, mRNA. ACCESSION XM_017144156 VERSION XM_017144156.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144156.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8004 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8004 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 15 Proteins" /db_xref="GeneID:108059094" CDS 785..7165 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X15" /protein_id="XP_016999645.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL EDIDPFYSNVLTFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFII TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDE GISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNI RRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENG AIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRN QSVGATNGGTTCLDTNHKLEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKD VMVLNDIIEQAAGRHSRASDRGVSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVW DCCWVWLKLQEWISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYF FTATFAIEATMKLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLL RVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDR FPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLV VLNLFLALLLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNK LTNQISDQPSEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKN NKPKKSKYLNNATDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKEDLGL DEELDEEGECEEGPLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSPFWQ GWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDRIFT VIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVASLVGAGGIQAFKTMRTL RALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKYFKC EDMNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQIMND AIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGGSLE MFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIGLNM FTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVVVVI LSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLPALF NICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGWDGV LDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILENYSQ ATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNKYKI ISMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPVSST LWRQREEYCARLIQHAWRKHKARGEGGGGGGGSFEPDPDQVDGDGGGDPDAGEPANDE PADGMAEAPAGGGGGGGGGDGSVNGGGTGTGTGDGAADAADESNVNSPGEDAASAAAG AATGATAGSPGAGSAGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV" misc_feature 1238..2092 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2447..3004 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3233..3868 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3944..4603 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 4613..5428 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5396..5554 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5441..5452 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5576..6328 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6359..6502 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acacgcgctg cggcagctga cagtttcagt aaaccacgga gacgaacgga ttacggctct 61 gggaacaaaa cgcaacgttt gatgaaaatt tttggcaact cgtcgcgtcg tcttggttgt 121 tgttaaccac atcctgctaa cgccaaagtc cgaaaataaa attcaaccca aatacccaaa 181 aataacacag atcaaacaaa caaagcaaaa aaaaagcaaa caaaataaca aaaaaaaacc 241 aaaaaaaaaa acaaacaaaa aattcatctt ctacttgttc taccgcttca actttattcg 301 tcttcgtctc cgtaataaat atataaaaag tatatacata tatatatata tatatatgca 361 tatgtgtgtg agtgcgtcgc gtgtgtgttg gtgcctgtaa atgtgtgagc cacaacaaca 421 acaacagcag cagcagccag agccagagca acaaccacag cagcagcaac aacaacaaca 481 acaacagtag ttaacagcag caacaattct tagcagcaat aacaatacaa gcaagcacca 541 ccacaacaac aagagcagca acaacaccaa aaacagccac aatagcaatc acaataacaa 601 catcaaagga tagagcgagc agccaagcac aacatcgatt gacatcgatt aacgcatcgt 661 gctaagcggc gggcgctaat cgaacatggc gcctcggata tagttgtagc tttaatgtag 721 caggcgacat ccatgtgcct catgccttgg aaatctaagg ctctcatcgt tggccgcata 781 gacaatgaca gaagattccg actcgatatc tgaggaagaa cgcagtttgt tccgtccctt 841 tacccgcgaa tcattggtgc aaatcgaaca acgcattgcc gctgaacatg aaaagcagaa 901 ggagctggaa agaaagagag ccgagggaga ggtgccgcaa tatggtcgca agaaaaaaca 961 aaaagaaatc cgatatgatg acgaggacga ggatgaaggt ccacaaccgg atcctacact 1021 tgaacagggt gtgccaatac ctgttcgatt gcagggcagc ttcccgccgg aattggcctc 1081 cactcctctc gaggatatcg atcccttcta cagcaatgta ctgacattcg tagttgtaag 1141 caaaggaaaa gatatttttc gcttttctgc atcaaaagca atgtggatgc tcgatccatt 1201 caatccgata cgtcgtgtgg ccatttacat tctagtgcat ccattatttt ccctattcat 1261 catcaccaca attctcgtca actgcatcct gatgataatg ccgacaacgc ccacggttga 1321 gtccactgag gtgatattca ccggaatcta cacatttgaa tcagctgtta aagtgatggc 1381 acgaggtttc attttatgcc cgtttacgta tcttagagat gcatggaatt ggctggactt 1441 cgtagtaata gctttagctt atgtgaccat gggtatagat ttaggtaatc tagcagcctt 1501 gcgaacgttt agggtgctgc gagcgcttaa aaccgtagcc attgtgccag gcttgaagac 1561 catcgtcggc gccgtcatcg aatcggtgaa gaatctgcgc gatgtgataa tcctcaccat 1621 gttctccctg tcggtcttcg cgctgatggg cctgcagatc tacatgggcg tgctcacgca 1681 gaagtgcatc aagaagttcc cgctggacgg ctcctggggc aatctgaccg acgagaactg 1741 ggactatcac aatcgcaaca gctccaattg gtactcggag gacgagggca tctcatttcc 1801 gctgtgcggc aatatatccg gcgcggggca atgcgacgat gactacgtgt gtctgcaggg 1861 gtttgggccg aatccgaact acggctacac cagcttcgat tcattcggct gggccttcct 1921 gtccgccttc cggctgatga cacaggactt ctgggaggac ctctaccagc tggtgttgcg 1981 cgccgccgga ccatggcaca tgctgttctt tatagtcatc atcttcctag gttcattcta 2041 tcttgtgaat ttgattttgg ccattgttgc catgtcgtat gacgaattgc aaaagaaggc 2101 cgaagaagaa gaggctgccg aagaggaggc gatacgtgaa gcggaggagg ctgccgccgc 2161 caaagctgcc aagctggagg agcgggccaa tgcgcaggct caggcagcag cggatgcggc 2221 tgccgccgaa gaggctgcac tgcatccgga gatggccaag agtccgacgt attcgtgcat 2281 cagctatgag cttttcgttg gcggcgagaa gggcaacgat gacaacaaca aggagaagat 2341 gtccattcgc agcgtcgagg tggagtcgga gtcggtgagc gttatacaaa gacaaccagc 2401 acctaccaca gcacaccaag ctaccaaagt tcgtaaagtg agcacgacat ccttatcctt 2461 acctggttca ccgtttaaca tacgcagggg atcacgtagt tctcacaagt acacgatacg 2521 gaacggacgt ggccgctttg gtatacccgg tagcgatcgc aagccgttgg tattgtcaac 2581 atatcaggat gcccagcagc acttgcccta tgccgacgac tcgaatgccg tcaccccgat 2641 gtccgaggag aacggggcca tcatagtgcc cgtgtactat ggcaacctag gctctcggca 2701 ctcatcgtat acctcgcatc agtcccgaat atcgtatacc tcacatggcg atctactcgg 2761 cggcatggcc gtcatgggcg tcagcacaat gaccaaggag agcaaattgc gcaaccgcaa 2821 cacacgcaat caatcagtgg gcgccaccaa tggcggcacc acctgcctgg acaccaatca 2881 caagctcgag catcgcgact acgaaatcgg tctggagtgc acggacgaag ctggcaagat 2941 taaacatcat gacaatcctt ttatcgagcc cgtccagaca caaacggtgg tcgacatgaa 3001 agatgtgatg gtcctgaatg acatcatcga acaggccgct ggtcggcaca gtcgggcaag 3061 cgatcgcggt gtctccgttt actattttcc aacagaggac gatgacgagg acgggccgac 3121 gttcaaagac aaggcactcg aagtgatcct aaagggcatc gatgtgtttt gtgtgtggga 3181 ctgttgctgg gtttggttga aattgcagga gtggatctcg ctgatcgtct tcgatccctt 3241 cgtcgagctc ttcatcacgc tgtgcattgt ggtcaacacg atgttcatgg cgatggatca 3301 ccacgatatg aacaaggaga tggagcgcgt gctcaagagt ggcaactatt tcttcacggc 3361 cacctttgcc atcgaggcca ccatgaagct gtgcgccatg agccccaagt actatttcca 3421 ggagggctgg aacatcttcg acttcatcat cgtggccctg tcgcttttgg agctgggtct 3481 cgagggcgtc cagggcctgt ccgtcttgcg ttcgtttcga ttgctgcgtg tatttaaatt 3541 ggccaaatct tggccaacac ttaatttact catttcgatt atgggacgca ccatgggcgc 3601 tttgggtaat ctgacatttg tactttgcat tatcatcttc atctttgcgg tgatgggaat 3661 gcaactgttc ggaaagaatt atcatgatca caaggaccgt ttcccggatg gcgacctgcc 3721 gcgctggaac ttcaccgact ttatgcacag cttcatgatc gtgttccggg tgctctgcgg 3781 cgaatggatc gagtccatgt gggactgtat gtacgtgggc gatgtctcgt gcattccctt 3841 cttcttggcc accgttgtca tcggcaatct tgtggtactt aaccttttct tagccttgct 3901 tttgtccaat tttggctcat ctagcttatc agcgccgact gccgataacg atacgaataa 3961 aatagccgag gccttcaatc gaattggccg atttaaaagt tgggttaagc gtaatattgc 4021 tgattgtttc aagttaatac gtaacaaatt gacaaatcaa ataagtgatc aaccatcaga 4081 gcatggtgac aacgaactgg agctggggca cgacgagatc ctcgccgatg gcctgatcaa 4141 gaagggaatc aaggagcaga cgcaactgga ggtggccatc ggggatggca tggagttcac 4201 gatacacggc gacatgaaga acaacaagcc gaagaaatcc aaatatctaa ataacgcaac 4261 ggacgacgac actgccagca ttaactcata tggtagccat aagaatcgac cattcaagga 4321 cgagagccac aagggcagcg ccgagacgat ggagggcgag gagaagcgcg acgccagcaa 4381 ggaggattta ggtctcgacg aggaactgga cgaggagggc gaatgcgagg agggcccgct 4441 cgacggtgat atcattattc atgcacacga cgaggatata ctcgatgaat atccagctga 4501 ttgctgcccc gattcgtact ataagaaatt tccgatctta gccggtgacg atgactcgcc 4561 gttctggcaa ggatggggca atttacgact gaaaactttt caattaattg aaaataaata 4621 ttttgaaaca gctgttatca ctatgatttt aatgagtagc ttagctttgg cattagaaga 4681 tgtacatctg ccacaaagac ccatactgca ggatatttta tactatatgg acagaatatt 4741 tacggttata ttcttcttgg aaatgttaat caagtggttg gcgctcggct tcaaagtgta 4801 cttcaccaac gcgtggtgtt ggctcgattt cgtgattgtc atggtatcgc ttatcaactt 4861 cgttgcttca cttgttggag ctggtggtat tcaagccttc aagactatgc gaacgttaag 4921 agcactgaga ccactacgtg ccatgtcccg tatgcagggc atgagggtcg tcgttaatgc 4981 gctggtacaa gctataccgt ccatcttcaa tgtgctattg gtgtgtctaa tattttggct 5041 aatttttgcc ataatgggtg tacagctttt tgctggaaaa tattttaagt gcgaggacat 5101 gaacggcacg aagctcagcc acgagatcat accaaatcgc aatgcctgcg agagcgagaa 5161 ctacacgtgg gtgaattcag caatgaattt cgatcatgta ggtaacgcgt atctgtgcct 5221 tttccaagtg gccaccttca aaggctggat acaaataatg aacgatgcta tcgattcacg 5281 agaggtggac aagcaaccaa ttcgtgaaac gaacatctac atgtatttat atttcgtatt 5341 cttcatcata tttggatcat ttttcacact caatctgttc attggtgtta tcattgataa 5401 ttttaatgag caaaagaaaa aagcaggtgg atcattagaa atgttcatga cagaagatca 5461 gaaaaagtac tataatgcta tgaaaaagat gggctctaaa aaaccattaa aagccattcc 5521 aagaccaagg tggcgaccac aagcaatagt ctttgaaata gtaaccgata agaaattcga 5581 tataatcatt atgttattca ttggtctgaa catgttcacc atgaccctcg atcgttacga 5641 tgcgtcggac acgtacaacg cggtcctaga ctatctcaat gcgatattcg tagttatttt 5701 cagttccgaa tgtctattaa aaatattcgc tttacgatat cactatttta ttgagccatg 5761 gaatttattt gatgtagtag ttgtcatttt atccatctta ggtctcgtac ttagcgatat 5821 tatcgagaag tacttcgtgt cgccgaccct gctccgagtg gtgcgtgtgg cgaaagtggg 5881 tcgagtcctg cgactggtga agggcgccaa gggcatcagg acactgctat tcgcgttggc 5941 catgtcgctg ccggccctct tcaacatctg cctgctgctg ttcctggtca tgttcatctt 6001 cgccatcttc ggcatgtcgt tcttcatgca cgtgaaggag aagagcggca tcaacgacgt 6061 ctacaacttc aagacctttg gtcagagcat gatcctgctc tttcagatgt cgacgtcagc 6121 cggttgggat ggtgtactgg acgccattat caatgaggaa gcatgcgatc cacccgacaa 6181 cgacaaaggc tatccgggca attgtggttc agcgaccgtt ggaataacgt ttctcctctc 6241 atacctagtt ataagctttt tgatagttat taatatgtac attgctgtca ttctcgagaa 6301 ctatagtcag gccaccgagg acgtgcaaga gggtctaacc gacgacgact acgacatgta 6361 ctacgagatc tggcagcaat tcgatccgga gggcacccag tatatacgct acgaccagct 6421 gtccgaattc ctggacgtgc tggagccccc gctgcagatc cataagccga acaagtacaa 6481 gatcatatcg atggacatac ccatctgtcg cggcgacctc atgtactgtg tcgacatcct 6541 cgacgccctc acgaaagact tctttgcgcg caagggcaat ccgattgagg agacgggcga 6601 gatcggtgag atagccgccc gtccggacac ggagggctat gagcccgtct catcgacgct 6661 gtggcgccag cgggaggagt actgtgcccg tctcatccag cacgcctggc ggaagcacaa 6721 ggcgcgcggc gagggcggtg gtggtggtgg tgggtccttc gagccggatc cggatcaggt 6781 cgatggcgat ggtggtggcg atccggatgc cggggagcct gcaaacgacg aaccggcgga 6841 tgggatggct gaggcccccg caggaggagg aggaggagga ggaggaggag atggtagtgt 6901 taatggtgga ggaactggaa ctggaactgg agacggagct gccgatgctg ccgacgagag 6961 caatgtaaat agtccgggtg aggatgcagc gtcggcggca gcaggagcgg cgacaggagc 7021 gacggcggga agtcccgggg cgggcagcgc cggacgacag accgccgttc tcgtggagag 7081 cgacgggttc gtgacgaaga acggccacaa ggtggtcatc cactcgcgat cgccgagcat 7141 cacgtcgcgc acggcggatg tctgagccag gcctcgcccc cccctccaag atgcacgcga 7201 gtattagcat gagtacgtgt tggatgttgc atgttgcgtg ttgcgcgttg ggtgcttaac 7261 caatccagtg cgtcatgtgc aactaaacag tgagctaaca acaacagcga acaaggcgaa 7321 caacaagcat aattttctgc tatatataat gaaagtacac catacaacaa aacaatcgaa 7381 acaaaccaac aacagtaaca acatcatcaa gagaacaacc acaacaacaa cagtaacaac 7441 aatcgatgaa ataacgaaga agaacaacaa caacaccagt gtaatgtctt tgagttacaa 7501 aacatacata catacatata catactatat atttgtatac ccgcattatt cagttaacga 7561 gtcagcaacc aacaacaatc atacttaagc taaacaaccg aaatgtcgaa atattttgta 7621 agcagctcgt agtccaatcc atttaggcgt tttttccaaa ccaaacaatt tgcctaagca 7681 ggtggaagaa gaagtaaaac atcaacacac ccacactaga gcttgaaaat gatcgataaa 7741 taccgattcg ataatatcga tgttttcaag gcaaaacaca tatttaatat cgagaaagtg 7801 caaactgtcg atattttcca agctctaaca tacacacaaa acccacacac aacacactca 7861 cacataacca taaacaaata taatcccaaa aaacaaaaaa ccaaaaccga taacaaagtt 7921 aaagaacgat gaacaagctc taaaaattgt atttgccagt agtgggacaa caaacaacac 7981 gcttgattta attaactacc aaac