PREDICTED: Drosophila takahashii clusterin associated protein 1

LOCUS       XM_017143815            1710 bp    mRNA    linear   INV 09-DEC-2024
            (Cluap1), mRNA.
ACCESSION   XM_017143815
VERSION     XM_017143815.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017143815.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1710
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1710
                     /gene="Cluap1"
                     /note="clusterin associated protein 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:108058856"
     CDS             66..1631
                     /gene="Cluap1"
                     /codon_start=1
                     /product="clusterin-associated protein 1"
                     /protein_id="XP_016999304.1"
                     /db_xref="GeneID:108058856"
                     /translation="MSFKDVRDLGEHLKLLGFPRVFPLQSLANKHGSLASFHIVSELL
                     QWLAGLMEPGATLPGGVESEEQRILLVRSATEFFVTKAAIRLNPRKLYAAAAVTAAEL
                     QKVTRLLTAPGQNEGDRDEEDQRDQYRSLNPVDIGDKMDELRKARELAADLAQRGSTI
                     YELLSKELLNKEARMSQAQRPLELLSVERTLKNAIQASQVRLQSSRAQLEAGKVELNA
                     LGSKLQRRRAELERTRQRLEALHRIRPAHMAEFEDCEKELQQLFQRFFLRLHVRDALK
                     SQLELRTKRATPIASPVLQKPAESSIPFIPEGLIEDDDDDLDDEDEDEDGGEAVSGLD
                     MVVNGRSVFGLDSEIPDIRDEDKMMQQNSLTSAQGKRPGTATSRVRPTTGRSRKTVSL
                     TGRNAAGPEGGGDARASRGSRRGGATEGEAGGTHRNGRNGPGSSMLNSRDDDSSFGSS
                     ESELDVGEIMGMSGMSGISGISGLSHIALGAGDDDFDLNSIDDISISKLTGELPLRPK
                     TANKTEHHSDEDF"
     misc_feature    105..929
                     /gene="Cluap1"
                     /note="Clusterin-associated protein-1; Region: Cluap1;
                     pfam10234"
                     /db_xref="CDD:463013"
     polyA_site      1710
                     /gene="Cluap1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gtggaaaatg caattgccag cgcagccggc gcagcaaaaa caggtgaaca cgtcggaatc
       61 caggaatgtc cttcaaggat gtgcgagatc tgggggaaca cctcaagttg ttgggctttc
      121 cccgggtatt tcccctccaa tccctggcca ataagcatgg cagcctggcc agtttccaca
      181 tagtctccga gctcctgcaa tggctggctg gtctgatgga accgggtgcc actttgcccg
      241 gcggcgtgga atcagaggag cagcggattc tcctcgtccg ttcggcgacc gaattttttg
      301 ttaccaaggc ggccatacgc ctgaatcccc ggaaactgta tgcggccgca gcggttacgg
      361 cagcggaact gcagaaagtc acccgactac tgacggcccc aggacaaaac gaaggcgatc
      421 gcgacgagga ggaccaacgg gatcagtata gaagcctaaa tcccgtcgac attggggaca
      481 aaatggacga gttgcgtaaa gcccgagagc tggctgcaga tttagcccag cgaggctcca
      541 ccatatacga gctgctttca aaggagctgc tgaacaagga ggcccggatg tcccaggccc
      601 aaaggcccct ggaactgctc agtgtggaga ggactctgaa gaacgccatc caagccagtc
      661 aggtgcgcct gcagtcgagc agggcccaac tcgaggccgg aaaagtggaa ctaaatgcgc
      721 tgggctccaa gctgcagcgc cgccgtgcgg agctagagag aacgcgccaa agattggagg
      781 ctctgcatcg cattcgaccg gcccacatgg ccgagttcga ggactgtgag aaggaactgc
      841 agcagctttt ccagcgcttc ttcctaaggt tgcatgtccg cgatgctctg aagtcccaac
      901 tggagttgcg taccaaacgt gccacgccca ttgcctcgcc cgttctgcaa aagcccgccg
      961 agagctccat acccttcatc ccggagggcc tcattgaaga cgatgacgat gatctagacg
     1021 acgaggatga ggacgaggat ggcggcgaag cggtttccgg ccttgacatg gtggtaaatg
     1081 gcaggagtgt cttcggcctc gactcggaga tacccgatat tcgggacgag gacaagatga
     1141 tgcagcagaa cagcctcact tcggcacagg gaaagcgtcc tggcacagcc acctccagag
     1201 tacggcccac aacgggaaga agcagaaaga cagtctctct cacaggaaga aacgccgcag
     1261 gaccagaagg aggtggtgat gccagagcat cccgaggatc cagaagaggt ggagcgactg
     1321 aaggagaagc aggtggcacc catcgaaatg gccgtaatgg acccggaagt agtatgctca
     1381 attcacgaga tgatgacagc agcttcggga gctccgaaag tgaacttgat gtgggcgaga
     1441 tcatgggcat gagtgggatg agcggcatta gtggaataag tggattgagc catattgctt
     1501 tgggagccgg tgatgacgat tttgatctca actcgataga tgacattagc atttcaaagt
     1561 taactggaga actgccgttg cgacctaaga cggccaataa aacagagcac cacagcgatg
     1621 aggatttcta ggttaactaa tcattttcta cagattttat aaacgctgca acagggtgtc
     1681 actaataaat acaatattct caacctgtaa