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LOCUS XM_017143825 2421 bp mRNA linear INV 09-DEC-2024 (LOC108058861), transcript variant X1, mRNA. ACCESSION XM_017143825 VERSION XM_017143825.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017143825.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2421 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2421 /gene="LOC108058861" /note="uncharacterized LOC108058861; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108058861" CDS 455..1579 /gene="LOC108058861" /codon_start=1 /product="uncharacterized protein isoform X1" /protein_id="XP_016999314.2" /db_xref="GeneID:108058861" /translation="MFQALPRPSRSTLHCGAAAIVTVILMAWVRPLGVLFLGFLGYWI YWTRCSFRIVPTDELRGKINGWLQRIDDWRHSSPSMFCLASSGCLGTLAVLGHLFSGS TLVLAILVVSALVSTKYTFKLLKIEHKDFQWSEKLNYNNLEAEAEDEFLPDVNESNLF VLERASDVATISSPTDANDEKDDERSDDIPSELLIPDVIPEIDEQSTDEDDELAPLAA KKQHGENQQQQHEQLAEENEDMKFRKGHFKRDSSLSTTSSSSEESLSKGLQFPDHTSV DASGNTRLRQITAGPDPAGELMALAVKSQAQALLANSGKLLPSLVSGLVQWGSGGAAA ASSGDDATDASRDRKQQRMVTALDSSDESDFEILETDDFK" misc_feature <650..796 /gene="LOC108058861" /note="ADP-ribosylation factor-like protein 6-interacting protein 1, Reticulophagy regulator 3, and similar proteins; Region: Arl6IP1_RETR3-like; cl41772" /db_xref="CDD:425403" polyA_site 2421 /gene="LOC108058861" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tatcgacgtt ttcgcatctc taaaaggaat cggatgtgtt ttttatcatt gcgttgattg 61 ttgttgtggc gcgatcgaat ttgtttggaa gtcgggaaat cagctttatc atttgaaaag 121 tgttttgatt taggacaccg tcagctataa cgaaaacagc cgcggatttt aacaaagagc 181 acacaaagga aaggaataaa gaacggaagg ataagagcag agagtgcaaa tctgttactg 241 ttactcggcc catgcgcaca gctgatccag aacctggcct aacggtaaac cgattgtctc 301 ggacttgaaa agcggaaatc gaaagcgaaa cggaagtcgc ctggaaaagc ggagcggaaa 361 ataaaactgc ccgctaaccg cgggagccga gaaccgaaat tcaaagccac acaggctata 421 acaaagagaa taaagtagac caagcaaatt gaagatgttc caagccctgc cccgtccatc 481 aaggtccacg ctccactgtg gagcggcagc catcgtcaca gtcatcctca tggcctgggt 541 ccgaccactg ggcgtgctgt tcctgggatt cctgggctat tggatctact ggacacgctg 601 tagcttccgg attgtgccca cggacgaatt gcgcggcaag ataaacggct ggctgcagag 661 gattgacgac tggcgccaca gcagtcccag catgttctgc ttggccagca gcggctgctt 721 gggcaccctt gcggtgctcg gccacctctt ctccggctcc acgctggtcc tggccatcct 781 ggttgtctcg gcccttgtct ccaccaagta cacctttaag ctgctgaaga tcgagcacaa 841 ggacttccag tggtcggaga aactcaacta caacaacttg gaagccgagg cagaggacga 901 gtttctaccg gacgtgaacg aatcaaatct gttcgtgctg gagcgggcaa gcgatgtggc 961 cacgatcagt tcacccaccg atgcaaatga cgagaaggat gacgagcgca gcgacgatat 1021 accgtcggag ctgctgattc cggatgtgat acccgagatc gacgagcagt ctaccgacga 1081 agacgatgag ctggctccac tggcggccaa gaagcagcat ggcgaaaacc agcagcagca 1141 gcatgaacag ctagccgagg agaacgagga tatgaaattc aggaagggtc acttcaagcg 1201 cgattcgtcc ctgtccacca cgtcctcgtc ttcggaggaa agcctgtcca aggggctgca 1261 gttccccgat cacacctccg tagacgcgag tggcaacact cggttgcgcc agataaccgc 1321 aggacccgat cccgccggcg agcttatggc cctggccgtg aaatcccagg ctcaggcgct 1381 tttggccaac agcgggaagc tcctgcccag tcttgtctcc ggtctggtgc agtggggatc 1441 aggtggcgct gccgcagcca gttccggcga tgatgcgacc gatgcaagtc gggatcgcaa 1501 gcagcagcgc atggtcaccg ccttggattc ttcggatgag agtgactttg agatactcga 1561 aacggatgat ttcaagtaaa gattggatca aatcggagat cgttccgatt tgtcgtatta 1621 taaagctatt atcttaatat acatatgcat acacacacag tacacaaacc aatcgacaga 1681 cagaacaagg aaactcagac gacgcggact gttggaacgg ttatattttc cctggtggag 1741 atcagttata tattttgcta tacactagtg ctctatatac atatatacta aactaaacat 1801 acaaaactac cctaaaatta agccgaaagt tttcgttttc gtttgattgc tatgtacatt 1861 tttgtttata taaccttatg cttattccta ttttactatt tgactctagt ttgtattagt 1921 cttgttatgc ctatctactg atcacaaaca gaaacaagaa cgaccgacgc atgcaaaatg 1981 tacatatact acagatacac ttatctatat gtatggttta tattgatgtc gctgtgaggg 2041 cattaagcta cttaatctga atccaaatca aaagcctaaa gcagcaattt aaaaaccaaa 2101 aaatgacatt aagaaaacaa acatgaaata tggttcagag atatctataa aaaaattcgg 2161 cataaaacgt gcacaaatca taacaaaaca aaaattataa gaaattgaag acactcgttt 2221 tactggcgac ttttgtccct ggctatcatt gtacgttgaa gaacataact aaaacattaa 2281 ttcctgtgaa cgaaattttt tttgtatttt tattataatt tgcgctatgt attttaagtt 2341 gtaatttaat ttgcgaaaca aaactaaatg tgattttgta aaaacaaaag aaactgaaat 2401 aaaaatcaaa aagacctcga a