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LOCUS XM_017144144 8076 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X5, mRNA. ACCESSION XM_017144144 VERSION XM_017144144.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144144.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8076 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8076 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 12 Proteins" /db_xref="GeneID:108059094" CDS 785..7237 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X5" /protein_id="XP_016999633.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPLEDIDPFYSNVL TFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFIITTILVNCILMI MPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLDFVVIALAYVTM GIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVIILTMFSLSVFAL MGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDEGISFPLCGNIS GAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWEDLYQLVLRAAGP WHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAIREAEEAAAAKA AKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGEKGNDDNNKEKM SIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNIRRGSRSSHKYT IRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENGAIIVPVYYGNL GSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRNQSVGATNGGTT CLDTNHKLEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKDVMVLNDIIEQA AGRHSRASDRGVSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVWDCCWVWLKLQE WISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYFFTATFAIEATM KLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLLRVFKLAKSWPT LNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDRFPDGDLPRWNF TDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLVVLNLFLALLLS NFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNKLTNQISDQPSG KGVCRCISAEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKNN KPKKSKYLNNATMIGNSINHQDNRLEHELNHRGLSLQDDDTASINSYGSHKNRPFKDE SHKGSAETMEGEEKRDASKEDLGLDEELDEEGECEEGPLDGDIIIHAHDEDILDEYPA DCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLALA LEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVMV SLINFVASLVGAGGIQAFKTMRTLRALRPLRAMSRMQGMRVVVNALVQAIPSIFNVLL VCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNFD HVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFFT LNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRPQ AIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSECL LKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRVL RLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDVY NFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFLL SYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIRY DQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGNPI EETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKARGEGGGGGGGSF EPDPDQVDGDGGGDPDAGEPANDEPADGMAEAPAGGGGGGGGGDGSVNGGGTGTGTGD GAADAADESNVNSPGEDAASAAAGAATGATAGSPGAGSAGRQTAVLVESDGFVTKNGH KVVIHSRSPSITSRTADV" misc_feature 1205..2059 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2414..2971 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3200..3835 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3911..4675 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 4685..5500 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5468..5626 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5513..5524 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5648..6400 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6431..6574 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acacgcgctg cggcagctga cagtttcagt aaaccacgga gacgaacgga ttacggctct 61 gggaacaaaa cgcaacgttt gatgaaaatt tttggcaact cgtcgcgtcg tcttggttgt 121 tgttaaccac atcctgctaa cgccaaagtc cgaaaataaa attcaaccca aatacccaaa 181 aataacacag atcaaacaaa caaagcaaaa aaaaagcaaa caaaataaca aaaaaaaacc 241 aaaaaaaaaa acaaacaaaa aattcatctt ctacttgttc taccgcttca actttattcg 301 tcttcgtctc cgtaataaat atataaaaag tatatacata tatatatata tatatatgca 361 tatgtgtgtg agtgcgtcgc gtgtgtgttg gtgcctgtaa atgtgtgagc cacaacaaca 421 acaacagcag cagcagccag agccagagca acaaccacag cagcagcaac aacaacaaca 481 acaacagtag ttaacagcag caacaattct tagcagcaat aacaatacaa gcaagcacca 541 ccacaacaac aagagcagca acaacaccaa aaacagccac aatagcaatc acaataacaa 601 catcaaagga tagagcgagc agccaagcac aacatcgatt gacatcgatt aacgcatcgt 661 gctaagcggc gggcgctaat cgaacatggc gcctcggata tagttgtagc tttaatgtag 721 caggcgacat ccatgtgcct catgccttgg aaatctaagg ctctcatcgt tggccgcata 781 gacaatgaca gaagattccg actcgatatc tgaggaagaa cgcagtttgt tccgtccctt 841 tacccgcgaa tcattggtgc aaatcgaaca acgcattgcc gctgaacatg aaaagcagaa 901 ggagctggaa agaaagagag ccgagggaga ggtgatccga tatgatgacg aggacgagga 961 tgaaggtcca caaccggatc ctacacttga acagggtgtg ccaatacctg ttcgattgca 1021 gggcagcttc ccgccggaat tggcctccac tcctctcgag gatatcgatc ccttctacag 1081 caatgtactg acattcgtag ttgtaagcaa aggaaaagat atttttcgct tttctgcatc 1141 aaaagcaatg tggatgctcg atccattcaa tccgatacgt cgtgtggcca tttacattct 1201 agtgcatcca ttattttccc tattcatcat caccacaatt ctcgtcaact gcatcctgat 1261 gataatgccg acaacgccca cggttgagtc cactgaggtg atattcaccg gaatctacac 1321 atttgaatca gctgttaaag tgatggcacg aggtttcatt ttatgcccgt ttacgtatct 1381 tagagatgca tggaattggc tggacttcgt agtaatagct ttagcttatg tgaccatggg 1441 tatagattta ggtaatctag cagccttgcg aacgtttagg gtgctgcgag cgcttaaaac 1501 cgtagccatt gtgccaggct tgaagaccat cgtcggcgcc gtcatcgaat cggtgaagaa 1561 tctgcgcgat gtgataatcc tcaccatgtt ctccctgtcg gtcttcgcgc tgatgggcct 1621 gcagatctac atgggcgtgc tcacgcagaa gtgcatcaag aagttcccgc tggacggctc 1681 ctggggcaat ctgaccgacg agaactggga ctatcacaat cgcaacagct ccaattggta 1741 ctcggaggac gagggcatct catttccgct gtgcggcaat atatccggcg cggggcaatg 1801 cgacgatgac tacgtgtgtc tgcaggggtt tgggccgaat ccgaactacg gctacaccag 1861 cttcgattca ttcggctggg ccttcctgtc cgccttccgg ctgatgacac aggacttctg 1921 ggaggacctc taccagctgg tgttgcgcgc cgccggacca tggcacatgc tgttctttat 1981 agtcatcatc ttcctaggtt cattctatct tgtgaatttg attttggcca ttgttgccat 2041 gtcgtatgac gaattgcaaa agaaggccga agaagaagag gctgccgaag aggaggcgat 2101 acgtgaagcg gaggaggctg ccgccgccaa agctgccaag ctggaggagc gggccaatgc 2161 gcaggctcag gcagcagcgg atgcggctgc cgccgaagag gctgcactgc atccggagat 2221 ggccaagagt ccgacgtatt cgtgcatcag ctatgagctt ttcgttggcg gcgagaaggg 2281 caacgatgac aacaacaagg agaagatgtc cattcgcagc gtcgaggtgg agtcggagtc 2341 ggtgagcgtt atacaaagac aaccagcacc taccacagca caccaagcta ccaaagttcg 2401 taaagtgagc acgacatcct tatccttacc tggttcaccg tttaacatac gcaggggatc 2461 acgtagttct cacaagtaca cgatacggaa cggacgtggc cgctttggta tacccggtag 2521 cgatcgcaag ccgttggtat tgtcaacata tcaggatgcc cagcagcact tgccctatgc 2581 cgacgactcg aatgccgtca ccccgatgtc cgaggagaac ggggccatca tagtgcccgt 2641 gtactatggc aacctaggct ctcggcactc atcgtatacc tcgcatcagt cccgaatatc 2701 gtatacctca catggcgatc tactcggcgg catggccgtc atgggcgtca gcacaatgac 2761 caaggagagc aaattgcgca accgcaacac acgcaatcaa tcagtgggcg ccaccaatgg 2821 cggcaccacc tgcctggaca ccaatcacaa gctcgagcat cgcgactacg aaatcggtct 2881 ggagtgcacg gacgaagctg gcaagattaa acatcatgac aatcctttta tcgagcccgt 2941 ccagacacaa acggtggtcg acatgaaaga tgtgatggtc ctgaatgaca tcatcgaaca 3001 ggccgctggt cggcacagtc gggcaagcga tcgcggtgtc tccgtttact attttccaac 3061 agaggacgat gacgaggacg ggccgacgtt caaagacaag gcactcgaag tgatcctaaa 3121 gggcatcgat gtgttttgtg tgtgggactg ttgctgggtt tggttgaaat tgcaggagtg 3181 gatctcgctg atcgtcttcg atcccttcgt cgagctcttc atcacgctgt gcattgtggt 3241 caacacgatg ttcatggcga tggatcacca cgatatgaac aaggagatgg agcgcgtgct 3301 caagagtggc aactatttct tcacggccac ctttgccatc gaggccacca tgaagctgtg 3361 cgccatgagc cccaagtact atttccagga gggctggaac atcttcgact tcatcatcgt 3421 ggccctgtcg cttttggagc tgggtctcga gggcgtccag ggcctgtccg tcttgcgttc 3481 gtttcgattg ctgcgtgtat ttaaattggc caaatcttgg ccaacactta atttactcat 3541 ttcgattatg ggacgcacca tgggcgcttt gggtaatctg acatttgtac tttgcattat 3601 catcttcatc tttgcggtga tgggaatgca actgttcgga aagaattatc atgatcacaa 3661 ggaccgtttc ccggatggcg acctgccgcg ctggaacttc accgacttta tgcacagctt 3721 catgatcgtg ttccgggtgc tctgcggcga atggatcgag tccatgtggg actgtatgta 3781 cgtgggcgat gtctcgtgca ttcccttctt cttggccacc gttgtcatcg gcaatcttgt 3841 ggtacttaac cttttcttag ccttgctttt gtccaatttt ggctcatcta gcttatcagc 3901 gccgactgcc gataacgata cgaataaaat agccgaggcc ttcaatcgaa ttggccgatt 3961 taaaagttgg gttaagcgta atattgctga ttgtttcaag ttaatacgta acaaattgac 4021 aaatcaaata agtgatcaac catcaggcaa aggcgtttgt cgttgtatat ctgcagagca 4081 tggtgacaac gaactggagc tggggcacga cgagatcctc gccgatggcc tgatcaagaa 4141 gggaatcaag gagcagacgc aactggaggt ggccatcggg gatggcatgg agttcacgat 4201 acacggcgac atgaagaaca acaagccgaa gaaatccaaa tatctaaata acgcaacgat 4261 gattggcaac tcaattaacc accaagacaa tagactggaa cacgagctaa accatagagg 4321 tttgtcctta caggacgacg acactgccag cattaactca tatggtagcc ataagaatcg 4381 accattcaag gacgagagcc acaagggcag cgccgagacg atggagggcg aggagaagcg 4441 cgacgccagc aaggaggatt taggtctcga cgaggaactg gacgaggagg gcgaatgcga 4501 ggagggcccg ctcgacggtg atatcattat tcatgcacac gacgaggata tactcgatga 4561 atatccagct gattgctgcc ccgattcgta ctataagaaa tttccgatct tagccggtga 4621 cgatgactcg ccgttctggc aaggatgggg caatttacga ctgaaaactt ttcaattaat 4681 tgaaaataaa tattttgaaa cagctgttat cactatgatt ttaatgagta gcttagcttt 4741 ggcattagaa gatgtacatc tgccacaaag acccatactg caggatattt tatactatat 4801 ggacagaata tttacggtta tattcttctt ggaaatgtta atcaagtggt tggcgctcgg 4861 cttcaaagtg tacttcacca acgcgtggtg ttggctcgat ttcgtgattg tcatggtatc 4921 gcttatcaac ttcgttgctt cacttgttgg agctggtggt attcaagcct tcaagactat 4981 gcgaacgtta agagcactga gaccactacg tgccatgtcc cgtatgcagg gcatgagggt 5041 cgtcgttaat gcgctggtac aagctatacc gtccatcttc aatgtgctat tggtgtgtct 5101 aatattttgg ctaatttttg ccataatggg tgtacagctt tttgctggaa aatattttaa 5161 gtgcgaggac atgaacggca cgaagctcag ccacgagatc ataccaaatc gcaatgcctg 5221 cgagagcgag aactacacgt gggtgaattc agcaatgaat ttcgatcatg taggtaacgc 5281 gtatctgtgc cttttccaag tggccacctt caaaggctgg atacaaataa tgaacgatgc 5341 tatcgattca cgagaggtgg acaagcaacc aattcgtgaa acgaacatct acatgtattt 5401 atatttcgta ttcttcatca tatttggatc atttttcaca ctcaatctgt tcattggtgt 5461 tatcattgat aattttaatg agcaaaagaa aaaagcaggt ggatcattag aaatgttcat 5521 gacagaagat cagaaaaagt actataatgc tatgaaaaag atgggctcta aaaaaccatt 5581 aaaagccatt ccaagaccaa ggtggcgacc acaagcaata gtctttgaaa tagtaaccga 5641 taagaaattc gatataatca ttatgttatt cattggtctg aacatgttca ccatgaccct 5701 cgatcgttac gatgcgtcgg acacgtacaa cgcggtccta gactatctca atgcgatatt 5761 cgtagttatt ttcagttccg aatgtctatt aaaaatattc gctttacgat atcactattt 5821 tattgagcca tggaatttat ttgatgtagt agttgtcatt ttatccatct taggtctcgt 5881 acttagcgat attatcgaga agtacttcgt gtcgccgacc ctgctccgag tggtgcgtgt 5941 ggcgaaagtg ggtcgagtcc tgcgactggt gaagggcgcc aagggcatca ggacactgct 6001 attcgcgttg gccatgtcgc tgccggccct cttcaacatc tgcctgctgc tgttcctggt 6061 catgttcatc ttcgccatct tcggcatgtc gttcttcatg cacgtgaagg agaagagcgg 6121 catcaacgac gtctacaact tcaagacctt tggtcagagc atgatcctgc tctttcagat 6181 gtcgacgtca gccggttggg atggtgtact ggacgccatt atcaatgagg aagcatgcga 6241 tccacccgac aacgacaaag gctatccggg caattgtggt tcagcgaccg ttggaataac 6301 gtttctcctc tcatacctag ttataagctt tttgatagtt attaatatgt acattgctgt 6361 cattctcgag aactatagtc aggccaccga ggacgtgcaa gagggtctaa ccgacgacga 6421 ctacgacatg tactacgaga tctggcagca attcgatccg gagggcaccc agtatatacg 6481 ctacgaccag ctgtccgaat tcctggacgt gctggagccc ccgctgcaga tccataagcc 6541 gaacaagtac aagatcatat cgatggacat acccatctgt cgcggcgacc tcatgtactg 6601 tgtcgacatc ctcgacgccc tcacgaaaga cttctttgcg cgcaagggca atccgattga 6661 ggagacgggc gagatcggtg agatagccgc ccgtccggac acggagggct atgagcccgt 6721 ctcatcgacg ctgtggcgcc agcgggagga gtactgtgcc cgtctcatcc agcacgcctg 6781 gcggaagcac aaggcgcgcg gcgagggcgg tggtggtggt ggtgggtcct tcgagccgga 6841 tccggatcag gtcgatggcg atggtggtgg cgatccggat gccggggagc ctgcaaacga 6901 cgaaccggcg gatgggatgg ctgaggcccc cgcaggagga ggaggaggag gaggaggagg 6961 agatggtagt gttaatggtg gaggaactgg aactggaact ggagacggag ctgccgatgc 7021 tgccgacgag agcaatgtaa atagtccggg tgaggatgca gcgtcggcgg cagcaggagc 7081 ggcgacagga gcgacggcgg gaagtcccgg ggcgggcagc gccggacgac agaccgccgt 7141 tctcgtggag agcgacgggt tcgtgacgaa gaacggccac aaggtggtca tccactcgcg 7201 atcgccgagc atcacgtcgc gcacggcgga tgtctgagcc aggcctcgcc cccccctcca 7261 agatgcacgc gagtattagc atgagtacgt gttggatgtt gcatgttgcg tgttgcgcgt 7321 tgggtgctta accaatccag tgcgtcatgt gcaactaaac agtgagctaa caacaacagc 7381 gaacaaggcg aacaacaagc ataattttct gctatatata atgaaagtac accatacaac 7441 aaaacaatcg aaacaaacca acaacagtaa caacatcatc aagagaacaa ccacaacaac 7501 aacagtaaca acaatcgatg aaataacgaa gaagaacaac aacaacacca gtgtaatgtc 7561 tttgagttac aaaacataca tacatacata tacatactat atatttgtat acccgcatta 7621 ttcagttaac gagtcagcaa ccaacaacaa tcatacttaa gctaaacaac cgaaatgtcg 7681 aaatattttg taagcagctc gtagtccaat ccatttaggc gttttttcca aaccaaacaa 7741 tttgcctaag caggtggaag aagaagtaaa acatcaacac acccacacta gagcttgaaa 7801 atgatcgata aataccgatt cgataatatc gatgttttca aggcaaaaca catatttaat 7861 atcgagaaag tgcaaactgt cgatattttc caagctctaa catacacaca aaacccacac 7921 acaacacact cacacataac cataaacaaa tataatccca aaaaacaaaa aaccaaaacc 7981 gataacaaag ttaaagaacg atgaacaagc tctaaaaatt gtatttgcca gtagtgggac 8041 aacaaacaac acgcttgatt taattaacta ccaaac