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LOCUS XM_017144143 8079 bp mRNA linear INV 09-DEC-2024 paralytic (para), transcript variant X4, mRNA. ACCESSION XM_017144143 VERSION XM_017144143.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017144143.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..8079 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..8079 /gene="para" /note="sodium voltage-gated channel paralytic; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 14 Proteins" /db_xref="GeneID:108059094" CDS 785..7240 /gene="para" /codon_start=1 /product="sodium channel protein para isoform X4" /protein_id="XP_016999632.2" /db_xref="GeneID:108059094" /translation="MTEDSDSISEEERSLFRPFTRESLVQIEQRIAAEHEKQKELERK RAEGEVPQYGRKKKQKEIRYDDEDEDEGPQPDPTLEQGVPIPVRLQGSFPPELASTPL EDIDPFYSNVLTFVVVSKGKDIFRFSASKAMWMLDPFNPIRRVAIYILVHPLFSLFII TTILVNCILMIMPTTPTVESTEVIFTGIYTFESAVKVMARGFILCPFTYLRDAWNWLD FVVIALAYVTMGIDLGNLAALRTFRVLRALKTVAIVPGLKTIVGAVIESVKNLRDVII LTMFSLSVFALMGLQIYMGVLTQKCIKKFPLDGSWGNLTDENWDYHNRNSSNWYSEDE GISFPLCGNISGAGQCDDDYVCLQGFGPNPNYGYTSFDSFGWAFLSAFRLMTQDFWED LYQLVLRAAGPWHMLFFIVIIFLGSFYLVNLILAIVAMSYDELQKKAEEEEAAEEEAI REAEEAAAAKAAKLEERANAQAQAAADAAAAEEAALHPEMAKSPTYSCISYELFVGGE KGNDDNNKEKMSIRSVEVESESVSVIQRQPAPTTAHQATKVRKVSTTSLSLPGSPFNI RRGSRSSHKYTIRNGRGRFGIPGSDRKPLVLSTYQDAQQHLPYADDSNAVTPMSEENG AIIVPVYYGNLGSRHSSYTSHQSRISYTSHGDLLGGMAVMGVSTMTKESKLRNRNTRN QSVGATNGGTTCLDTNHKLEHRDYEIGLECTDEAGKIKHHDNPFIEPVQTQTVVDMKD VMVLNDIIEQAAGRHSRASDRGVSVYYFPTEDDDEDGPTFKDKALEVILKGIDVFCVW DCCWVWLKLQEWISLIVFDPFVELFITLCIVVNTMFMAMDHHDMNKEMERVLKSGNYF FTATFAIEATMKLCAMSPKYYFQEGWNIFDFIIVALSLLELGLEGVQGLSVLRSFRLL RVFKLAKSWPTLNLLISIMGRTMGALGNLTFVLCIIIFIFAVMGMQLFGKNYHDHKDR FPDGDLPRWNFTDFMHSFMIVFRVLCGEWIESMWDCMYVGDVSCIPFFLATVVIGNLV VLNLFLALLLSNFGSSSLSAPTADNDTNKIAEAFNRIGRFKSWVKRNIADCFKLIRNK LTNQISDQPSEHGDNELELGHDEILADGLIKKGIKEQTQLEVAIGDGMEFTIHGDMKN NKPKKSKYLNNATMIGNSINHQDNRLEHELNHRGLSLQDDDTASINSYGSHKNRPFKD ESHKGSAETMEGEEKRDASKEDLGLDEELDEEGECEEGPLDGDIIIHAHDEDILDEYP ADCCPDSYYKKFPILAGDDDSPFWQGWGNLRLKTFQLIENKYFETAVITMILMSSLAL ALEDVHLPQRPILQDILYYMDRIFTVIFFLEMLIKWLALGFKVYFTNAWCWLDFVIVM LSLINLAAVWSGADDVPAFRSMRTLRALRPLRAVSRWEGMKVVVNALVQAIPSIFNVL LVCLIFWLIFAIMGVQLFAGKYFKCEDMNGTKLSHEIIPNRNACESENYTWVNSAMNF DHVGNAYLCLFQVATFKGWIQIMNDAIDSREVDKQPIRETNIYMYLYFVFFIIFGSFF TLNLFIGVIIDNFNEQKKKAGGSLEMFMTEDQKKYYNAMKKMGSKKPLKAIPRPRWRP QAIVFEIVTDKKFDIIIMLFIGLNMFTMTLDRYDASDTYNAVLDYLNAIFVVIFSSEC LLKIFALRYHYFIEPWNLFDVVVVILSILGLVLSDIIEKYFVSPTLLRVVRVAKVGRV LRLVKGAKGIRTLLFALAMSLPALFNICLLLFLVMFIFAIFGMSFFMHVKEKSGINDV YNFKTFGQSMILLFQMSTSAGWDGVLDAIINEEACDPPDNDKGYPGNCGSATVGITFL LSYLVISFLIVINMYIAVILENYSQATEDVQEGLTDDDYDMYYEIWQQFDPEGTQYIR YDQLSEFLDVLEPPLQIHKPNKYKIISMDIPICRGDLMYCVDILDALTKDFFARKGNP IEETGEIGEIAARPDTEGYEPVSSTLWRQREEYCARLIQHAWRKHKARGEGGGGGGGS FEPDPDQVDGDGGGDPDAGEPANDEPADGMAEAPAGGGGGGGGGDGSVNGGGTGTGTG DGAADAADESNVNSPGEDAASAAAGAATGATAGSPGAGSAGRQTAVLVESDGFVTKNG HKVVIHSRSPSITSRTADV" misc_feature 1238..2092 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 2447..3004 /gene="para" /note="Cytoplasmic domain of voltage-gated Na+ ion channel; Region: Na_trans_cytopl; pfam11933" /db_xref="CDD:463401" misc_feature 3233..3868 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 3944..4678 /gene="para" /note="Sodium ion transport-associated; Region: Na_trans_assoc; pfam06512" /db_xref="CDD:461936" misc_feature 4688..5503 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 5471..5629 /gene="para" /note="Inactivation gate of the voltage-gated sodium channel alpha subunits; Region: Na_channel_gate; cd13433" /db_xref="CDD:240441" misc_feature 5516..5527 /gene="para" /note="putative hydrophobic latch; other site" /db_xref="CDD:240441" misc_feature 5651..6403 /gene="para" /note="Ion transport protein; Region: Ion_trans; pfam00520" /db_xref="CDD:459842" misc_feature 6434..6577 /gene="para" /note="Voltage-dependent L-type calcium channel, IQ-associated; Region: GPHH; pfam16905" /db_xref="CDD:465306" ORIGIN 1 acacgcgctg cggcagctga cagtttcagt aaaccacgga gacgaacgga ttacggctct 61 gggaacaaaa cgcaacgttt gatgaaaatt tttggcaact cgtcgcgtcg tcttggttgt 121 tgttaaccac atcctgctaa cgccaaagtc cgaaaataaa attcaaccca aatacccaaa 181 aataacacag atcaaacaaa caaagcaaaa aaaaagcaaa caaaataaca aaaaaaaacc 241 aaaaaaaaaa acaaacaaaa aattcatctt ctacttgttc taccgcttca actttattcg 301 tcttcgtctc cgtaataaat atataaaaag tatatacata tatatatata tatatatgca 361 tatgtgtgtg agtgcgtcgc gtgtgtgttg gtgcctgtaa atgtgtgagc cacaacaaca 421 acaacagcag cagcagccag agccagagca acaaccacag cagcagcaac aacaacaaca 481 acaacagtag ttaacagcag caacaattct tagcagcaat aacaatacaa gcaagcacca 541 ccacaacaac aagagcagca acaacaccaa aaacagccac aatagcaatc acaataacaa 601 catcaaagga tagagcgagc agccaagcac aacatcgatt gacatcgatt aacgcatcgt 661 gctaagcggc gggcgctaat cgaacatggc gcctcggata tagttgtagc tttaatgtag 721 caggcgacat ccatgtgcct catgccttgg aaatctaagg ctctcatcgt tggccgcata 781 gacaatgaca gaagattccg actcgatatc tgaggaagaa cgcagtttgt tccgtccctt 841 tacccgcgaa tcattggtgc aaatcgaaca acgcattgcc gctgaacatg aaaagcagaa 901 ggagctggaa agaaagagag ccgagggaga ggtgccgcaa tatggtcgca agaaaaaaca 961 aaaagaaatc cgatatgatg acgaggacga ggatgaaggt ccacaaccgg atcctacact 1021 tgaacagggt gtgccaatac ctgttcgatt gcagggcagc ttcccgccgg aattggcctc 1081 cactcctctc gaggatatcg atcccttcta cagcaatgta ctgacattcg tagttgtaag 1141 caaaggaaaa gatatttttc gcttttctgc atcaaaagca atgtggatgc tcgatccatt 1201 caatccgata cgtcgtgtgg ccatttacat tctagtgcat ccattatttt ccctattcat 1261 catcaccaca attctcgtca actgcatcct gatgataatg ccgacaacgc ccacggttga 1321 gtccactgag gtgatattca ccggaatcta cacatttgaa tcagctgtta aagtgatggc 1381 acgaggtttc attttatgcc cgtttacgta tcttagagat gcatggaatt ggctggactt 1441 cgtagtaata gctttagctt atgtgaccat gggtatagat ttaggtaatc tagcagcctt 1501 gcgaacgttt agggtgctgc gagcgcttaa aaccgtagcc attgtgccag gcttgaagac 1561 catcgtcggc gccgtcatcg aatcggtgaa gaatctgcgc gatgtgataa tcctcaccat 1621 gttctccctg tcggtcttcg cgctgatggg cctgcagatc tacatgggcg tgctcacgca 1681 gaagtgcatc aagaagttcc cgctggacgg ctcctggggc aatctgaccg acgagaactg 1741 ggactatcac aatcgcaaca gctccaattg gtactcggag gacgagggca tctcatttcc 1801 gctgtgcggc aatatatccg gcgcggggca atgcgacgat gactacgtgt gtctgcaggg 1861 gtttgggccg aatccgaact acggctacac cagcttcgat tcattcggct gggccttcct 1921 gtccgccttc cggctgatga cacaggactt ctgggaggac ctctaccagc tggtgttgcg 1981 cgccgccgga ccatggcaca tgctgttctt tatagtcatc atcttcctag gttcattcta 2041 tcttgtgaat ttgattttgg ccattgttgc catgtcgtat gacgaattgc aaaagaaggc 2101 cgaagaagaa gaggctgccg aagaggaggc gatacgtgaa gcggaggagg ctgccgccgc 2161 caaagctgcc aagctggagg agcgggccaa tgcgcaggct caggcagcag cggatgcggc 2221 tgccgccgaa gaggctgcac tgcatccgga gatggccaag agtccgacgt attcgtgcat 2281 cagctatgag cttttcgttg gcggcgagaa gggcaacgat gacaacaaca aggagaagat 2341 gtccattcgc agcgtcgagg tggagtcgga gtcggtgagc gttatacaaa gacaaccagc 2401 acctaccaca gcacaccaag ctaccaaagt tcgtaaagtg agcacgacat ccttatcctt 2461 acctggttca ccgtttaaca tacgcagggg atcacgtagt tctcacaagt acacgatacg 2521 gaacggacgt ggccgctttg gtatacccgg tagcgatcgc aagccgttgg tattgtcaac 2581 atatcaggat gcccagcagc acttgcccta tgccgacgac tcgaatgccg tcaccccgat 2641 gtccgaggag aacggggcca tcatagtgcc cgtgtactat ggcaacctag gctctcggca 2701 ctcatcgtat acctcgcatc agtcccgaat atcgtatacc tcacatggcg atctactcgg 2761 cggcatggcc gtcatgggcg tcagcacaat gaccaaggag agcaaattgc gcaaccgcaa 2821 cacacgcaat caatcagtgg gcgccaccaa tggcggcacc acctgcctgg acaccaatca 2881 caagctcgag catcgcgact acgaaatcgg tctggagtgc acggacgaag ctggcaagat 2941 taaacatcat gacaatcctt ttatcgagcc cgtccagaca caaacggtgg tcgacatgaa 3001 agatgtgatg gtcctgaatg acatcatcga acaggccgct ggtcggcaca gtcgggcaag 3061 cgatcgcggt gtctccgttt actattttcc aacagaggac gatgacgagg acgggccgac 3121 gttcaaagac aaggcactcg aagtgatcct aaagggcatc gatgtgtttt gtgtgtggga 3181 ctgttgctgg gtttggttga aattgcagga gtggatctcg ctgatcgtct tcgatccctt 3241 cgtcgagctc ttcatcacgc tgtgcattgt ggtcaacacg atgttcatgg cgatggatca 3301 ccacgatatg aacaaggaga tggagcgcgt gctcaagagt ggcaactatt tcttcacggc 3361 cacctttgcc atcgaggcca ccatgaagct gtgcgccatg agccccaagt actatttcca 3421 ggagggctgg aacatcttcg acttcatcat cgtggccctg tcgcttttgg agctgggtct 3481 cgagggcgtc cagggcctgt ccgtcttgcg ttcgtttcga ttgctgcgtg tatttaaatt 3541 ggccaaatct tggccaacac ttaatttact catttcgatt atgggacgca ccatgggcgc 3601 tttgggtaat ctgacatttg tactttgcat tatcatcttc atctttgcgg tgatgggaat 3661 gcaactgttc ggaaagaatt atcatgatca caaggaccgt ttcccggatg gcgacctgcc 3721 gcgctggaac ttcaccgact ttatgcacag cttcatgatc gtgttccggg tgctctgcgg 3781 cgaatggatc gagtccatgt gggactgtat gtacgtgggc gatgtctcgt gcattccctt 3841 cttcttggcc accgttgtca tcggcaatct tgtggtactt aaccttttct tagccttgct 3901 tttgtccaat tttggctcat ctagcttatc agcgccgact gccgataacg atacgaataa 3961 aatagccgag gccttcaatc gaattggccg atttaaaagt tgggttaagc gtaatattgc 4021 tgattgtttc aagttaatac gtaacaaatt gacaaatcaa ataagtgatc aaccatcaga 4081 gcatggtgac aacgaactgg agctggggca cgacgagatc ctcgccgatg gcctgatcaa 4141 gaagggaatc aaggagcaga cgcaactgga ggtggccatc ggggatggca tggagttcac 4201 gatacacggc gacatgaaga acaacaagcc gaagaaatcc aaatatctaa ataacgcaac 4261 gatgattggc aactcaatta accaccaaga caatagactg gaacacgagc taaaccatag 4321 aggtttgtcc ttacaggacg acgacactgc cagcattaac tcatatggta gccataagaa 4381 tcgaccattc aaggacgaga gccacaaggg cagcgccgag acgatggagg gcgaggagaa 4441 gcgcgacgcc agcaaggagg atttaggtct cgacgaggaa ctggacgagg agggcgaatg 4501 cgaggagggc ccgctcgacg gtgatatcat tattcatgca cacgacgagg atatactcga 4561 tgaatatcca gctgattgct gccccgattc gtactataag aaatttccga tcttagccgg 4621 tgacgatgac tcgccgttct ggcaaggatg gggcaattta cgactgaaaa cttttcaatt 4681 aattgaaaat aaatattttg aaacagctgt tatcactatg attttaatga gtagcttagc 4741 tttggcatta gaagatgtac atctgccaca aagacccata ctgcaggata ttttatacta 4801 tatggacaga atatttacgg ttatattctt cttggaaatg ttaatcaagt ggttggcgct 4861 cggcttcaaa gtgtacttca ccaacgcgtg gtgttggctc gatttcgtga ttgtcatgct 4921 gtcgctaatt aatttggccg cggtctggtc cggggccgac gatgtgcccg cctttcgctc 4981 gatgcgaact ctgcgcgccc tgcgacctct gcgggcagtt tcgcgctggg agggcatgaa 5041 agtcgtcgtt aatgcgctgg tacaagctat accgtccatc ttcaatgtgc tattggtgtg 5101 tctaatattt tggctaattt ttgccataat gggtgtacag ctttttgctg gaaaatattt 5161 taagtgcgag gacatgaacg gcacgaagct cagccacgag atcataccaa atcgcaatgc 5221 ctgcgagagc gagaactaca cgtgggtgaa ttcagcaatg aatttcgatc atgtaggtaa 5281 cgcgtatctg tgccttttcc aagtggccac cttcaaaggc tggatacaaa taatgaacga 5341 tgctatcgat tcacgagagg tggacaagca accaattcgt gaaacgaaca tctacatgta 5401 tttatatttc gtattcttca tcatatttgg atcatttttc acactcaatc tgttcattgg 5461 tgttatcatt gataatttta atgagcaaaa gaaaaaagca ggtggatcat tagaaatgtt 5521 catgacagaa gatcagaaaa agtactataa tgctatgaaa aagatgggct ctaaaaaacc 5581 attaaaagcc attccaagac caaggtggcg accacaagca atagtctttg aaatagtaac 5641 cgataagaaa ttcgatataa tcattatgtt attcattggt ctgaacatgt tcaccatgac 5701 cctcgatcgt tacgatgcgt cggacacgta caacgcggtc ctagactatc tcaatgcgat 5761 attcgtagtt attttcagtt ccgaatgtct attaaaaata ttcgctttac gatatcacta 5821 ttttattgag ccatggaatt tatttgatgt agtagttgtc attttatcca tcttaggtct 5881 cgtacttagc gatattatcg agaagtactt cgtgtcgccg accctgctcc gagtggtgcg 5941 tgtggcgaaa gtgggtcgag tcctgcgact ggtgaagggc gccaagggca tcaggacact 6001 gctattcgcg ttggccatgt cgctgccggc cctcttcaac atctgcctgc tgctgttcct 6061 ggtcatgttc atcttcgcca tcttcggcat gtcgttcttc atgcacgtga aggagaagag 6121 cggcatcaac gacgtctaca acttcaagac ctttggtcag agcatgatcc tgctctttca 6181 gatgtcgacg tcagccggtt gggatggtgt actggacgcc attatcaatg aggaagcatg 6241 cgatccaccc gacaacgaca aaggctatcc gggcaattgt ggttcagcga ccgttggaat 6301 aacgtttctc ctctcatacc tagttataag ctttttgata gttattaata tgtacattgc 6361 tgtcattctc gagaactata gtcaggccac cgaggacgtg caagagggtc taaccgacga 6421 cgactacgac atgtactacg agatctggca gcaattcgat ccggagggca cccagtatat 6481 acgctacgac cagctgtccg aattcctgga cgtgctggag cccccgctgc agatccataa 6541 gccgaacaag tacaagatca tatcgatgga catacccatc tgtcgcggcg acctcatgta 6601 ctgtgtcgac atcctcgacg ccctcacgaa agacttcttt gcgcgcaagg gcaatccgat 6661 tgaggagacg ggcgagatcg gtgagatagc cgcccgtccg gacacggagg gctatgagcc 6721 cgtctcatcg acgctgtggc gccagcggga ggagtactgt gcccgtctca tccagcacgc 6781 ctggcggaag cacaaggcgc gcggcgaggg cggtggtggt ggtggtgggt ccttcgagcc 6841 ggatccggat caggtcgatg gcgatggtgg tggcgatccg gatgccgggg agcctgcaaa 6901 cgacgaaccg gcggatggga tggctgaggc ccccgcagga ggaggaggag gaggaggagg 6961 aggagatggt agtgttaatg gtggaggaac tggaactgga actggagacg gagctgccga 7021 tgctgccgac gagagcaatg taaatagtcc gggtgaggat gcagcgtcgg cggcagcagg 7081 agcggcgaca ggagcgacgg cgggaagtcc cggggcgggc agcgccggac gacagaccgc 7141 cgttctcgtg gagagcgacg ggttcgtgac gaagaacggc cacaaggtgg tcatccactc 7201 gcgatcgccg agcatcacgt cgcgcacggc ggatgtctga gccaggcctc gcccccccct 7261 ccaagatgca cgcgagtatt agcatgagta cgtgttggat gttgcatgtt gcgtgttgcg 7321 cgttgggtgc ttaaccaatc cagtgcgtca tgtgcaacta aacagtgagc taacaacaac 7381 agcgaacaag gcgaacaaca agcataattt tctgctatat ataatgaaag tacaccatac 7441 aacaaaacaa tcgaaacaaa ccaacaacag taacaacatc atcaagagaa caaccacaac 7501 aacaacagta acaacaatcg atgaaataac gaagaagaac aacaacaaca ccagtgtaat 7561 gtctttgagt tacaaaacat acatacatac atatacatac tatatatttg tatacccgca 7621 ttattcagtt aacgagtcag caaccaacaa caatcatact taagctaaac aaccgaaatg 7681 tcgaaatatt ttgtaagcag ctcgtagtcc aatccattta ggcgtttttt ccaaaccaaa 7741 caatttgcct aagcaggtgg aagaagaagt aaaacatcaa cacacccaca ctagagcttg 7801 aaaatgatcg ataaataccg attcgataat atcgatgttt tcaaggcaaa acacatattt 7861 aatatcgaga aagtgcaaac tgtcgatatt ttccaagctc taacatacac acaaaaccca 7921 cacacaacac actcacacat aaccataaac aaatataatc ccaaaaaaca aaaaaccaaa 7981 accgataaca aagttaaaga acgatgaaca agctctaaaa attgtatttg ccagtagtgg 8041 gacaacaaac aacacgcttg atttaattaa ctaccaaac