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LOCUS XM_017143147 2076 bp mRNA linear INV 09-DEC-2024 (LOC108058420), mRNA. ACCESSION XM_017143147 VERSION XM_017143147.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017143147.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2076 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2076 /gene="LOC108058420" /note="uncharacterized LOC108058420; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108058420" CDS 116..2008 /gene="LOC108058420" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_016998636.2" /db_xref="GeneID:108058420" /translation="MAAKRTRDADIVKHKMDLRVRFKKLVRAVIMNQTWLSDEEEQGI SMNVKKNVALMRQKRKPGMLTVADKALLRSNPAFRTIEERKKLCMLIAGLNCFSRIPP KIRSRMVPVLKFMSINESRLIIKDGDMPISVYFILNGEVEMKKTIYNKATKQEDAVPE AIFGPGDCFGDVEMVEDCPRMNTYIALSSCEVLSLYDQDYERILKPFMLKQWNEKKLA LKAFDYFDFLSPEQIILACKYSYLVQYEPLETIYLGDKGSLGYVRFILSGECVILQCL SMKVTNADGKVNYELTEIDKDKEGLDMFQSWKDLRSQAQIVDIQDILASTSSSSDDVE GGVTKKKQAMRKMGLAEIEKFCGIRDSATPKGKKAKPRRTLNTQAQARKTALIQSLRR GTPWQPSGGLNSDQYDDDDDDDDLGDNEDYLDYADDIDDDENYSDDSTYDDSDDGSMD RTIAEVQVQLRRHTAESSETEKKGSKSSSSSEIFTASSATNVNNNIVEGEPKRKVTDP VETHFIDVGSLTYGSVFGLGEKMEHRVIMARTVVQCLLLPRFWLLEEEQNPGNIWHRR RFYFECNVPSRQDLFTNFLKTRQWNKFRHDYIQSLLNREEQGNITKEEDIPIMCRIVE TSDDAT" misc_feature 404..727 /gene="LOC108058420" /note="effector domain of the CAP family of transcription factors; members include CAP (or cAMP receptor protein (CRP)), which binds cAMP, FNR (fumarate and nitrate reduction), which uses an iron-sulfur cluster to sense oxygen) and CooA, a heme containing CO...; Region: CAP_ED; cd00038" /db_xref="CDD:237999" misc_feature order(623..628,653..661) /gene="LOC108058420" /note="ligand binding site [chemical binding]; other site" /db_xref="CDD:237999" ORIGIN 1 tcacctatat gggtgtctag ataacaaaac aaaaacactt acagacctac acaaaaaacc 61 aaaaaaatac aaaactaaca agaaaccact aataaatcaa taatccatta cacaaatggc 121 ggcgaaacgc acccgtgatg cggatatcgt caagcacaag atggacctgc gggtccgatt 181 caagaaatta gttcgggcgg tcattatgaa ccagacgtgg ctctccgacg aggaggagca 241 gggaatctca atgaatgtga aaaagaatgt cgctttgatg cgccaaaaac gcaagccagg 301 catgcttacc gtagcggata aggctctatt gcgttcgaat cccgcattca ggacaattga 361 ggaacgcaag aagctttgca tgctaatagc aggtctgaat tgtttctcta ggattccacc 421 gaaaattcga tcgcgcatgg tgccggtcct taagtttatg tccattaatg aatcgcgatt 481 aattatcaag gacggggata tgcccatttc cgtttatttt atactgaatg gcgaggtcga 541 gatgaaaaag accatataca ataaggctac aaaacaagag gatgccgttc cggaggctat 601 ttttgggcca ggtgactgct ttggcgacgt tgaaatggtt gaagattgcc cgagaatgaa 661 tacctatata gccttgtcta gctgtgaggt tttatcgtta tacgaccagg actatgagcg 721 catcttgaaa ccatttatgt tgaaacaatg gaatgaaaag aagcttgcac taaaagcatt 781 tgactatttt gattttctga gccccgaaca gataattctc gcttgcaagt actcttactt 841 ggttcagtat gagcccctgg agaccattta tctgggcgat aagggttctt tgggttatgt 901 gcgatttatt cttagtggag agtgcgtcat tttgcagtgt ttgagcatga aggtcaccaa 961 tgcggatggc aaggtcaact acgagctgac tgaaatcgac aaggataagg agggacttga 1021 tatgtttcaa tcctggaagg atctcaggag ccaagcgcaa attgttgaca tacaggacat 1081 tttggcctct acctcctcct cctccgatga tgtcgaagga ggtgtcacaa agaaaaagca 1141 agcgatgcgc aaaatgggtc tagctgagat tgagaagttc tgtggcatcc gcgactcggc 1201 cacgcctaaa ggaaagaaag cgaagccgcg gagaacacta aatacgcagg cacaggccag 1261 aaaaacagcg ttgatccaat cactgaggcg cggaactcct tggcagccaa gtgggggact 1321 taattccgat caatatgacg acgacgatga tgatgatgat ctaggcgata atgaagatta 1381 tttggattat gccgacgata tcgatgatga tgagaattat tctgatgaca gcacatatga 1441 tgactcggac gatggttcca tggacagaac cattgcggag gtgcaagtgc agctaaggcg 1501 acacaccgcc gaaagttcag aaacggaaaa gaagggatcc aagtccagtt cgtcatcgga 1561 aatattcacg gccagttcgg cgaccaacgt taataataac attgttgagg gcgaaccaaa 1621 acgtaaagtt accgatcctg tcgaaaccca ctttatagac gtaggctcac tgacctacgg 1681 cagcgttttt ggtctgggcg aaaagatgga gcaccgtgtt attatggccc gaaccgtcgt 1741 acaatgtctg ctccttccac gcttttggct actggaagag gaacagaatc ctggtaacat 1801 atggcaccgc cgacgcttct acttcgagtg caatgtgccc tcgcgtcagg atctgtttac 1861 caactttctc aagacccggc agtggaacaa attccgacat gactacattc aaagcctgct 1921 gaatcgcgag gagcagggca acattaccaa ggaggaggat atacccatta tgtgtcgcat 1981 tgtggagact agcgatgatg ccacataatg aatgaacaca agtttatatc caaattatct 2041 gtgatcttgc aataaaacgt gcttccaatt ctaatt