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LOCUS XM_017143178 1728 bp mRNA linear INV 09-DEC-2024 mRNA. ACCESSION XM_017143178 VERSION XM_017143178.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017143178.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1728 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1728 /gene="O-fut2" /note="O-fucosyltransferase 2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 6 Proteins" /db_xref="GeneID:108058444" CDS 33..1556 /gene="O-fut2" /codon_start=1 /product="GDP-fucose protein O-fucosyltransferase 2" /protein_id="XP_016998667.2" /db_xref="GeneID:108058444" /translation="MRGNWEPGIGLLLFLFLFLLCHLQVTFSTETTLRNGTTASWRSG AARRSAKATCSQRFLPEILPPPATCPPEILSLGGTVYILYDVNISEGFNLRRDVYIRL AVFVRRLQKLQRNRRRFRNVRLVLPPWPRLYHWHSQGLQQDDGLPWSHFFDLDSLRRY APVLDYEEYLAEQRLFGQPGAPLIHVAHAFRLQHYEVMLEQGHFRDKFERIADQPCSE SARSGGPLLLHRRELRVGRFHCVRFQGSAGLLEQLLLQAIDEDTAGEEDAQDMRSFVL LSAETVLHDHWGDEHFWRARRSMRFARRLQQVADDFRRQVLATTASSAGVQRPVMWEL ERGKRNARGGDYLCAHLRRGDFVRSREATTPTLKAAAQQVKQLLRAYNMTTVFLASDA TPYELMELKELFQRSFRFVHFAPESNGQRRELKDGGVAVVDQLVCAYARYFVGTYEST FTYRIYEEREILGFSQASTFNTFCKALGGSCSRNAVWPIVWDAQGDGDGDESEEDPY" misc_feature 273..1457 /gene="O-fut2" /note="GDP-fucose protein O-fucosyltransferase 2; Region: O-FucT-2; cd11298" /db_xref="CDD:211384" misc_feature order(303..314,1080..1082,1086..1088,1197..1205, 1320..1322,1377..1385) /gene="O-fut2" /note="GDP-Fucose binding site [chemical binding]; other site" /db_xref="CDD:211384" polyA_site 1728 /gene="O-fut2" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaaatacca caactagcca aaacgaccaa aaatgcgagg gaactgggag cccggaattg 61 ggctactcct gttcctattc ctgttcctgc tctgccacct ccaagtaacc ttctccacgg 121 agaccaccct acggaacggc acaaccgcca gttggaggag cggcgctgcc cggagaagcg 181 caaaagccac ctgttctcaa agattcctgc cggagattct tcccccgcca gctacctgcc 241 cgccagagat cctcagccta gggggcaccg tgtacatcct ctacgacgtc aacatctccg 301 agggcttcaa cctgcgtcgc gatgtctaca ttcgcctggc ggtcttcgtg cggcggctcc 361 aaaagcttca aaggaatcgc cggcgcttcc gcaatgtgcg cctggtgctg ccgccctggc 421 cacgcctcta ccactggcac tcgcaggggc tgcagcagga cgacggcctg ccctggagcc 481 acttcttcga cctggacagc ctgcggcgct acgcaccggt gctggattac gaggagtacc 541 tagcagagca gcggctcttc ggtcagcctg gcgccccttt gatccatgtg gcgcacgcct 601 tccgcctgca gcactacgag gtgatgctgg agcagggcca cttccgggac aagttcgagc 661 gcatcgcgga ccagccgtgc agcgagtcag cccgctcggg tggccccctc ttgctgcatc 721 gtcgggagct gcgcgtcggt cgcttccact gcgtccgctt ccagggcagc gccgggctgc 781 tggagcagct gctcctccag gccatcgacg aggatacggc gggggaggag gacgcccagg 841 acatgcgctc ctttgtcctg ctgagcgcgg aaactgtgct ccacgatcac tggggcgatg 901 agcacttttg gcgcgccaga cgctccatgc gcttcgcccg gcgcctccag caggtggccg 961 atgacttccg ccggcaggtg ctggccacca ctgcctcctc ggctggagtc cagcggcccg 1021 tcatgtggga actggagcgt ggaaagcgga atgccagggg cggtgattac ctgtgcgccc 1081 atctgaggcg gggcgacttt gtgcgctcgc gggaggccac cacgcccacg ctgaaggcag 1141 ccgcccagca ggtgaagcag ctgctgcggg cgtacaacat gaccactgtg ttcctggcca 1201 gcgatgccac gccctacgaa ctgatggagc tgaaggagct cttccaacga agcttccgct 1261 tcgtgcactt tgcccccgag tcgaacggac agcgccgcga gctaaaggat ggcggcgtgg 1321 cggtggtgga ccagctggtg tgcgcctatg cccgctactt tgtgggcacc tacgagagca 1381 ccttcacgta ccgcatctac gaggagcgcg agatcctggg ttttagccag gccagcacgt 1441 ttaatacgtt ctgtaaggcc ctcggaggca gctgctcccg caacgccgtc tggccaatag 1501 tgtgggatgc gcagggtgat ggtgatggcg acgaaagcga ggaggatccg tactgaactg 1561 aaaccgaaaa cgaaaacgaa accgaaacca ctgtgttccc ggttaaggaa actactcgaa 1621 tcctagggtt aagtgctaag gaaattccga acaatctgcg attgtgtacc aaaaaataaa 1681 ccaatagcat atagtttaca accttctagt aggtaaatat tttgaaaa