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LOCUS XM_017143838 1960 bp mRNA linear INV 09-DEC-2024 wap (wap), transcript variant X1, mRNA. ACCESSION XM_017143838 VERSION XM_017143838.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017143838.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1960 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1960 /gene="wap" /note="DDB1 and CUL4 associated factor wap; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108058869" CDS 787..1818 /gene="wap" /codon_start=1 /product="DDB1- and CUL4-associated factor 7" /protein_id="XP_016999327.1" /db_xref="GeneID:108058869" /translation="MSSTAGKRKEIYKYLAPWPLYSMNWSVRPDKRFRLALGSFIEEY NNKVQIISLDEDTSEFSAKSTFDHPYPTTKIMWIPDSKGVYPDLLATSGDYLRVWRAG EPDTRLECVLNNNKNSDFCAPLTSFDWNEVDPNLVGTSSIDTTCTIWGLETGQPHARV YVAGHVKTQLIAHDKEVYDIAFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYED PAHTALLRLAWNKQDPNYLATVAMDSCEVIILDVRVPCTPVARLSNHRACVNGIAWAP HSSCHICTAGDDHQALIWDIQQMPRAIEDPILAYTAAEGEVNQIQWGATQPDWIAICY NKACEILRV" misc_feature 841..1671 /gene="wap" /note="WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from...; Region: WD40; cl29593" /db_xref="CDD:475233" misc_feature order(895..897,919..921,937..942,976..978,988..990, 1057..1059,1081..1083,1114..1116,1144..1146,1198..1200, 1213..1215,1231..1236,1255..1257,1267..1269,1300..1305, 1363..1365,1378..1380,1396..1401,1444..1449,1498..1500, 1513..1515,1534..1539,1576..1581,1636..1638,1648..1650, 1666..1671) /gene="wap" /note="structural tetrad [active]" /db_xref="CDD:238121" misc_feature 1009..1137 /gene="wap" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1159..1299 /gene="wap" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1315..1437 /gene="wap" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1456..1578 /gene="wap" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" misc_feature 1591..1668 /gene="wap" /note="WD40 repeat [structural motif]; Region: WD40 repeat" /db_xref="CDD:293791" polyA_site 1960 /gene="wap" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tggcatcgat tgcttcacag ctaccagctc tagtttttgt gtgtgaaaat tcttgcgaaa 61 agattctgtt aaaagttctt cgatcacaaa ttccgcgcaa cgccgtttac cgcctttgtg 121 ccgccccagc gaattgcgtt tggcccgtcg tttgccaata ccaataggta aagccgacgc 181 agattgcgaa tgcaaaggcc gcacaaacga attgtcgcgt cgcattacgt tttagtgttg 241 ccaacttttc cggagtgccg ggaacatatt aatttcctcg ccgaacggac gcattgcggc 301 cgagatgtgc acgccgctag attgatttgc acgccctgtt tattgggtac actgcggata 361 gtccgatctg tgttctccag cctccaactt gggcggaaaa gcgccggcga aaggcggatt 421 ctagccggaa aacggccaag ctggcagcac tgccagggca caaaaaatga agtgaatttc 481 ggaaaaaggc taagctacag gataagccaa aagtaaagcc tgccggtaga gtgtgcaaat 541 gcgagtggcc agcgaagacc tttgttttcc attccatgac gttttgttga gttgtccgct 601 gctctaaggt ggtcatcatt atcactcact atcatcatta ttatcatcat caacggggtc 661 gtcgtcattc agccagccac ccacaaccac ccaccagaaa aacggccttg aggaaactta 721 acagcacctc atcatccaag tctaaatctt cgccttggtc tgggtatccc atcacagtgt 781 tcagttatgt catcgaccgc cggtaagcgc aaggagatct ataaatatct cgcaccatgg 841 ccactgtact ccatgaactg gagtgtccgg ccggacaagc gattccgact cgcactgggc 901 agcttcatcg aggagtacaa caacaaggtg cagatcatca gcctggacga ggacaccagc 961 gaatttagtg ctaaaagcac ctttgaccat ccatatccga caaccaagat tatgtggata 1021 ccggactcca aaggcgtcta tccggatctg ctggcaacca gcggcgacta tctgcgggtg 1081 tggcgtgccg gcgagccgga cacacggctc gaatgcgtgc tgaataacaa caagaacagc 1141 gacttctgcg ccccgcttac ctcgtttgat tggaacgagg tagatcccaa tcttgtgggc 1201 acctcctcta tagacaccac ttgcactatc tggggactgg agaccggaca gccgcacgcc 1261 cgcgtctatg tggcggggca cgtgaagacg caactgattg cccacgacaa ggaggtctac 1321 gacattgcct tttcgcgggc aggcggtggt cgggacatgt tcgcctcggt gggagcggac 1381 ggatcggtgc gcatgtttga tttgcggcat ttggagcact cgaccattat ctatgaggat 1441 cctgcccaca cggcgctgct gcgcttggcc tggaacaaac aggacccgaa ctatttagcc 1501 accgttgcca tggactcgtg cgaagttata attttagatg ttcgtgttcc ttgtacaccc 1561 gttgcaagac tgagcaatca cagagcgtgc gtcaacggta ttgcgtgggc gccgcatagt 1621 tcctgtcaca tctgcactgc cggtgatgat caccaagcac tgatctggga tatacaacaa 1681 atgccacgcg caatagagga tccaatttta gcctatacag ctgccgaggg cgaagtcaat 1741 cagatccagt ggggcgccac acagcccgac tggatagcca tttgctacaa caaagcgtgc 1801 gagattctgc gggtctaaga gtcaattttt tggtctggtc cctggctata gcacctgttt 1861 gcaattgctg aacaacgcac agtcaaaaaa aaaaacagaa aagtcagaca aaacacacac 1921 cacccacaaa aacacacaca tttgctgttg gaaacttgga