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LOCUS XM_017143177 2034 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017143177 VERSION XM_017143177.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017143177.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2034 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2034 /gene="Ns3" /note="nucleostemin 3; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108058443" CDS 109..1935 /gene="Ns3" /codon_start=1 /product="large subunit GTPase 1 homolog" /protein_id="XP_016998666.2" /db_xref="GeneID:108058443" /translation="MGKKNKGAAANLGRQLIKDRFGHTPRRKVDNDTMLHTTELQDGY DWGRLNLSSVTEESSFQAFLRTAELAGTEFQAEKLNITFVNPKQRVGLLSKTQEQRMH QKHVEHRDQLKIPRRPKWNKETSAEELERAENEAFLDWRRDLALLQEDEEILMTPYEK NLEFWRQLWRVVERSDVVVQIVDARNPLLFRSLDLESYVKEVEPTKMNMILVNKSDLL TEEQRRHWAEYFDAEGIRTAFYSATLVEEELKREAEAARQEEFPAVQQLRQAAEEIHQ SLDKVEDTLSAIEQKIKAEIKEEEKDQLPQLPGDKNSPRLLSRLELIEFLRHIYTGPR HTEQHVTIGMVGYPNVGKSSTINSLMTVKKVSVSATPGKTKRFQTLFLDKDILLCDCP GLVMPSFVLTKADMLLNGILPIDQMRDHVPAVNLLCERIPRHVLEDKYGIVIAKPLEG EDMERPPHSEELLLAYGYNRGFMTSNGQPDQARSARYVLKDYVNGRLLYAMGPPSLPQ QEYHTFPERQRKVIEESQLPSQQQRAMRIDKINTKELDNQFFSDKPTHAHVKGRTNFP NVRLANDGSLVAGNDPAAKPWRHVKKERREKLRKKFSHLDEH" misc_feature 598..1299 /gene="Ns3" /note="A circularly permuted subfamily of the Ras GTPases; Region: HSR1_MMR1; cd01857" /db_xref="CDD:206750" misc_feature 634..1599 /gene="Ns3" /note="Ribosome biogenesis GTPase RbgA [Translation, ribosomal structure and biogenesis]; Region: RbgA; COG1161" /db_xref="CDD:440775" misc_feature order(745..750,754..759,829..837,1150..1170,1285..1287) /gene="Ns3" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206750" misc_feature 745..756 /gene="Ns3" /note="G4 box; other site" /db_xref="CDD:206750" misc_feature 829..837 /gene="Ns3" /note="G5 box; other site" /db_xref="CDD:206750" misc_feature 1144..1167 /gene="Ns3" /note="G1 box; other site" /db_xref="CDD:206750" misc_feature 1219..1242 /gene="Ns3" /note="Switch I region; other site" /db_xref="CDD:206750" misc_feature 1228..1230 /gene="Ns3" /note="G2 box; other site" /db_xref="CDD:206750" misc_feature 1276..1287 /gene="Ns3" /note="G3 box; other site" /db_xref="CDD:206750" misc_feature 1282..1290 /gene="Ns3" /note="Switch II region; other site" /db_xref="CDD:206750" polyA_site 2034 /gene="Ns3" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atcgaagtgc tgccacctct aaccccaact gcacgtgttt ttgttgagaa ttgagtataa 61 ataaaattag tgcgtcccct gaacacctgg aaattaatta actgcgccat gggcaagaag 121 aacaaaggcg ccgcggccaa cctgggccgc cagttgatca aggatcgctt tggccacacg 181 ccgcgccgca aggtggacaa cgatacgatg ctgcacacca ccgagctgca ggatggctac 241 gactggggcc gcctcaacct gtcctcggtg accgaggagt cctccttcca ggccttcctg 301 cgcaccgccg aactggcggg caccgaattt caggccgaga agctgaacat cacgttcgtc 361 aacccgaaac agcgggtggg tctgctcagc aagacgcagg agcagcggat gcaccagaag 421 cacgtcgagc accgcgacca gctgaagatc ccgcggcgtc ccaagtggaa caaggagacg 481 agcgccgagg agctggagcg ggcggagaac gaggccttcc tcgactggcg tcgcgacctg 541 gcgctgctgc aggaggacga ggagatcctg atgacgccgt acgagaagaa cctcgagttc 601 tggcgccaac tgtggcgtgt cgtcgagcgt tccgacgttg tcgttcagat cgtggatgcc 661 cgcaatccgc tgctctttcg cagcctcgat ctcgagagct atgtgaagga ggtggagccg 721 acgaagatga acatgatcct ggtcaacaag tcggatctgc tgaccgagga gcagcgacgc 781 cactgggcgg agtacttcga tgccgagggc attcgcacgg ccttctactc ggccaccttg 841 gtggaggagg agctgaagcg cgaggcggag gcggcgcgcc aggaggagtt ccccgcggtg 901 cagcagctgc ggcaggcggc cgaggagatt caccagtcgc tggacaaggt ggaggacacg 961 ctgagcgcca tcgagcagaa gatcaaggcg gagataaagg aggaggagaa ggatcagctg 1021 ccccaactgc cgggcgacaa gaacagcccg cgtttgctgt cgcgcctgga gctcatcgag 1081 ttcctgcggc acatctacac cggtccgcgg cacacggagc agcacgtgac catcggcatg 1141 gtcggctatc ccaatgtggg caagagcagc accatcaact cgctgatgac cgtaaagaag 1201 gtgtccgttt cggccacgcc cggcaagacc aaacgttttc agactctctt cctggacaag 1261 gacatcctgc tgtgcgactg ccccggcctg gtgatgccca gcttcgtact gaccaaggcg 1321 gacatgctgc tcaacggcat cctgcccatc gaccagatgc gcgaccatgt gcccgccgtc 1381 aacctgctct gcgagcgcat tccgcgccac gtcctcgagg acaagtacgg catcgtgata 1441 gccaagccgc tggagggcga ggacatggag cgaccgccgc actccgagga gctgctgctg 1501 gcctacggct acaatcgtgg cttcatgacc tccaatggac agccggatca ggcgcgttcg 1561 gccagatatg tgctgaaaga ctacgtcaat ggccggctgc tgtacgccat gggtccgccc 1621 tcgctgcccc agcaggagta ccacacgttt cctgaacgcc agcgcaaggt gatcgaggaa 1681 tcgcagctgc ccagccagca gcagagagcc atgaggattg acaagatcaa caccaaggag 1741 ctggacaatc agttcttctc ggacaagccc acccatgctc atgtcaaggg acgcaccaac 1801 ttcccgaatg tgaggttagc caacgatggc tctttagtag ccggcaacga tccggcggcc 1861 aagccctggc gtcacgtgaa gaaggagagg cgcgagaagc tgcgcaagaa gttctctcac 1921 ctggacgagc actgattgct gcagtccacc ccgtaattta ttccccctcc gcgaggcact 1981 tgtatattat tagctttagg cttacgtgta gctattaaag ttccctgaac ctga