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LOCUS XM_017144151 8022 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X11, mRNA. ACCESSION XM_017144151 VERSION XM_017144151.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144151.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8022 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8022 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins" /db_xref="GeneID:108059094" CDS 785..7183 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X11" /protein_id="XP_016999640.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNVL TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMI MPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTM GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL MGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNIS GAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGP WHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKA AKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKM SIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYT IRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNL GSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTT CLDTNHKLEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQA AGRHSRASDRGEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKLQEWISLIVFD PFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATMKLCAMSPK YYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPTLNLLISIM GRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNFTDFMHSFM IVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLSNFGSSSLS APTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSEHGDNELEL GHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKYLNNATMIGNSI NHQDNRLEHELNHRGLSLQDDDTASINSYGSHKNRPFKDESHKGSAETMEGEEKRDAS KEDLGLDEELDEEGECEEGPLDGDIIIHAHDEDILDEYPADCCPDSYYKKFPILAGDD DSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLPQRPILQDILYY MDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMLSLINLAAVWSGADDVPAF RSMRTLRALRPLRAVSRWEGMKVVVNALVQAIPSIFNVLLVCLIFWLIFAIMGVQLFA GKYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYLCLFQVATFKGW IQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGVIIDNFNEQKKK AGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIVTDKKFDIIIML FIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALRYHYFIEPWNLF DVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAKGIRTLLFALAM SLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQSMILLFQMSTS AGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISFLIVINMYIAVI LENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFLDVLEPPLQIHK PNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIGEIAARPDTEGY EPVSSTLWRQREEYCARLIQHAWRKHKARGEGGGGGGGSFEPDPDQVDGDGGGDPDAG EPANDEPADGMAEAPAGGGGGGGGGDGSVNGGGTGTGTGDGAADAADESNVNSPGEDA ASAAAGAATGATAGSPGAGSAGRQTAVLVESDGFVTKNGHKVVIHSRSPSITSRTADV " misc_feature 1205..2059 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2414..2971 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3176..3811 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3887..4621 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 4631..5446 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5414..5572 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5459..5470 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5594..6346 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6377..6520 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acacgcgctg cggcagctga cagtttcagt aaaccacgga gacgaacgga ttacggctct 61 gggaacaaaa cgcaacgttt gatgaaaatt tttggcaact cgtcgcgtcg tcttggttgt 121 tgttaaccac atcctgctaa cgccaaagtc cgaaaataaa attcaaccca aatacccaaa 181 aataacacag atcaaacaaa caaagcaaaa aaaaagcaaa caaaataaca aaaaaaaacc 241 aaaaaaaaaa acaaacaaaa aattcatctt ctacttgttc taccgcttca actttattcg 301 tcttcgtctc cgtaataaat atataaaaag tatatacata tatatatata tatatatgca 361 tatgtgtgtg agtgcgtcgc gtgtgtgttg gtgcctgtaa atgtgtgagc cacaacaaca 421 acaacagcag cagcagccag agccagagca acaaccacag cagcagcaac aacaacaaca 481 acaacagtag ttaacagcag caacaattct tagcagcaat aacaatacaa gcaagcacca 541 ccacaacaac aagagcagca acaacaccaa aaacagccac aatagcaatc acaataacaa 601 catcaaagga tagagcgagc agccaagcac aacatcgatt gacatcgatt aacgcatcgt 661 gctaagcggc gggcgctaat cgaacatggc gcctcggata tagttgtagc tttaatgtag 721 caggcgacat ccatgtgcct catgccttgg aaatctaagg ctctcatcgt tggccgcata 781 gacaatgaca gaagattccg actcgatatc tgaggaagaa cgcagtttgt tccgtccctt 841 tacccgcgaa tcattggtgc aaatcgaaca acgcattgcc gctgaacatg aaaagcagaa 901 ggagctggaa agaaagagag ccgagggaga ggtgatccga tatgatgacg aggacgagga 961 tgaaggtcca caaccggatc ctacacttga acagggtgtg ccaatacctg ttcgattgca 1021 gggcagcttc ccgccggaat tggcctccac tcctctcgag gatatcgatc ccttctacag 1081 caatgtactg acattcgtag ttgtaagcaa aggaaaagat atttttcgct tttctgcatc 1141 aaaagcaatg tggatgctcg atccattcaa tccgatacgt cgtgtggcca tttacattct 1201 agtgcatcca ttattttccc tattcatcat caccacaatt ctcgtcaact gcatcctgat 1261 gataatgccg acaacgccca cggttgagtc cactgaggtg atattcaccg gaatctacac 1321 atttgaatca gctgttaaag tgatggcacg aggtttcatt ttatgcccgt ttacgtatct 1381 tagagatgca tggaattggc tggacttcgt agtaatagct ttagcttatg tgaccatggg 1441 tatagattta ggtaatctag cagccttgcg aacgtttagg gtgctgcgag cgcttaaaac 1501 cgtagccatt gtgccaggct tgaagaccat cgtcggcgcc gtcatcgaat cggtgaagaa 1561 tctgcgcgat gtgataatcc tcaccatgtt ctccctgtcg gtcttcgcgc tgatgggcct 1621 gcagatctac atgggcgtgc tcacgcagaa gtgcatcaag aagttcccgc tggacggctc 1681 ctggggcaat ctgaccgacg agaactggga ctatcacaat cgcaacagct ccaattggta 1741 ctcggaggac gagggcatct catttccgct gtgcggcaat atatccggcg cggggcaatg 1801 cgacgatgac tacgtgtgtc tgcaggggtt tgggccgaat ccgaactacg gctacaccag 1861 cttcgattca ttcggctggg ccttcctgtc cgccttccgg ctgatgacac aggacttctg 1921 ggaggacctc taccagctgg tgttgcgcgc cgccggacca tggcacatgc tgttctttat 1981 agtcatcatc ttcctaggtt cattctatct tgtgaatttg attttggcca ttgttgccat 2041 gtcgtatgac gaattgcaaa agaaggccga agaagaagag gctgccgaag aggaggcgat 2101 acgtgaagcg gaggaggctg ccgccgccaa agctgccaag ctggaggagc gggccaatgc 2161 gcaggctcag gcagcagcgg atgcggctgc cgccgaagag gctgcactgc atccggagat 2221 ggccaagagt ccgacgtatt cgtgcatcag ctatgagctt ttcgttggcg gcgagaaggg 2281 caacgatgac aacaacaagg agaagatgtc cattcgcagc gtcgaggtgg agtcggagtc 2341 ggtgagcgtt atacaaagac aaccagcacc taccacagca caccaagcta ccaaagttcg 2401 taaagtgagc acgacatcct tatccttacc tggttcaccg tttaacatac gcaggggatc 2461 acgtagttct cacaagtaca cgatacggaa cggacgtggc cgctttggta tacccggtag 2521 cgatcgcaag ccgttggtat tgtcaacata tcaggatgcc cagcagcact tgccctatgc 2581 cgacgactcg aatgccgtca ccccgatgtc cgaggagaac ggggccatca tagtgcccgt 2641 gtactatggc aacctaggct ctcggcactc atcgtatacc tcgcatcagt cccgaatatc 2701 gtatacctca catggcgatc tactcggcgg catggccgtc atgggcgtca gcacaatgac 2761 caaggagagc aaattgcgca accgcaacac acgcaatcaa tcagtgggcg ccaccaatgg 2821 cggcaccacc tgcctggaca ccaatcacaa gctcgagcat cgcgactacg aaatcggtct 2881 ggagtgcacg gacgaagctg gcaagattaa acatcatgac aatcctttta tcgagcccgt 2941 ccagacacaa acggtggtcg acatgaaaga tgtgatggtc ctgaatgaca tcatcgaaca 3001 ggccgctggt cggcacagtc gggcaagcga tcgcggtgag gacgatgacg aggacgggcc 3061 gacgttcaaa gacaaggcac tcgaagtgat cctaaagggc atcgatgtgt tttgtgtgtg 3121 ggactgttgc tgggtttggt tgaaattgca ggagtggatc tcgctgatcg tcttcgatcc 3181 cttcgtcgag ctcttcatca cgctgtgcat tgtggtcaac acgatgttca tggcgatgga 3241 tcaccacgat atgaacaagg agatggagcg cgtgctcaag agtggcaact atttcttcac 3301 ggccaccttt gccatcgagg ccaccatgaa gctgtgcgcc atgagcccca agtactattt 3361 ccaggagggc tggaacatct tcgacttcat catcgtggcc ctgtcgcttt tggagctggg 3421 tctcgagggc gtccagggcc tgtccgtctt gcgttcgttt cgattgctgc gtgtatttaa 3481 attggccaaa tcttggccaa cacttaattt actcatttcg attatgggac gcaccatggg 3541 cgctttgggt aatctgacat ttgtactttg cattatcatc ttcatctttg cggtgatggg 3601 aatgcaactg ttcggaaaga attatcatga tcacaaggac cgtttcccgg atggcgacct 3661 gccgcgctgg aacttcaccg actttatgca cagcttcatg atcgtgttcc gggtgctctg 3721 cggcgaatgg atcgagtcca tgtgggactg tatgtacgtg ggcgatgtct cgtgcattcc 3781 cttcttcttg gccaccgttg tcatcggcaa tcttgtggta cttaaccttt tcttagcctt 3841 gcttttgtcc aattttggct catctagctt atcagcgccg actgccgata acgatacgaa 3901 taaaatagcc gaggccttca atcgaattgg ccgatttaaa agttgggtta agcgtaatat 3961 tgctgattgt ttcaagttaa tacgtaacaa attgacaaat caaataagtg atcaaccatc 4021 agagcatggt gacaacgaac tggagctggg gcacgacgag atcctcgccg atggcctgat 4081 caagaaggga atcaaggagc agacgcaact ggaggtggcc atcggggatg gcatggagtt 4141 cacgatacac ggcgacatga agaacaacaa gccgaagaaa tccaaatatc taaataacgc 4201 aacgatgatt ggcaactcaa ttaaccacca agacaataga ctggaacacg agctaaacca 4261 tagaggtttg tccttacagg acgacgacac tgccagcatt aactcatatg gtagccataa 4321 gaatcgacca ttcaaggacg agagccacaa gggcagcgcc gagacgatgg agggcgagga 4381 gaagcgcgac gccagcaagg aggatttagg tctcgacgag gaactggacg aggagggcga 4441 atgcgaggag ggcccgctcg acggtgatat cattattcat gcacacgacg aggatatact 4501 cgatgaatat ccagctgatt gctgccccga ttcgtactat aagaaatttc cgatcttagc 4561 cggtgacgat gactcgccgt tctggcaagg atggggcaat ttacgactga aaacttttca 4621 attaattgaa aataaatatt ttgaaacagc tgttatcact atgattttaa tgagtagctt 4681 agctttggca ttagaagatg tacatctgcc acaaagaccc atactgcagg atattttata 4741 ctatatggac agaatattta cggttatatt cttcttggaa atgttaatca agtggttggc 4801 gctcggcttc aaagtgtact tcaccaacgc gtggtgttgg ctcgatttcg tgattgtcat 4861 gctgtcgcta attaatttgg ccgcggtctg gtccggggcc gacgatgtgc ccgcctttcg 4921 ctcgatgcga actctgcgcg ccctgcgacc tctgcgggca gtttcgcgct gggagggcat 4981 gaaagtcgtc gttaatgcgc tggtacaagc tataccgtcc atcttcaatg tgctattggt 5041 gtgtctaata ttttggctaa tttttgccat aatgggtgta cagctttttg ctggaaaata 5101 ttttaagtgc gaggacatga acggcacgaa gctcagccac gagatcatac caaatcgcaa 5161 tgcctgcgag agcgagaact acacgtgggt gaattcagca atgaatttcg atcatgtagg 5221 taacgcgtat ctgtgccttt tccaagtggc caccttcaaa ggctggatac aaataatgaa 5281 cgatgctatc gattcacgag aggtggacaa gcaaccaatt cgtgaaacga acatctacat 5341 gtatttatat ttcgtattct tcatcatatt tggatcattt ttcacactca atctgttcat 5401 tggtgttatc attgataatt ttaatgagca aaagaaaaaa gcaggtggat cattagaaat 5461 gttcatgaca gaagatcaga aaaagtacta taatgctatg aaaaagatgg gctctaaaaa 5521 accattaaaa gccattccaa gaccaaggtg gcgaccacaa gcaatagtct ttgaaatagt 5581 aaccgataag aaattcgata taatcattat gttattcatt ggtctgaaca tgttcaccat 5641 gaccctcgat cgttacgatg cgtcggacac gtacaacgcg gtcctagact atctcaatgc 5701 gatattcgta gttattttca gttccgaatg tctattaaaa atattcgctt tacgatatca 5761 ctattttatt gagccatgga atttatttga tgtagtagtt gtcattttat ccatcttagg 5821 tctcgtactt agcgatatta tcgagaagta cttcgtgtcg ccgaccctgc tccgagtggt 5881 gcgtgtggcg aaagtgggtc gagtcctgcg actggtgaag ggcgccaagg gcatcaggac 5941 actgctattc gcgttggcca tgtcgctgcc ggccctcttc aacatctgcc tgctgctgtt 6001 cctggtcatg ttcatcttcg ccatcttcgg catgtcgttc ttcatgcacg tgaaggagaa 6061 gagcggcatc aacgacgtct acaacttcaa gacctttggt cagagcatga tcctgctctt 6121 tcagatgtcg acgtcagccg gttgggatgg tgtactggac gccattatca atgaggaagc 6181 atgcgatcca cccgacaacg acaaaggcta tccgggcaat tgtggttcag cgaccgttgg 6241 aataacgttt ctcctctcat acctagttat aagctttttg atagttatta atatgtacat 6301 tgctgtcatt ctcgagaact atagtcaggc caccgaggac gtgcaagagg gtctaaccga 6361 cgacgactac gacatgtact acgagatctg gcagcaattc gatccggagg gcacccagta 6421 tatacgctac gaccagctgt ccgaattcct ggacgtgctg gagcccccgc tgcagatcca 6481 taagccgaac aagtacaaga tcatatcgat ggacataccc atctgtcgcg gcgacctcat 6541 gtactgtgtc gacatcctcg acgccctcac gaaagacttc tttgcgcgca agggcaatcc 6601 gattgaggag acgggcgaga tcggtgagat agccgcccgt ccggacacgg agggctatga 6661 gcccgtctca tcgacgctgt ggcgccagcg ggaggagtac tgtgcccgtc tcatccagca 6721 cgcctggcgg aagcacaagg cgcgcggcga gggcggtggt ggtggtggtg ggtccttcga 6781 gccggatccg gatcaggtcg atggcgatgg tggtggcgat ccggatgccg gggagcctgc 6841 aaacgacgaa ccggcggatg ggatggctga ggcccccgca ggaggaggag gaggaggagg 6901 aggaggagat ggtagtgtta atggtggagg aactggaact ggaactggag acggagctgc 6961 cgatgctgcc gacgagagca atgtaaatag tccgggtgag gatgcagcgt cggcggcagc 7021 aggagcggcg acaggagcga cggcgggaag tcccggggcg ggcagcgccg gacgacagac 7081 cgccgttctc gtggagagcg acgggttcgt gacgaagaac ggccacaagg tggtcatcca 7141 ctcgcgatcg ccgagcatca cgtcgcgcac ggcggatgtc tgagccaggc ctcgcccccc 7201 cctccaagat gcacgcgagt attagcatga gtacgtgttg gatgttgcat gttgcgtgtt 7261 gcgcgttggg tgcttaacca atccagtgcg tcatgtgcaa ctaaacagtg agctaacaac 7321 aacagcgaac aaggcgaaca acaagcataa ttttctgcta tatataatga aagtacacca 7381 tacaacaaaa caatcgaaac aaaccaacaa cagtaacaac atcatcaaga gaacaaccac 7441 aacaacaaca gtaacaacaa tcgatgaaat aacgaagaag aacaacaaca acaccagtgt 7501 aatgtctttg agttacaaaa catacataca tacatataca tactatatat ttgtataccc 7561 gcattattca gttaacgagt cagcaaccaa caacaatcat acttaagcta aacaaccgaa 7621 atgtcgaaat attttgtaag cagctcgtag tccaatccat ttaggcgttt tttccaaacc 7681 aaacaatttg cctaagcagg tggaagaaga agtaaaacat caacacaccc acactagagc 7741 ttgaaaatga tcgataaata ccgattcgat aatatcgatg ttttcaaggc aaaacacata 7801 tttaatatcg agaaagtgca aactgtcgat attttccaag ctctaacata cacacaaaac 7861 ccacacacaa cacactcaca cataaccata aacaaatata atcccaaaaa acaaaaaacc 7921 aaaaccgata acaaagttaa agaacgatga acaagctcta aaaattgtat ttgccagtag 7981 tgggacaaca aacaacacgc ttgatttaat taactaccaa ac