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LOCUS XM_017143165 2157 bp mRNA linear INV 09-DEC-2024 (MTPAP), mRNA. ACCESSION XM_017143165 VERSION XM_017143165.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017143165.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2157 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2157 /gene="MTPAP" /note="mitochondrial poly(A) polymerase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108058431" CDS 120..1907 /gene="MTPAP" /codon_start=1 /product="poly(A) RNA polymerase, mitochondrial" /protein_id="XP_016998654.2" /db_xref="GeneID:108058431" /translation="MNSLVRRSAHQLSRWRTLCTKPGAPEAAASPGKPSYEEFIGHQQ WQARCSIVVQVSSEKSYPELYNYCSRFGEIRGAQHYCVRQDEALHYVLLEYATPDEAA AAIGAGVTNGELTSGVPVRSPFLWFRAAGGGRKSAKLAPNQVPQLLSIDGNRQVEQGH LLELLRSAQGIEEQVQLLHEHTRLNELGIRMRFLAALQVEQAIAGMFPAAQAQPFGSS VNGFGRMGCDLDLILRFDNDMGGRNPAEATAEPSRLVYHTKENLSNGRSQTQRHMECF GDMLHLFLPGVCHVRRILQARVPIIKYHHEHLDLEVDLSMSNLTGFYMSELLYMFGEM DARVRPLTFSIRRWAQSCGLTNPSPGRWISNFSLTCLVMFFLQQLRQPILPTIGALAK AAQPKDSRLTEDGINCTFARDVERVGFRSRNQSSLSELLLQFFEFYSQFDFHNRAISL NEGRPLSKPDHSAMYIVNPLEQLLNVSKNVSLEECERLRIEVRNAAWILESEVENVDR QELSWGLLNLFKHPEKAVIRPNMFFKPRMVEVSDLFEEKQTKEASNSSSAITYKSSSV RQQVQSIKAATRSELKQLQNSPKNRRSSR" misc_feature 690..1115 /gene="MTPAP" /note="Nucleotidyltransferase (NT) domain of poly(A) polymerases and terminal uridylyl transferases; Region: NT_PAP_TUTase; cd05402" /db_xref="CDD:143392" misc_feature order(762..770,798..803,807..809,1008..1013,1017..1019, 1023..1025,1056..1058,1077..1082,1089..1094) /gene="MTPAP" /note="active site" /db_xref="CDD:143392" misc_feature order(762..764,1008..1010,1017..1019,1023..1025, 1056..1058,1077..1082) /gene="MTPAP" /note="putative primer-binding pocket [active]" /db_xref="CDD:143392" misc_feature order(801..803,807..809,1056..1058) /gene="MTPAP" /note="metal binding triad [ion binding]; metal-binding site" /db_xref="CDD:143392" misc_feature 1395..>1499 /gene="MTPAP" /note="Cid1 family poly A polymerase; Region: PAP_assoc; pfam03828" /db_xref="CDD:427532" polyA_site 2157 /gene="MTPAP" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tcgataaccg ataacataac ctcaaagcca gagcgccacc aaaataaagt tacatttttt 61 gggaattgca agtcgtccag gacttgacca gcccaccaga tacagccaca ccacccgcca 121 tgaacagcct tgtacgccgc agtgcccacc agctgagccg gtggcgcaca ttgtgcacaa 181 aacccggcgc cccggaggca gcggcgtctc caggtaaacc cagctatgag gagttcatag 241 gccatcagca gtggcaggct cgctgcagca ttgtcgtcca ggtgagctcc gagaagtcgt 301 acccggagtt gtataactac tgcagccgct tcggcgagat tcgcggtgcc cagcactact 361 gcgtccgcca ggacgaggcc ctgcactatg tgctcctgga gtacgccacc ccggatgagg 421 cggcggcggc cattggagcg ggcgtgacca atggcgagct cacgagcggc gttcccgtgc 481 gttcgccctt cctttggttt cgtgccgccg gcggaggaag aaagagtgcc aagctagctc 541 ccaatcaagt gccacaactc ctctccatcg atggcaatcg gcaggtggag cagggccacc 601 tactggagct actccgctcg gcccagggaa tcgaagagca agtgcagctg ctgcatgaac 661 atacgcgcct gaatgaactg ggcattcgga tgaggtttct ggccgccctg caagtggagc 721 aggccatcgc cgggatgttt cccgccgccc aggcgcagcc ctttggctcc tccgtcaacg 781 gcttcggacg aatgggctgc gatctggatc taatcctccg cttcgacaac gatatgggcg 841 ggagaaaccc agcggaggca acggcggagc catcgcgcct ggtttaccac accaaggaga 901 acctgagcaa cggccgatcg cagacgcagc ggcacatgga atgcttcggc gatatgctgc 961 acctcttcct gcccggcgtc tgccatgtgc gacgcatcct gcaggccagg gtgcccatca 1021 tcaagtacca ccacgagcat ctggacctcg aagtggacct gtccatgagc aacctcactg 1081 gcttctatat gtccgagctg ctctacatgt tcggcgaaat ggatgctcgc gtgcgtccgc 1141 tgaccttcag cattcgccgc tgggcgcagt cgtgcgggtt aacgaatccc tcgcccggtc 1201 gctggatcag caacttctcg ctgacctgcc tggtgatgtt cttcctgcag cagcttcgcc 1261 agcccatcct gcccaccatt ggagcgctgg cgaaggcggc ccagccgaag gattcgcggc 1321 tcaccgagga cgggatcaac tgcacatttg cccgggatgt ggaacgcgtg ggctttcgga 1381 gtcgcaatca gagctcgctg agtgaactgc tgctgcagtt ctttgagttc tactcgcagt 1441 ttgacttcca caatcgagcg atctctctaa atgagggtag gccgctttcc aaaccggatc 1501 actcggccat gtacattgtg aatccgctgg agcagctgct caatgtcagc aagaatgtga 1561 gcctggagga atgcgagcgg ctgcgcatcg aagtgcggaa tgcggcttgg attctggagt 1621 cggaggtgga gaatgtcgat cggcaggagc tctcctgggg tctcctcaat ctgtttaagc 1681 accccgagaa ggccgtaatc cggccgaata tgttcttcaa gccgcgcatg gtcgaggtca 1741 gcgatctctt cgaggagaag cagacgaagg aggcttctaa ctccagcagt gccatcacct 1801 acaagagctc ctcggtgcga cagcaggtgc agagcatcaa ggcggccaca cgctcggaac 1861 taaagcagct acagaacagt cccaagaacc gaaggagcag cagatgatga tgagatgcta 1921 ctatctcgac tgcctatgta catacttagg tttaagtaac ctatcctatg ggtcaagctt 1981 aaggttaggg caaaactaaa tgttgttcat actgttaagt ctagtttcca cacaatgttg 2041 agtatttaaa atgacgaacg agaacaaaat tattagaagc taaccctaag atatatttcc 2101 ctagttaaaa tactgttttt tatataataa ttaaaccaaa aaataatatt tgttgaa