PREDICTED: Drosophila takahashii tRNA methyltransferase 10 homolog

LOCUS       XM_017143828            1239 bp    mRNA    linear   INV 09-DEC-2024
            A (LOC108058863), mRNA.
ACCESSION   XM_017143828
VERSION     XM_017143828.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017143828.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1239
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1239
                     /gene="LOC108058863"
                     /note="tRNA methyltransferase 10 homolog A; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:108058863"
     CDS             85..1080
                     /gene="LOC108058863"
                     /codon_start=1
                     /product="tRNA methyltransferase 10 homolog A"
                     /protein_id="XP_016999317.2"
                     /db_xref="GeneID:108058863"
                     /translation="MDTEEQVLEVAPPEVLSLSNCPGTTPGTPCSKNQLKKQRKLAEF
                     AELRKLRREREREKKKQKRREAKEQGLPVRIGPSRKELKKRQAAESGQPGLSVAIDLD
                     YDDLMQERDISKCVKQCLRIYTINRRSAQPGKLHFTGIRRNGHIHQSFKKNDGWENWH
                     VDYHFDRGHTEVFDTSQLVYLTCESDRVLDKLQPGCTYVIGGLVDHNHFKGLCHSRAT
                     EAGLVTARLPLSEHVDMKTRAVLSTYHVFELLIKVAAGQDWTSAILDTIPMRKGAKAK
                     ATNERKEQEIEVLGRRQDLEQGPVLEQREEKLEAEPKKPSAAAIEPETKCQPLDS"
     misc_feature    367..897
                     /gene="LOC108058863"
                     /note="SPOUT superfamily of SAM-dependent RNA
                     methyltransferases; Region: SPOUT_MTase; cl38912"
                     /db_xref="CDD:476814"
     misc_feature    order(625..633,682..693,757..765,805..807,811..813,
                     820..822)
                     /gene="LOC108058863"
                     /note="SAM binding site [chemical binding]; other site"
                     /db_xref="CDD:349952"
     polyA_site      1239
                     /gene="LOC108058863"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgctgaaaac actgtcaagt gaagccagct gtttgagatg aaatatcaga ggttttctga
       61 ttcaaattga actattaaat tactatggat acggaagaac aggtgctcga ggtggcgccc
      121 ccggaggtcc tcagcctaag taactgcccg ggcaccactc ccggcacgcc gtgcagcaaa
      181 aatcaactga agaagcagcg aaaactggcc gagtttgcgg agctccggaa gctgcgacgc
      241 gaacgggagc gtgagaagaa gaagcagaag cgtcgggagg ccaaggagca gggtctgccg
      301 gtccggattg ggccttcccg caaagagctc aagaaacgcc aggcagccga gagcgggcag
      361 cctggcctca gcgttgccat cgatctggac tacgacgatc tgatgcagga gcgggacatc
      421 tccaagtgcg tcaagcagtg cctgcgaatc tacaccatca atcggcgcag tgcgcagcca
      481 ggcaagctgc acttcacggg catccggcgc aacgggcaca tccatcagtc gttcaagaag
      541 aacgacggct gggagaactg gcacgtggat taccatttcg atcgcggaca caccgaggtc
      601 ttcgacacca gccaactggt ctacctaacc tgcgagtccg atcgggtgct ggacaagctg
      661 cagcccggct gcacctacgt catcggcggc ctggtggacc acaatcactt caagggcctg
      721 tgccactcga gggccacgga ggcgggcctg gtcaccgccc gcctgccgct cagtgagcac
      781 gtggacatga agacacgggc cgtgctcagt acctaccatg tcttcgagtt gctaattaag
      841 gtagctgctg gccaggactg gacctcggcc attctggaca cgattcccat gcgcaaggga
      901 gccaaagcga aagccactaa tgaaaggaag gagcaggaga tagaggttct agggcgacgc
      961 caggatctgg agcagggtcc agtactagag cagagggagg aaaaactgga agctgagcca
     1021 aagaagccat ccgcagccgc catcgaaccg gaaactaaat gccagccctt ggacagttga
     1081 caacagtcga gatcgcaatt cgaggtcttt ttgattttta tttcagtttc ttttgttttt
     1141 acaaaatcac atttagtttt gtttcgcaaa ttaaattaca acttaaaata catagcgcaa
     1201 attataataa aaatacaaaa aaaatttcgt tcacaggaa