Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017143833 2663 bp mRNA linear INV 09-DEC-2024 (LOC108058866), mRNA. ACCESSION XM_017143833 VERSION XM_017143833.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017143833.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2663 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2663 /gene="LOC108058866" /note="protein phosphatase 1H; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058866" CDS 321..2255 /gene="LOC108058866" /codon_start=1 /product="protein phosphatase 1H" /protein_id="XP_016999322.1" /db_xref="GeneID:108058866" /translation="MFSNIKERFISAIAPDLPPLPGTGERGSASGSGHHHNAPHQRLR FGGSGGQPMPDKFPYARPPFLQLLTSDELRASADHNVRPIIVPRDINLLPWGTGYAEC VNSGKSEWNEDQGAFCRQVLSDPEHKHPDLPYTYFGIFDGHAGYGAALAASHQFHHIL HEKLVDCLELLLPRDADATSGGGDGTKLNPTFPHPIYFQRRVTKDELIIGALESAFFN MDSLIAQDSDRYRDAGGCTACVSLFIDGKMYVANAGDSRAVLCQRRATPDRPQTDAHS GIEPDPLEASCYPVPFSADHTPETERERLLNVARLKPHLMGQHYVAMEYAKRPHIKDM GQRILCRQGTMRGWTYKTLTREDLRMPVVNGEGKRSRLLGTLGVTRGFGDHELLAINT GIQIKPFLTPHPDVRQRDLTQVVCISDEDNRDGDYGVLVMATDGLWDVSENEGVSRTV FQTLSKYPTEKHRYTMVAQELVARARGKINDSGHWRLADSKAAATVDDISVIVIPVSQ YYKEHVEWTQNYKRDLEHRRRQAQANMAQEAVNVLNGVIAEEAHVVEEEEEGEVVVHE ARTSQKQSEKQHQVEEAVDENLVVHLTPSLEQVQLNDTDLAASDIGKEKDTDKDKDVS TTRQHSQPSLQKGRKGKGKH" misc_feature 612..1838 /gene="LOC108058866" /note="Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence...; Region: PP2Cc; cd00143" /db_xref="CDD:238083" misc_feature order(642..644,654..659,741..749,1623..1625,1809..1811) /gene="LOC108058866" /note="active site" /db_xref="CDD:238083" polyA_site 2663 /gene="LOC108058866" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgagtcact gcatgcacgg ccacactggg ctctaatcga tttatttgta aaaaaaagaa 61 atcttaaatc cgcaaagttt tcgctgatta acgtaaaact gttcgccccg tagcctagtg 121 aatcagatcg gagaccccac gtcgccgcct acataagccc gcatactata tacccgatat 181 ttcaggaatt aaaccaaatc aactataaga ggcagcagca caacaacaac gcaagctcgc 241 cacgtcagtg ggagtgagcg agagcgcgtt agcgaagcgc acgagaggga gcaagaggga 301 tagattgcaa aagtagaaat atgtttagta acattaagga gcgttttata tcggccatcg 361 cgccggatct gccgcccctg ccaggcacag gcgagcgggg cagtgcttcc ggaagcggtc 421 accatcacaa tgcgccgcac cagcgcctcc ggttcggcgg ttccggcggt cagccaatgc 481 cggacaagtt tccctacgcc cggccgccct ttctgcaact tctcacatcg gacgaactgc 541 gcgcctcggc ggaccacaat gttcggccca tcatcgttcc gcgggacatc aacctgctgc 601 cctggggcac cggatacgcc gagtgcgtca actccgggaa gtcagagtgg aacgaggacc 661 agggcgcctt ttgccgacaa gttctttcgg atccggagca caagcaccca gatctcccgt 721 acacatactt cggaattttc gacggacacg ccggatatgg agcagcactg gcggcctcgc 781 atcagttcca tcatatcctg cacgagaagc tagtggactg ccttgagctg ctcctgccac 841 gggatgcgga cgccaccagt ggcggagggg atggcacaaa gctaaatccc acattcccgc 901 accccatcta cttccagcgc cgggtgacca aggacgagct aatcatcggt gcactggaga 961 gtgccttttt caacatggac tcgctgatag cgcaggacag tgatcgttat cgagatgccg 1021 gcggctgcac cgcctgcgtt tcattattta ttgatggcaa aatgtatgtg gccaatgccg 1081 gcgactcaag agctgtgctc tgccagcgcc gtgccactcc cgataggcca caaacggatg 1141 cgcactctgg cattgagccg gatccactcg aagctagctg ttacccagtg ccgttctccg 1201 cggatcacac gcccgaaacg gagcgcgaac gcttgctgaa tgtggccaga ttgaagccac 1261 acctaatggg ccaacattat gtggcaatgg agtacgccaa gcggccgcac atcaaggaca 1321 tgggccagcg cattctctgc cggcagggca ctatgcgtgg ctggacctac aagacgctga 1381 ccagggagga tctccgcatg ccggtggtga atggcgaggg caagagaagc cgcttactgg 1441 gcacactggg agtgacgcgt ggctttggcg atcacgagct actggccatc aacacgggta 1501 tacaaataaa acccttcctc accccccatc ccgatgtgag gcagcgagat cttacgcagg 1561 tggtttgcat ttcggatgag gacaaccgcg acggagatta tggcgtgctc gtaatggcca 1621 ctgacggcct ttgggatgta tccgaaaatg agggcgtttc acgcactgtc ttccagacgc 1681 tctccaagta tcctacggag aagcatcgct atacgatggt cgcccaggag ctggtggccc 1741 gggctcgcgg aaaaatcaac gactctgggc attggcgtct cgccgatagc aaggcagcag 1801 ccactgttga tgatatctcg gtgattgtga ttccggttag ccagtattac aaggaacatg 1861 tggaatggac gcagaactac aaacgggatc tcgagcatcg acggcgacag gcacaggcga 1921 acatggccca ggaggcagtc aatgtcctca atggcgtaat tgccgaggaa gctcacgtcg 1981 tcgaagagga ggaggagggc gaggtggttg tgcacgaggc aaggacttcc caaaagcaat 2041 cggagaagca acatcaggtg gaggaggcag tcgacgagaa cctggtggta catctgaccc 2101 cttcgctgga gcaggtgcag ctaaatgaca cggatttagc agcgtccgac atcggtaagg 2161 agaaggacac tgataaggac aaggacgtct cgacaactcg gcagcattcg caaccatcgc 2221 ttcaaaaggg tcgcaagggc aaaggcaagc actagaatat atgtcctgcc acacagaccg 2281 atgtattagg cttatattaa aaggataaag atgcgacagt tattgacaca tctatatatt 2341 tttacactcc acacacaaga acaaattcaa cacattcaaa gtttctacat aatttgctta 2401 tgtacaaacc aaaaaagcaa gtcaacttaa ttgcaatgta caattatttg ctgtaattaa 2461 gtgtatttat tttgatcgaa aacgattaat gaatgaacaa agccccagag taatgctgga 2521 caatttttca attaacacaa attaaaacct tatgattcca attgaaaaca tacaaaatca 2581 gaaattaaaa agtattttaa gctgtgtaaa acataaacag aacaataaag taaaataaat 2641 caacaattac tgttaaatag aaa