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LOCUS XM_017143185 3507 bp mRNA linear INV 09-DEC-2024 repeat containing 2 (Lrpprc2), mRNA. ACCESSION XM_017143185 VERSION XM_017143185.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017143185.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3507 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3507 /gene="Lrpprc2" /note="Leucine-rich pentatricopeptide repeat containing 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108058450" CDS 128..3355 /gene="Lrpprc2" /codon_start=1 /product="leucine-rich PPR motif-containing protein, mitochondrial" /protein_id="XP_016998674.2" /db_xref="GeneID:108058450" /translation="MQRARLLQSAWRSVAQQLPGRRASSVSLGLRYAMPPAGGLPPLH PRRFLATSGILAAADKRNRRSSASERPELNLEDVWTQLESYYQQHGLLNYEHCQRLLE QLQRTQGSGSAAVTLEQLHFLLGSCVPELLPAQGAQERLQLFEGLWRQLLKGSVPTLP HYHTRLQVLRQNRLPLADHRSLLAEIAVYHGSSADVEAPLYSDLLDVAGSSGNMRMAT ELLAEMRQRSFPLTERNFHALLLGHARNGDLPGAESVLASMRAAGIQDKGGATQALWF EALVASGQLQQAKELLAEEQGFTAPQLLQMLRGVLLTGRNTEETTELAQLVVKELPRE FLSGLDLPPAIRSLCIQLVHQGRSQVVIQLVAALPAPQFNLQNQSNNQNVDEYGALLL QEFFRAHVPLEETLQFARQLVQRQQNGRALHLVTELALRRLPSAALQCLEALAASEEL RPHYFWPLILHQQRREGESGMLRVLAEMQRLRVECDEETVRQYLLPHLQQTLQQPLEA VKALEAAGVKPSLTLGPTVSHLLQQQHQMAEVLELLKRYPTRLELGTLLQPLTSLAVN ARATKRYELFAKVIQALQQKALQRTEDFVGSLLLQMMGPQTRLRQDAASLSRFLHELR RLELQISPAAAEALLSLARQATEDLDLVQDIAKTLQKMRHNQLTLPADAAGGGGFIKH PRDMSLDELECHLVELEAKQLNPRGVLRRLLQLSVRSGRLERAQQLLSKCQALKVQTS AGMMASILDLHIKLRDLPKAQQSLEQLSSSYPAFQIDEHKVIDFAALLVHGQQLEAAK QLLQRRAEQHKVVGGDYVIKNVWQLLTNVAQLAAQATEKPSTNLTREMLEFLRNLGYC QSHNALLGPVVREWLLKGDLEAAVAEFQRLASQHKHTPLQFELLSLLVRLGNGDEREL ARFPGTTAEAAQQQLAAVTATVSRIHGAANMNSALLLALAESGKETQLRRLIINPEFR INHELLVKNCEHLGQEGAVRTLLRLARGVRGVQRTIDEQKIYDLLLAQFCRSNDYEAA LDLFERLEADDELKVSQEFLRNLVQLLQLNRVEIPSGIALRAQIR" misc_feature 608..697 /gene="Lrpprc2" /note="PPR repeat [structural motif]; Region: PPR repeat" /db_xref="CDD:276811" misc_feature 728..808 /gene="Lrpprc2" /note="PPR repeat [structural motif]; Region: PPR repeat" /db_xref="CDD:276811" misc_feature 824..913 /gene="Lrpprc2" /note="PPR repeat [structural motif]; Region: PPR repeat" /db_xref="CDD:276811" misc_feature 926..1009 /gene="Lrpprc2" /note="PPR repeat [structural motif]; Region: PPR repeat" /db_xref="CDD:276811" polyA_site 3507 /gene="Lrpprc2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccgataactt tcaaccggaa cgcacagctg attgccggcg cgtgttgttt tcttttatcg 61 aacttaattc aacttgattt attttaagtt tagtgcgtga aattgaaact gaatgaagta 121 ggccgaaatg cagcgagcta gactgttgca gagtgcgtgg cggtcagtgg cgcagcagct 181 gccgggacgc cgtgcctcct ccgtcagcct gggactgcgt tatgcaatgc cgccggctgg 241 cggtcttccg ccactgcatc ctcggcgctt tctggccacc agtgggatcc tcgcagcggc 301 ggacaagagg aaccggcgat cctccgcctc cgagagacca gaactcaacc tggaggacgt 361 gtggacgcag ctggagtctt actaccagca gcacggcctg cttaactacg agcactgcca 421 gcggctcctg gagcaactgc agcgcacgca gggatcggga tcagcagccg taacccttga 481 gcagctgcac ttcctcctcg gctcctgtgt gcccgaactg ctgcccgccc agggcgccca 541 ggagcgcctc cagctcttcg agggcctctg gcggcagctg ctcaagggat ccgttcccac 601 gctgccccac taccacaccc ggctgcaggt gctgcgccag aaccgcctgc ccctcgccga 661 tcatcgttcg ctgctggcgg agattgccgt ctaccacgga tcctctgcgg atgtggaggc 721 cccgctgtac agtgacctcc tggatgtggc tggatcatcg ggcaacatgc gcatggccac 781 cgagctgctg gccgagatgc ggcagcgcag ctttccgctc acggagcgca actttcacgc 841 cttgctactg ggacacgcgc gcaatggaga tctccctggg gcagagtccg ttttggccag 901 catgcgggcg gctggcatcc aggataaggg tggcgccacc caggccctgt ggttcgaggc 961 gctcgtggcg agcggccagc tgcagcaggc caaggagctg ctggcggagg agcagggatt 1021 tactgcccca cagctgctgc aaatgctgcg cggagtgctg ctcacgggaa gaaacaccga 1081 ggagaccact gagctcgccc aactggtggt caaggagctg ccgcgtgagt ttctctcggg 1141 cttggacctg ccacccgcca tccggagcct gtgcatccag ctggtgcacc agggacgcag 1201 ccaggtggtc atccagctgg tggccgccct gccggcgccc cagtttaacc tccagaatca 1261 aagcaacaac cagaatgtcg acgagtacgg ggctctgctg ctgcaggagt tcttccgcgc 1321 ccatgtgccc ctcgaggaga cgctgcagtt cgcccggcag ctggtgcagc gccagcagaa 1381 cggtcgcgcc ctgcatttag tcaccgaatt ggccctgcgc cgactgccct ccgcggcgct 1441 gcagtgcctg gaggcgttgg ccgccagcga ggagctgcgg ccgcactact tttggcccct 1501 gatcctccac cagcagcggc gggagggcga gagcggcatg ctgcgagtgc tcgccgagat 1561 gcagcgactg cgcgtggagt gcgacgagga gacagtgcgt caatacctgc tgccgcatct 1621 ccagcagacg ctgcagcagc ccctggaggc ggtgaaggcc ttggaggcgg ccggagtgaa 1681 gccatcgctg accttgggac ccacagtgag ccacctgctg cagcagcagc atcagatggc 1741 ggaggtttta gagctcctca agcgctaccc cactcgttta gagctgggaa cgctgctcca 1801 accgctcacc tctttagccg taaatgcgcg tgccaccaag cggtacgaac tcttcgccaa 1861 ggtgatccag gcgctgcaac agaaggcgct gcagcgaacg gaggactttg tgggctcgct 1921 gctgctgcag atgatgggtc cacagacgcg tctccgccaa gatgccgcct ctctcagccg 1981 cttcctgcac gaactgcggc gtttggagct gcagatctct ccagcagccg ctgaagctct 2041 cctctccctt gcccgccagg ccaccgagga cttggatttg gtgcaagaca tagccaagac 2101 gctgcagaag atgcgccaca accagctgac gctgcccgcg gatgcagccg gcggcggagg 2161 cttcatcaag catccgcgcg acatgagcct ggatgagctg gagtgccacc tcgtggagct 2221 ggaggccaag cagctgaatc cgcgcggcgt gctgcgccgc ctgctgcagc tctcggtgcg 2281 cagtggtcgc ctggaaaggg cccagcagtt actcagcaag tgccaggccc tcaaggtgca 2341 gacgagcgcc gggatgatgg cctccattct ggacctgcac atcaagctgc gcgatttgcc 2401 gaaggcacag cagagcttgg agcagctgag cagcagctat ccagcctttc agatcgacga 2461 gcacaaggtg atcgactttg ccgccctctt ggttcatggc cagcagctgg aggccgccaa 2521 gcagctgctc cagcgacgcg ccgagcagca caaggtcgtc ggcggcgact atgtgatcaa 2581 gaacgtgtgg cagctgctga ccaatgtggc gcagttagcc gcccaggcta cagagaagcc 2641 atcgactaat ctcacccgcg agatgctcga attcctgcgg aatctgggct actgccagtc 2701 gcacaatgct ctcctgggac ccgtggtgcg cgagtggctg cttaaaggcg acctagaggc 2761 cgctgtggcc gagttccagc ggctggccag ccagcacaag cacacgccgc tgcagttcga 2821 gctgctgtcg ctgctggtgc gcctgggcaa cggggatgag cgggagctgg cccgctttcc 2881 gggcaccacg gcggaggcgg cgcagcagca gctggctgcg gtgacggcga cggtgagccg 2941 cattcatggg gcggccaaca tgaacagcgc tttgctgttg gccctcgcgg aatccggaaa 3001 ggagacgcag ctgcggcggc tgatcatcaa ccctgagttc cggatcaatc acgagctgct 3061 ggtgaagaac tgcgagcatt tgggacagga gggagccgtg aggacgctcc tccgactggc 3121 aagaggcgtc agaggagtcc agaggaccat tgacgagcag aagatctacg atctactgct 3181 ggcacagttc tgccgcagca acgactacga ggcggcgctg gatctgttcg agcgcctgga 3241 ggccgacgac gagctgaagg tgtcgcagga gttcctgcgc aacctggtgc agctgctcca 3301 gttgaaccgc gtcgagattc ccagcggcat cgccctgcgc gcccagatta gatagtgcct 3361 atgctagttg taaataaatc gaacgattta atgtgtaatg tctcggttca gagtgtctac 3421 ttggctctaa aatgttaaaa actattcatt tatttattag agtatcaatt ttgacacaat 3481 aattatagaa taattatgaa attgcaa