Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]

PREDICTED: Drosophila takahashii uncharacterized protein


LOCUS       XM_017143840            1644 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108058872), mRNA.
ACCESSION   XM_017143840
VERSION     XM_017143840.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017143840.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1644
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1644
                     /gene="LOC108058872"
                     /note="uncharacterized LOC108058872; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108058872"
     CDS             97..1011
                     /gene="LOC108058872"
                     /codon_start=1
                     /product="uncharacterized protein"
                     /protein_id="XP_016999329.2"
                     /db_xref="GeneID:108058872"
                     /translation="MGIDKDCDILRPLIDSEVDELLDLYKVKYGVQNFHYLLLYNQRK
                     WDRQLDEAKIPRDDLNYISMRKQFFTHRNGDFRKWGTYVSLHRDIVQSVSFFSWQPNE
                     AGEMWECLEQTQLIEWTQGALLTNVDLGFCDRVKELAVKRGVTSMQPRQCFGMVLLHE
                     GALSVEVPELLSEFDIRPLQDEDAAMVHETWPNKGEGSLTYLRALIRFNKSLGVCRSD
                     TGELIAWIFQNDFSGLGMLKVLPKAERRGLGGLLAAAMTRRIARGEDVTLTAWIVSTN
                     WRSEALLKRIGYHKEVINEWIKLVPHPA"
     misc_feature    121..510
                     /gene="LOC108058872"
                     /note="Domain of unknown function (DUF5645); Region:
                     DUF5645; pfam18713"
                     /db_xref="CDD:436686"
     misc_feature    727..987
                     /gene="LOC108058872"
                     /note="FR47-like protein; Region: FR47; pfam08445"
                     /db_xref="CDD:117022"
     polyA_site      1644
                     /gene="LOC108058872"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 actgcggcca gctcgccagt cattgggcag cgggcagacg gaaagcacat aaaacaaagc
       61 acaaatcaga tagacagata catatagggc ttgacgatgg gcatcgataa ggactgtgat
      121 attttgcggc cacttatcga cagtgaagta gacgaactgc tcgatctata caaagttaaa
      181 tacggtgtac agaacttcca ctacctgttg ctctataacc agcgaaagtg ggatcgccag
      241 ttggatgagg ctaaaatacc gcgcgatgat ctaaactata tatccatgag gaagcaattc
      301 tttacccatc gaaatgggga cttccgaaag tggggcacct atgtaagtct tcatcgcgac
      361 atcgtgcaga gcgtctcctt cttcagctgg caaccgaatg aggctgggga gatgtgggag
      421 tgcctagagc aaacccaact tattgaatgg acacagggcg ccctgctgac caacgtggat
      481 ctcggatttt gcgatcgggt caaagagttg gccgtcaaac gtggtgtcac ctccatgcaa
      541 ccgcgtcagt gtttcggaat ggttttgctg cacgagggag ccttaagtgt ggaggttcca
      601 gagctgctat ccgagttcga catccggcca ctgcaggacg aggatgcagc tatggtgcac
      661 gaaacttggc ccaacaaggg tgaggggtca ctgacctatc ttcgggccct tattcgcttc
      721 aacaaatcct tgggagtgtg ccgaagtgac accggcgaat tgattgcatg gatcttccaa
      781 aacgacttct ccgggctggg catgcttaaa gtgttgccca aggcagagcg aagagggctt
      841 ggtggccttc tggccgctgc gatgactcga agaatagcca ggggcgagga tgtcacctta
      901 acagcctgga ttgtgtccac caactggcga tcggaagcac tgctaaagcg gatcggatac
      961 cataaagagg tgatcaacga gtggatcaag ctggtgcccc atccggcgta ggagcaccat
     1021 ccatcgttga actggtggcg ctgctgggca ttctgttgga tagttggata tacgataaat
     1081 aggttaggtc aaggagcaca cacggtgatt tgcatttgct ttgcctatgt acattgtcaa
     1141 caattttatt ttttggttca acatgcgcta acgctttctg aatacacttt acggcttaat
     1201 caaatacaaa aacaaattcg aaactagcgg gtgggagggg atatggaaat tgggaactcg
     1261 aactacttat aatatttaca cactccgctc gcctacgaaa ctatatcaaa aatacattac
     1321 gtttatagca ttgctatgcg ttctgggtga acaaacatac atatattacg cacttttgac
     1381 tcaaccggca caacatcgaa atttttcatt ttcgagtttg attactaaaa gaatgtcaca
     1441 gcttacataa tgttatacat tgcgagtcct acataagtat gaggtgtaca aaaaattccg
     1501 gaaaaatatg attttagaat taagacactc tttcagcaaa cgtactaacc actaatcatt
     1561 agccatgtta ttttagcacc gtatggacct tgttttctta ttttattttc aatctaataa
     1621 aaaaggattc ttttatgttt taaa