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LOCUS XM_017144146 8055 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X7, mRNA. ACCESSION XM_017144146 VERSION XM_017144146.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144146.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8055 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8055 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 16 Proteins" /db_xref="GeneID:108059094" CDS 785..7216 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X7" /protein_id="XP_016999635.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL EDIDPFYSNVLTFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFII TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDE GISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNI RRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENG AIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRN QSVGATNGGTTCLDTNHKLEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKD VMVLNDIIEQAAGRHSRASDRGEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLK LQEWISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIE ATMKLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKS WPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPR WNFTDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLAL LLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQ PSEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNNKPKKSKY LNNATMIGNSINHQDNRLEHELNHRGLSLQDDDTASINSYGSHKNRPFKDESHKGSAE TMEGEEKRDASKEDLGLDEELDEEGECEEGPLDGDIIIHAHDEDILDEYPADCCPDSY YKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALALEDVHLP QRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMVSLINFVA SLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLLVCLIFWL IFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFDHVGNAYL CLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFTLNLFIGV IIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQAIVFEIV TDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECLLKIFALR YHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVLRLVKGAK GIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVYNFKTFGQ SMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLLSYLVISF LIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRYDQLSEFL DVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGNPIEETGEIG EIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKARGEGGGGGGGSFEPDPDQV DGDGGGDPDAGEPANDEPADGMAEAPAGGGGGGGGGDGSVNGGGTGTGTGDGAADAAD ESNVNSPGEDAASAAAGAATGATAGSPGAGSAGRQTAVLVESDGFVTKNGHKVVIHSR SPSITSRTADV" misc_feature 1238..2092 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2447..3004 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3209..3844 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3920..4654 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 4664..5479 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5447..5605 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5492..5503 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5627..6379 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6410..6553 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acacgcgctg cggcagctga cagtttcagt aaaccacgga gacgaacgga ttacggctct 61 gggaacaaaa cgcaacgttt gatgaaaatt tttggcaact cgtcgcgtcg tcttggttgt 121 tgttaaccac atcctgctaa cgccaaagtc cgaaaataaa attcaaccca aatacccaaa 181 aataacacag atcaaacaaa caaagcaaaa aaaaagcaaa caaaataaca aaaaaaaacc 241 aaaaaaaaaa acaaacaaaa aattcatctt ctacttgttc taccgcttca actttattcg 301 tcttcgtctc cgtaataaat atataaaaag tatatacata tatatatata tatatatgca 361 tatgtgtgtg agtgcgtcgc gtgtgtgttg gtgcctgtaa atgtgtgagc cacaacaaca 421 acaacagcag cagcagccag agccagagca acaaccacag cagcagcaac aacaacaaca 481 acaacagtag ttaacagcag caacaattct tagcagcaat aacaatacaa gcaagcacca 541 ccacaacaac aagagcagca acaacaccaa aaacagccac aatagcaatc acaataacaa 601 catcaaagga tagagcgagc agccaagcac aacatcgatt gacatcgatt aacgcatcgt 661 gctaagcggc gggcgctaat cgaacatggc gcctcggata tagttgtagc tttaatgtag 721 caggcgacat ccatgtgcct catgccttgg aaatctaagg ctctcatcgt tggccgcata 781 gacaatgaca gaagattccg actcgatatc tgaggaagaa cgcagtttgt tccgtccctt 841 tacccgcgaa tcattggtgc aaatcgaaca acgcattgcc gctgaacatg aaaagcagaa 901 ggagctggaa agaaagagag ccgagggaga ggtgccgcaa tatggtcgca agaaaaaaca 961 aaaagaaatc cgatatgatg acgaggacga ggatgaaggt ccacaaccgg atcctacact 1021 tgaacagggt gtgccaatac ctgttcgatt gcagggcagc ttcccgccgg aattggcctc 1081 cactcctctc gaggatatcg atcccttcta cagcaatgta ctgacattcg tagttgtaag 1141 caaaggaaaa gatatttttc gcttttctgc atcaaaagca atgtggatgc tcgatccatt 1201 caatccgata cgtcgtgtgg ccatttacat tctagtgcat ccattatttt ccctattcat 1261 catcaccaca attctcgtca actgcatcct gatgataatg ccgacaacgc ccacggttga 1321 gtccactgag gtgatattca ccggaatcta cacatttgaa tcagctgtta aagtgatggc 1381 acgaggtttc attttatgcc cgtttacgta tcttagagat gcatggaatt ggctggactt 1441 cgtagtaata gctttagctt atgtgaccat gggtatagat ttaggtaatc tagcagcctt 1501 gcgaacgttt agggtgctgc gagcgcttaa aaccgtagcc attgtgccag gcttgaagac 1561 catcgtcggc gccgtcatcg aatcggtgaa gaatctgcgc gatgtgataa tcctcaccat 1621 gttctccctg tcggtcttcg cgctgatggg cctgcagatc tacatgggcg tgctcacgca 1681 gaagtgcatc aagaagttcc cgctggacgg ctcctggggc aatctgaccg acgagaactg 1741 ggactatcac aatcgcaaca gctccaattg gtactcggag gacgagggca tctcatttcc 1801 gctgtgcggc aatatatccg gcgcggggca atgcgacgat gactacgtgt gtctgcaggg 1861 gtttgggccg aatccgaact acggctacac cagcttcgat tcattcggct gggccttcct 1921 gtccgccttc cggctgatga cacaggactt ctgggaggac ctctaccagc tggtgttgcg 1981 cgccgccgga ccatggcaca tgctgttctt tatagtcatc atcttcctag gttcattcta 2041 tcttgtgaat ttgattttgg ccattgttgc catgtcgtat gacgaattgc aaaagaaggc 2101 cgaagaagaa gaggctgccg aagaggaggc gatacgtgaa gcggaggagg ctgccgccgc 2161 caaagctgcc aagctggagg agcgggccaa tgcgcaggct caggcagcag cggatgcggc 2221 tgccgccgaa gaggctgcac tgcatccgga gatggccaag agtccgacgt attcgtgcat 2281 cagctatgag cttttcgttg gcggcgagaa gggcaacgat gacaacaaca aggagaagat 2341 gtccattcgc agcgtcgagg tggagtcgga gtcggtgagc gttatacaaa gacaaccagc 2401 acctaccaca gcacaccaag ctaccaaagt tcgtaaagtg agcacgacat ccttatcctt 2461 acctggttca ccgtttaaca tacgcagggg atcacgtagt tctcacaagt acacgatacg 2521 gaacggacgt ggccgctttg gtatacccgg tagcgatcgc aagccgttgg tattgtcaac 2581 atatcaggat gcccagcagc acttgcccta tgccgacgac tcgaatgccg tcaccccgat 2641 gtccgaggag aacggggcca tcatagtgcc cgtgtactat ggcaacctag gctctcggca 2701 ctcatcgtat acctcgcatc agtcccgaat atcgtatacc tcacatggcg atctactcgg 2761 cggcatggcc gtcatgggcg tcagcacaat gaccaaggag agcaaattgc gcaaccgcaa 2821 cacacgcaat caatcagtgg gcgccaccaa tggcggcacc acctgcctgg acaccaatca 2881 caagctcgag catcgcgact acgaaatcgg tctggagtgc acggacgaag ctggcaagat 2941 taaacatcat gacaatcctt ttatcgagcc cgtccagaca caaacggtgg tcgacatgaa 3001 agatgtgatg gtcctgaatg acatcatcga acaggccgct ggtcggcaca gtcgggcaag 3061 cgatcgcggt gaggacgatg acgaggacgg gccgacgttc aaagacaagg cactcgaagt 3121 gatcctaaag ggcatcgatg tgttttgtgt gtgggactgt tgctgggttt ggttgaaatt 3181 gcaggagtgg atctcgctga tcgtcttcga tcccttcgtc gagctcttca tcacgctgtg 3241 cattgtggtc aacacgatgt tcatggcgat ggatcaccac gatatgaaca aggagatgga 3301 gcgcgtgctc aagagtggca actatttctt cacggccacc tttgccatcg aggccaccat 3361 gaagctgtgc gccatgagcc ccaagtacta tttccaggag ggctggaaca tcttcgactt 3421 catcatcgtg gccctgtcgc ttttggagct gggtctcgag ggcgtccagg gcctgtccgt 3481 cttgcgttcg tttcgattgc tgcgtgtatt taaattggcc aaatcttggc caacacttaa 3541 tttactcatt tcgattatgg gacgcaccat gggcgctttg ggtaatctga catttgtact 3601 ttgcattatc atcttcatct ttgcggtgat gggaatgcaa ctgttcggaa agaattatca 3661 tgatcacaag gaccgtttcc cggatggcga cctgccgcgc tggaacttca ccgactttat 3721 gcacagcttc atgatcgtgt tccgggtgct ctgcggcgaa tggatcgagt ccatgtggga 3781 ctgtatgtac gtgggcgatg tctcgtgcat tcccttcttc ttggccaccg ttgtcatcgg 3841 caatcttgtg gtacttaacc ttttcttagc cttgcttttg tccaattttg gctcatctag 3901 cttatcagcg ccgactgccg ataacgatac gaataaaata gccgaggcct tcaatcgaat 3961 tggccgattt aaaagttggg ttaagcgtaa tattgctgat tgtttcaagt taatacgtaa 4021 caaattgaca aatcaaataa gtgatcaacc atcagagcat ggtgacaacg aactggagct 4081 ggggcacgac gagatcctcg ccgatggcct gatcaagaag ggaatcaagg agcagacgca 4141 actggaggtg gccatcgggg atggcatgga gttcacgata cacggcgaca tgaagaacaa 4201 caagccgaag aaatccaaat atctaaataa cgcaacgatg attggcaact caattaacca 4261 ccaagacaat agactggaac acgagctaaa ccatagaggt ttgtccttac aggacgacga 4321 cactgccagc attaactcat atggtagcca taagaatcga ccattcaagg acgagagcca 4381 caagggcagc gccgagacga tggagggcga ggagaagcgc gacgccagca aggaggattt 4441 aggtctcgac gaggaactgg acgaggaggg cgaatgcgag gagggcccgc tcgacggtga 4501 tatcattatt catgcacacg acgaggatat actcgatgaa tatccagctg attgctgccc 4561 cgattcgtac tataagaaat ttccgatctt agccggtgac gatgactcgc cgttctggca 4621 aggatggggc aatttacgac tgaaaacttt tcaattaatt gaaaataaat attttgaaac 4681 agctgttatc actatgattt taatgagtag cttagctttg gcattagaag atgtacatct 4741 gccacaaaga cccatactgc aggatatttt atactatatg gacagaatat ttacggttat 4801 attcttcttg gaaatgttaa tcaagtggtt ggcgctcggc ttcaaagtgt acttcaccaa 4861 cgcgtggtgt tggctcgatt tcgtgattgt catggtatcg cttatcaact tcgttgcttc 4921 acttgttgga gctggtggta ttcaagcctt caagactatg cgaacgttaa gagcactgag 4981 accactacgt gccatgtccc gtatgcaggg catgagggtc gtcgttaatg cgctggtaca 5041 agctataccg tccatcttca atgtgctatt ggtgtgtcta atattttggc taatttttgc 5101 cataatgggt gtacagcttt ttgctggaaa atattttaag tgcgaggaca tgaacggcac 5161 gaagctcagc cacgagatca taccaaatcg caatgcctgc gagagcgaga actacacgtg 5221 ggtgaattca gcaatgaatt tcgatcatgt aggtaacgcg tatctgtgcc ttttccaagt 5281 ggccaccttc aaaggctgga tacaaataat gaacgatgct atcgattcac gagaggtgga 5341 caagcaacca attcgtgaaa cgaacatcta catgtattta tatttcgtat tcttcatcat 5401 atttggatca tttttcacac tcaatctgtt cattggtgtt atcattgata attttaatga 5461 gcaaaagaaa aaagcaggtg gatcattaga aatgttcatg acagaagatc agaaaaagta 5521 ctataatgct atgaaaaaga tgggctctaa aaaaccatta aaagccattc caagaccaag 5581 gtggcgacca caagcaatag tctttgaaat agtaaccgat aagaaattcg atataatcat 5641 tatgttattc attggtctga acatgttcac catgaccctc gatcgttacg atgcgtcgga 5701 cacgtacaac gcggtcctag actatctcaa tgcgatattc gtagttattt tcagttccga 5761 atgtctatta aaaatattcg ctttacgata tcactatttt attgagccat ggaatttatt 5821 tgatgtagta gttgtcattt tatccatctt aggtctcgta cttagcgata ttatcgagaa 5881 gtacttcgtg tcgccgaccc tgctccgagt ggtgcgtgtg gcgaaagtgg gtcgagtcct 5941 gcgactggtg aagggcgcca agggcatcag gacactgcta ttcgcgttgg ccatgtcgct 6001 gccggccctc ttcaacatct gcctgctgct gttcctggtc atgttcatct tcgccatctt 6061 cggcatgtcg ttcttcatgc acgtgaagga gaagagcggc atcaacgacg tctacaactt 6121 caagaccttt ggtcagagca tgatcctgct ctttcagatg tcgacgtcag ccggttggga 6181 tggtgtactg gacgccatta tcaatgagga agcatgcgat ccacccgaca acgacaaagg 6241 ctatccgggc aattgtggtt cagcgaccgt tggaataacg tttctcctct catacctagt 6301 tataagcttt ttgatagtta ttaatatgta cattgctgtc attctcgaga actatagtca 6361 ggccaccgag gacgtgcaag agggtctaac cgacgacgac tacgacatgt actacgagat 6421 ctggcagcaa ttcgatccgg agggcaccca gtatatacgc tacgaccagc tgtccgaatt 6481 cctggacgtg ctggagcccc cgctgcagat ccataagccg aacaagtaca agatcatatc 6541 gatggacata cccatctgtc gcggcgacct catgtactgt gtcgacatcc tcgacgccct 6601 cacgaaagac ttctttgcgc gcaagggcaa tccgattgag gagacgggcg agatcggtga 6661 gatagccgcc cgtccggaca cggagggcta tgagcccgtc tcatcgacgc tgtggcgcca 6721 gcgggaggag tactgtgccc gtctcatcca gcacgcctgg cggaagcaca aggcgcgcgg 6781 cgagggcggt ggtggtggtg gtgggtcctt cgagccggat ccggatcagg tcgatggcga 6841 tggtggtggc gatccggatg ccggggagcc tgcaaacgac gaaccggcgg atgggatggc 6901 tgaggccccc gcaggaggag gaggaggagg aggaggagga gatggtagtg ttaatggtgg 6961 aggaactgga actggaactg gagacggagc tgccgatgct gccgacgaga gcaatgtaaa 7021 tagtccgggt gaggatgcag cgtcggcggc agcaggagcg gcgacaggag cgacggcggg 7081 aagtcccggg gcgggcagcg ccggacgaca gaccgccgtt ctcgtggaga gcgacgggtt 7141 cgtgacgaag aacggccaca aggtggtcat ccactcgcga tcgccgagca tcacgtcgcg 7201 cacggcggat gtctgagcca ggcctcgccc ccccctccaa gatgcacgcg agtattagca 7261 tgagtacgtg ttggatgttg catgttgcgt gttgcgcgtt gggtgcttaa ccaatccagt 7321 gcgtcatgtg caactaaaca gtgagctaac aacaacagcg aacaaggcga acaacaagca 7381 taattttctg ctatatataa tgaaagtaca ccatacaaca aaacaatcga aacaaaccaa 7441 caacagtaac aacatcatca agagaacaac cacaacaaca acagtaacaa caatcgatga 7501 aataacgaag aagaacaaca acaacaccag tgtaatgtct ttgagttaca aaacatacat 7561 acatacatat acatactata tatttgtata cccgcattat tcagttaacg agtcagcaac 7621 caacaacaat catacttaag ctaaacaacc gaaatgtcga aatattttgt aagcagctcg 7681 tagtccaatc catttaggcg ttttttccaa accaaacaat ttgcctaagc aggtggaaga 7741 agaagtaaaa catcaacaca cccacactag agcttgaaaa tgatcgataa ataccgattc 7801 gataatatcg atgttttcaa ggcaaaacac atatttaata tcgagaaagt gcaaactgtc 7861 gatattttcc aagctctaac atacacacaa aacccacaca caacacactc acacataacc 7921 ataaacaaat ataatcccaa aaaacaaaaa accaaaaccg ataacaaagt taaagaacga 7981 tgaacaagct ctaaaaattg tatttgccag tagtgggaca acaaacaaca cgcttgattt 8041 aattaactac caaac