PREDICTED: Drosophila takahashii beta Hydroxy acid dehydrogenase 1

LOCUS       XM_017143175            1170 bp    mRNA    linear   INV 09-DEC-2024
            (Had1), mRNA.
ACCESSION   XM_017143175
VERSION     XM_017143175.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017143175.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1170
                     /gene="Had1"
                     /note="beta Hydroxy acid dehydrogenase 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 Proteins"
                     /db_xref="GeneID:108058440"
     CDS             117..1067
                     /gene="Had1"
                     /codon_start=1
                     /product="lambda-crystallin homolog"
                     /protein_id="XP_016998664.1"
                     /db_xref="GeneID:108058440"
                     /translation="MSQLKNEKVGIVGSGLIGRSWSMLFASVGYQVVLYDILPEQVST
                     ALTATQKELLDLEAKGLLRGKLTAAQQFSCISGTNDIKELVKGAIFVQECIPERLDLK
                     KALYKQLDAVVGPNTILSSSTSTFLPSLFSADLKNKANVLVSHPVNPPYYVPLVEIVP
                     APWTKPEWVTKTRAIMEEIGQKPVTLSREIEGFALNRIQYAILNETWRLVEAGILNVK
                     DIDSVMSNGLGPRYAFLGPLETAHLNAEGMANYFERYSKTIYAVSETMGPTPKMEGPV
                     AVEVAKQLGEMVPLDQLAARRNYRDNCLTQLSILKSKLNK"
     misc_feature    138..1052
                     /gene="Had1"
                     /note="3-hydroxyacyl-CoA dehydrogenase; Validated; Region:
                     PRK06129"
                     /db_xref="CDD:235706"
     polyA_site      1170
                     /gene="Had1"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ccggttgcgc tgccgtctaa ttgctcaaac gcatgtacgc tgtgccaagt ggcggtcgac
       61 agctcctcta taactctaaa acttcaaacg gtaactcctt gagtaaataa acagagatgt
      121 cgcagttgaa gaacgagaaa gtgggcattg tgggcagcgg tctcattggt cgctcctggt
      181 ccatgctctt cgcctcggtg ggctaccagg tggtgctgta cgacatcctg cccgagcagg
      241 tgtccaccgc tctgacggcc acccagaagg agctgctcga tctggaggcc aagggtctgc
      301 tgcgtggcaa gctgaccgcc gcccagcagt tctcctgcat ctcgggcacc aacgacatca
      361 aggagctggt caagggcgcc atcttcgtgc aggagtgcat ccccgagcgt ctggatctga
      421 agaaagccct ctacaagcag ctggacgccg tcgtcggacc caacaccatc ctctccagct
      481 cgaccagcac ctttctgccc tcgctcttca gcgcggatct gaaaaacaag gccaatgttt
      541 tggtctcgca tcccgtcaac ccgccgtact acgtgccgct ggtcgagatc gttccggcgc
      601 cgtggacaaa accggaatgg gtgacgaaga cccgtgccat catggaggag attggccaaa
      661 aaccggttac gctgtcgcgg gagatcgagg gcttcgccct gaaccgcatc cagtatgcca
      721 ttctgaacga aacatggcgc ctcgtggagg cgggcatcct gaatgtgaag gacatcgaca
      781 gcgtgatgag caatggcctc ggaccgcgct acgccttctt gggtcccctg gagaccgccc
      841 atctgaatgc cgagggcatg gccaactact ttgagcgcta ctcgaagacc atctacgcgg
      901 tgagcgagac catgggaccg acaccgaaga tggagggtcc cgtcgccgtc gaggtggcca
      961 agcagctggg cgagatggtg ccgctggatc agctggccgc acgccgcaat taccgcgaca
     1021 actgcctcac ccagttgagc attctcaaga gcaagctcaa caagtagagc agctcacttc
     1081 cttctgtttt atccattttt ttttgtttgt gatatgctaa gcgccacatg tgtacgttaa
     1141 atatacggaa attgtttaaa agatcatcta