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LOCUS XM_017144153 8013 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X13, mRNA. ACCESSION XM_017144153 VERSION XM_017144153.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144153.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8013 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8013 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 11 Proteins" /db_xref="GeneID:108059094" CDS 785..7174 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X13" /protein_id="XP_016999642.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNVL TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMI MPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTM GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL MGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNIS GAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGP WHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKA AKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKM SIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTYTIRNGRGRFGIPGSDRKPLVLS TYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNLGSRHSSYTSHQSRISYTSHGD LLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTTCLDTNHKLEHRDYEIGLECTD EAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQAAGRHSRASDRGVSVYYFPTED DDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKLQEWISLIVFDPFVELFITLCIVV NTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLCAMSPKYYFQEGWNIFDFI IVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIMGRTMGALGNLTFV LCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNFTDFMHSFMIVFRVLCGEWIES MWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLSAPTADNDTNKIAE AFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSGKGVCRCISAEHGDNELELGHD EILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKYLNNATMIGNSINHQ DNRLEHELNHRGLSLQDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDASKED LGLDEELDEEGECEEGPLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDDDSP FWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYYMDR IFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAFRSM RTLRALRPLRAVSRWEGMKVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFAGKY FKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGWIQI MNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKKAGG SLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIMLFIG LNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLFDVV VVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAMSLP ALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTSAGW DGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVILEN YSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHKPNK YKIISMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGYEPV SSTLWRQREEYCARLIQHAWRKHKARGEGGGGGGGSFEPDPDQVDGDGGGDPDAGEPA NDEPADGMAEAPAGGGGGGGGGDGSVNGGGTGTGTGDGAADAADESNVNSPGEDAASA AAGAATGATAGSPGAGSAGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV" misc_feature 1205..2059 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2408..2908 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3137..3772 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3848..4612 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 4622..5437 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5405..5563 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5450..5461 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5585..6337 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6368..6511 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acacgcgctg cggcagctga cagtttcagt aaaccacgga gacgaacgga ttacggctct 61 gggaacaaaa cgcaacgttt gatgaaaatt tttggcaact cgtcgcgtcg tcttggttgt 121 tgttaaccac atcctgctaa cgccaaagtc cgaaaataaa attcaaccca aatacccaaa 181 aataacacag atcaaacaaa caaagcaaaa aaaaagcaaa caaaataaca aaaaaaaacc 241 aaaaaaaaaa acaaacaaaa aattcatctt ctacttgttc taccgcttca actttattcg 301 tcttcgtctc cgtaataaat atataaaaag tatatacata tatatatata tatatatgca 361 tatgtgtgtg agtgcgtcgc gtgtgtgttg gtgcctgtaa atgtgtgagc cacaacaaca 421 acaacagcag cagcagccag agccagagca acaaccacag cagcagcaac aacaacaaca 481 acaacagtag ttaacagcag caacaattct tagcagcaat aacaatacaa gcaagcacca 541 ccacaacaac aagagcagca acaacaccaa aaacagccac aatagcaatc acaataacaa 601 catcaaagga tagagcgagc agccaagcac aacatcgatt gacatcgatt aacgcatcgt 661 gctaagcggc gggcgctaat cgaacatggc gcctcggata tagttgtagc tttaatgtag 721 caggcgacat ccatgtgcct catgccttgg aaatctaagg ctctcatcgt tggccgcata 781 gacaatgaca gaagattccg actcgatatc tgaggaagaa cgcagtttgt tccgtccctt 841 tacccgcgaa tcattggtgc aaatcgaaca acgcattgcc gctgaacatg aaaagcagaa 901 ggagctggaa agaaagagag ccgagggaga ggtgatccga tatgatgacg aggacgagga 961 tgaaggtcca caaccggatc ctacacttga acagggtgtg ccaatacctg ttcgattgca 1021 gggcagcttc ccgccggaat tggcctccac tcctctcgag gatatcgatc ccttctacag 1081 caatgtactg acattcgtag ttgtaagcaa aggaaaagat atttttcgct tttctgcatc 1141 aaaagcaatg tggatgctcg atccattcaa tccgatacgt cgtgtggcca tttacattct 1201 agtgcatcca ttattttccc tattcatcat caccacaatt ctcgtcaact gcatcctgat 1261 gataatgccg acaacgccca cggttgagtc cactgaggtg atattcaccg gaatctacac 1321 atttgaatca gctgttaaag tgatggcacg aggtttcatt ttatgcccgt ttacgtatct 1381 tagagatgca tggaattggc tggacttcgt agtaatagct ttagcttatg tgaccatggg 1441 tatagattta ggtaatctag cagccttgcg aacgtttagg gtgctgcgag cgcttaaaac 1501 cgtagccatt gtgccaggct tgaagaccat cgtcggcgcc gtcatcgaat cggtgaagaa 1561 tctgcgcgat gtgataatcc tcaccatgtt ctccctgtcg gtcttcgcgc tgatgggcct 1621 gcagatctac atgggcgtgc tcacgcagaa gtgcatcaag aagttcccgc tggacggctc 1681 ctggggcaat ctgaccgacg agaactggga ctatcacaat cgcaacagct ccaattggta 1741 ctcggaggac gagggcatct catttccgct gtgcggcaat atatccggcg cggggcaatg 1801 cgacgatgac tacgtgtgtc tgcaggggtt tgggccgaat ccgaactacg gctacaccag 1861 cttcgattca ttcggctggg ccttcctgtc cgccttccgg ctgatgacac aggacttctg 1921 ggaggacctc taccagctgg tgttgcgcgc cgccggacca tggcacatgc tgttctttat 1981 agtcatcatc ttcctaggtt cattctatct tgtgaatttg attttggcca ttgttgccat 2041 gtcgtatgac gaattgcaaa agaaggccga agaagaagag gctgccgaag aggaggcgat 2101 acgtgaagcg gaggaggctg ccgccgccaa agctgccaag ctggaggagc gggccaatgc 2161 gcaggctcag gcagcagcgg atgcggctgc cgccgaagag gctgcactgc atccggagat 2221 ggccaagagt ccgacgtatt cgtgcatcag ctatgagctt ttcgttggcg gcgagaaggg 2281 caacgatgac aacaacaagg agaagatgtc cattcgcagc gtcgaggtgg agtcggagtc 2341 ggtgagcgtt atacaaagac aaccagcacc taccacagca caccaagcta ccaaagttcg 2401 taaagtgagc acgtacacga tacggaacgg acgtggccgc tttggtatac ccggtagcga 2461 tcgcaagccg ttggtattgt caacatatca ggatgcccag cagcacttgc cctatgccga 2521 cgactcgaat gccgtcaccc cgatgtccga ggagaacggg gccatcatag tgcccgtgta 2581 ctatggcaac ctaggctctc ggcactcatc gtatacctcg catcagtccc gaatatcgta 2641 tacctcacat ggcgatctac tcggcggcat ggccgtcatg ggcgtcagca caatgaccaa 2701 ggagagcaaa ttgcgcaacc gcaacacacg caatcaatca gtgggcgcca ccaatggcgg 2761 caccacctgc ctggacacca atcacaagct cgagcatcgc gactacgaaa tcggtctgga 2821 gtgcacggac gaagctggca agattaaaca tcatgacaat ccttttatcg agcccgtcca 2881 gacacaaacg gtggtcgaca tgaaagatgt gatggtcctg aatgacatca tcgaacaggc 2941 cgctggtcgg cacagtcggg caagcgatcg cggtgtctcc gtttactatt ttccaacaga 3001 ggacgatgac gaggacgggc cgacgttcaa agacaaggca ctcgaagtga tcctaaaggg 3061 catcgatgtg ttttgtgtgt gggactgttg ctgggtttgg ttgaaattgc aggagtggat 3121 ctcgctgatc gtcttcgatc ccttcgtcga gctcttcatc acgctgtgca ttgtggtcaa 3181 cacgatgttc atggcgatgg atcaccacga tatgaacaag gagatggagc gcgtgctcaa 3241 gagtggcaac tatttcttca cggccacctt tgccatcgag gccaccatga agctgtgcgc 3301 catgagcccc aagtactatt tccaggaggg ctggaacatc ttcgacttca tcatcgtggc 3361 cctgtcgctt ttggagctgg gtctcgaggg cgtccagggc ctgtccgtct tgcgttcgtt 3421 tcgattgctg cgtgtattta aattggccaa atcttggcca acacttaatt tactcatttc 3481 gattatggga cgcaccatgg gcgctttggg taatctgaca tttgtacttt gcattatcat 3541 cttcatcttt gcggtgatgg gaatgcaact gttcggaaag aattatcatg atcacaagga 3601 ccgtttcccg gatggcgacc tgccgcgctg gaacttcacc gactttatgc acagcttcat 3661 gatcgtgttc cgggtgctct gcggcgaatg gatcgagtcc atgtgggact gtatgtacgt 3721 gggcgatgtc tcgtgcattc ccttcttctt ggccaccgtt gtcatcggca atcttgtggt 3781 acttaacctt ttcttagcct tgcttttgtc caattttggc tcatctagct tatcagcgcc 3841 gactgccgat aacgatacga ataaaatagc cgaggccttc aatcgaattg gccgatttaa 3901 aagttgggtt aagcgtaata ttgctgattg tttcaagtta atacgtaaca aattgacaaa 3961 tcaaataagt gatcaaccat caggcaaagg cgtttgtcgt tgtatatctg cagagcatgg 4021 tgacaacgaa ctggagctgg ggcacgacga gatcctcgcc gatggcctga tcaagaaggg 4081 aatcaaggag cagacgcaac tggaggtggc catcggggat ggcatggagt tcacgataca 4141 cggcgacatg aagaacaaca agccgaagaa atccaaatat ctaaataacg caacgatgat 4201 tggcaactca attaaccacc aagacaatag actggaacac gagctaaacc atagaggttt 4261 gtccttacag gacgacgaca ctgccagcat taactcatat ggtagccata agaatcgacc 4321 attcaaggac gagagccaca agggcagcgc cgagacgatg gagggcgagg agaagcgcga 4381 cgccagcaag gaggatttag gtctcgacga ggaactggac gaggagggcg aatgcgagga 4441 gggcccgctc gacggtgata tcattattca tgcacacgac gaggatatac tcgatgaata 4501 tccagctgat tgctgccccg attcgtacta taagaaattt ccgatcttag ccggtgacga 4561 tgactcgccg ttctggcaag gatggggcaa tttacgactg aaaacttttc aattaattga 4621 aaataaatat tttgaaacag ctgttatcac tatgatttta atgagtagct tagctttggc 4681 attagaagat gtacatctgc cacaaagacc catactgcag gatattttat actatatgga 4741 cagaatattt acggttatat tcttcttgga aatgttaatc aagtggttgg cgctcggctt 4801 caaagtgtac ttcaccaacg cgtggtgttg gctcgatttc gtgattgtca tgctgtcgct 4861 aattaatttg gccgcggtct ggtccggggc cgacgatgtg cccgcctttc gctcgatgcg 4921 aactctgcgc gccctgcgac ctctgcgggc agtttcgcgc tgggagggca tgaaagtcgt 4981 cgttaatgcg ctggtacaag ctataccgtc catcttcaat gtgctattgg tgtgtctaat 5041 attttggcta atttttgcca taatgggtgt acagcttttt gctggaaaat attttaagtg 5101 cgaggacatg aacggcacga agctcagcca cgagatcata ccaaatcgca atgcctgcga 5161 gagcgagaac tacacgtggg tgaattcagc aatgaatttc gatcatgtag gtaacgcgta 5221 tctgtgcctt ttccaagtgg ccaccttcaa aggctggata caaataatga acgatgctat 5281 cgattcacga gaggtggaca agcaaccaat tcgtgaaacg aacatctaca tgtatttata 5341 tttcgtattc ttcatcatat ttggatcatt tttcacactc aatctgttca ttggtgttat 5401 cattgataat tttaatgagc aaaagaaaaa agcaggtgga tcattagaaa tgttcatgac 5461 agaagatcag aaaaagtact ataatgctat gaaaaagatg ggctctaaaa aaccattaaa 5521 agccattcca agaccaaggt ggcgaccaca agcaatagtc tttgaaatag taaccgataa 5581 gaaattcgat ataatcatta tgttattcat tggtctgaac atgttcacca tgaccctcga 5641 tcgttacgat gcgtcggaca cgtacaacgc ggtcctagac tatctcaatg cgatattcgt 5701 agttattttc agttccgaat gtctattaaa aatattcgct ttacgatatc actattttat 5761 tgagccatgg aatttatttg atgtagtagt tgtcatttta tccatcttag gtctcgtact 5821 tagcgatatt atcgagaagt acttcgtgtc gccgaccctg ctccgagtgg tgcgtgtggc 5881 gaaagtgggt cgagtcctgc gactggtgaa gggcgccaag ggcatcagga cactgctatt 5941 cgcgttggcc atgtcgctgc cggccctctt caacatctgc ctgctgctgt tcctggtcat 6001 gttcatcttc gccatcttcg gcatgtcgtt cttcatgcac gtgaaggaga agagcggcat 6061 caacgacgtc tacaacttca agacctttgg tcagagcatg atcctgctct ttcagatgtc 6121 gacgtcagcc ggttgggatg gtgtactgga cgccattatc aatgaggaag catgcgatcc 6181 acccgacaac gacaaaggct atccgggcaa ttgtggttca gcgaccgttg gaataacgtt 6241 tctcctctca tacctagtta taagcttttt gatagttatt aatatgtaca ttgctgtcat 6301 tctcgagaac tatagtcagg ccaccgagga cgtgcaagag ggtctaaccg acgacgacta 6361 cgacatgtac tacgagatct ggcagcaatt cgatccggag ggcacccagt atatacgcta 6421 cgaccagctg tccgaattcc tggacgtgct ggagcccccg ctgcagatcc ataagccgaa 6481 caagtacaag atcatatcga tggacatacc catctgtcgc ggcgacctca tgtactgtgt 6541 cgacatcctc gacgccctca cgaaagactt ctttgcgcgc aagggcaatc cgattgagga 6601 gacgggcgag atcggtgaga tagccgcccg tccggacacg gagggctatg agcccgtctc 6661 atcgacgctg tggcgccagc gggaggagta ctgtgcccgt ctcatccagc acgcctggcg 6721 gaagcacaag gcgcgcggcg agggcggtgg tggtggtggt gggtccttcg agccggatcc 6781 ggatcaggtc gatggcgatg gtggtggcga tccggatgcc ggggagcctg caaacgacga 6841 accggcggat gggatggctg aggcccccgc aggaggagga ggaggaggag gaggaggaga 6901 tggtagtgtt aatggtggag gaactggaac tggaactgga gacggagctg ccgatgctgc 6961 cgacgagagc aatgtaaata gtccgggtga ggatgcagcg tcggcggcag caggagcggc 7021 gacaggagcg acggcgggaa gtcccggggc gggcagcgcc ggacgacaga ccgccgttct 7081 cgtggagagc gacgggttcg tgacgaagaa cggccacaag gtggtcatcc actcgcgatc 7141 gccgagcatc acgtcgcgca cggcggatgt ctgagccagg cctcgccccc ccctccaaga 7201 tgcacgcgag tattagcatg agtacgtgtt ggatgttgca tgttgcgtgt tgcgcgttgg 7261 gtgcttaacc aatccagtgc gtcatgtgca actaaacagt gagctaacaa caacagcgaa 7321 caaggcgaac aacaagcata attttctgct atatataatg aaagtacacc atacaacaaa 7381 acaatcgaaa caaaccaaca acagtaacaa catcatcaag agaacaacca caacaacaac 7441 agtaacaaca atcgatgaaa taacgaagaa gaacaacaac aacaccagtg taatgtcttt 7501 gagttacaaa acatacatac atacatatac atactatata tttgtatacc cgcattattc 7561 agttaacgag tcagcaacca acaacaatca tacttaagct aaacaaccga aatgtcgaaa 7621 tattttgtaa gcagctcgta gtccaatcca tttaggcgtt ttttccaaac caaacaattt 7681 gcctaagcag gtggaagaag aagtaaaaca tcaacacacc cacactagag cttgaaaatg 7741 atcgataaat accgattcga taatatcgat gttttcaagg caaaacacat atttaatatc 7801 gagaaagtgc aaactgtcga tattttccaa gctctaacat acacacaaaa cccacacaca 7861 acacactcac acataaccat aaacaaatat aatcccaaaa aacaaaaaac caaaaccgat 7921 aacaaagtta aagaacgatg aacaagctct aaaaattgta tttgccagta gtgggacaac 7981 aaacaacacg cttgatttaa ttaactacca aac