Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017143134 5970 bp mRNA linear INV 09-DEC-2024 transcript variant X11, mRNA. ACCESSION XM_017143134 VERSION XM_017143134.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017143134.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5970 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5970 /gene="OtopLa" /note="Otopetrin-like a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108058416" CDS 224..2917 /gene="OtopLa" /codon_start=1 /product="proton channel OtopLc isoform X8" /protein_id="XP_016998623.1" /db_xref="GeneID:108058416" /translation="MGGGEVKVATVDVEGGDNMATLPVSRSHTAGSTDSAEKNNAANK EMELKNVMPQPLQRTSLFIVTSLVYAILLIVVCIAYVISDVTTHRLPVLYYETFFTYL YGVSILFLLYVFCFLLQESSCCNGGNGGSKPKPQPKEKKSKKAKNADPADSKDAKGSK DSGKAAKGAAYQEAPVDAEVAVTPKNVRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIY IGLEFGSFFEIPFDSPCHHILIGVNPLLQMIFTFMQMYFIFMNARLNIHRFKVIARFG LMHVVATNICVWIRTLVKESLLEITIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRT HAGPNSEFEVLDGEDILPKDVYKSDNVLSKLVRNTVDGISKSLGMGGDLTSTSSTTST TTRAPFTTPNYQWHSTTMARKLKKFITSATTAATTAAGGSGTTTTSSTTISPSTTTST IDPSSSTTTTTTTFSPFSTTTATNNNLETSSGLQRLLSSSANPPSLAPVDGFGSAVTP TSVSGSGSFMDSFLSSTLSPASSTEGSASIMNNLFGQQGPMENSFQTYSDLGHEEVTG LVSFENLESLDNIYPAALSSNIGTLNSTACGRIDIMGTIVYDSAPYLYPFIIEYSLIG AVVLYVMWKHIGRYPGRMNDEDLEHRLEVMLSRRAVAMAQQQRSGRVDCVGSSKGLFF GLLLLVGALICLILFFVLVRHQQFSLLAIYLADASHCILMAFAILAIIVGFIRVKNLK FRCEEQSNLNDILLRISAFGLFTYSVFSIIAGSLKVLESEPSLLVTTTGGVAVFQVIL QLLFIADVSRRRVHLPEHDRSKPGRQIVTFLLICNVAMFAIYTFEAQKVFANPVQLEF YGFVPWSIIQRITLPLCIFHRFHSAVTLAEIWKTTYKARLE" misc_feature 830..>1273 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" misc_feature <1958..2857 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" polyA_site 5970 /gene="OtopLa" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccgtttcagt ttcagttgta gttggatagt aaagggtctt ggacgtgtcg agcgaatcgt 61 tcgccagagt taagagctgt gaactgtgca attaaggaaa caagaacaaa caagtcgccg 121 ccgcgaagga ccaacaaatc ctatcgccta tcgataaaga tcggaaatcg aagatcgtcg 181 ttaaaaagcc agcacaacgg agaccgaaac ggaaacagag gcaatgggcg gcggtgaagt 241 gaaggtcgct accgtcgacg tcgagggcgg tgacaacatg gccacgctgc cggtgtcccg 301 ctcgcatacc gccggcagca cagacagcgc cgagaagaac aacgcggcca acaaggagat 361 ggagctcaag aatgtcatgc cgcagccgct gcagaggaca tcgctgttca tcgtgaccag 421 tctggtgtac gcgatcctac tgatcgtcgt ctgcattgca tacgtaatca gcgatgtaac 481 cacccaccga ctgccggttc tctactacga gacattcttc acatatctct acggcgtcag 541 catactcttc ctcctttacg tcttctgttt cctgctgcag gagagctctt gctgcaatgg 601 cggcaatggt ggcagcaaac cgaaacccca acccaaggag aagaagtcga agaaagccaa 661 aaatgccgat ccggccgatt cgaaggatgc gaagggctct aaggactcgg gcaaggcagc 721 caagggcgcc gcatatcagg aagcacccgt ggatgccgag gtggccgtca ccccaaagaa 781 tgtgcgcaag cgcaagacaa cccatagtga cctgacgcac ggtagctttt ttctgcgcgt 841 aggagccatt gctttcggat tgggcgccat gatttatatt ggcctggagt ttggatcgtt 901 cttcgaaata cccttcgatt cgccatgcca tcacattctg atcggcgtaa acccactgct 961 ccaaatgata ttcaccttca tgcagatgta tttcatattc atgaatgccc ggctgaacat 1021 ccaccgcttc aaggtgatcg cccgctttgg cctgatgcac gtggtggcca ccaacatatg 1081 cgtgtggatt cgcacgctgg tcaaggaatc gctgctcgag attacgatct atcaccagaa 1141 gaacgaaccg gaggcgggag cctcctccat tgcccattcg atacggcagc atgccctgcg 1201 tcatgctggc actgtgctga gaactcatgc gggacccaat agcgagttcg aggttctcga 1261 cggcgaggac attctgccca aggatgtgta caaaagcgac aatgtgctgt cgaagctggt 1321 tcgcaataca gtggatggta tttccaagag tctgggaatg ggtggtgatc taaccagcac 1381 tagtagcacc acctcgacga cgacgagggc tccgtttacc actccgaact accaatggca 1441 cagcactact atggcccgca agttgaagaa gtttatcacc agcgccacca cagcggcgac 1501 cacggcggcg ggcggcagtg gcaccaccac caccagtagc accaccatct caccttcgac 1561 caccaccagt accattgacc catcatcgag caccaccacc accaccacca ccttcagtcc 1621 atttagcacc accactgcca cgaataataa tctcgagacc agcagcggcc tgcagcgcct 1681 tctatcatcc agcgctaatc cgccgagcct ggcgccagtc gatgggttcg gttccgctgt 1741 tacgcctact tccgtttccg gttcgggatc ctttatggat tccttcctgt ccagcacctt 1801 gagcccggca agcagcaccg aaggctcggc cagcataatg aacaacctgt tcggccagca 1861 gggacccatg gagaatagct tccaaacgta ttcggatctg ggccacgaag aggtcaccgg 1921 gctggttagc ttcgagaatt tggagagcct ggacaatatc tacccggcgg ccctgtcctc 1981 caatatcggc acactcaact ccaccgcctg cggaaggatc gatataatgg gcaccattgt 2041 ctacgattcg gcgccgtatc tgtatccatt tattatcgaa tactcgctga tcggggcggt 2101 ggttttgtat gtcatgtgga agcatatcgg tcgctatccc ggcaggatga acgatgagga 2161 cttggagcac cggctggagg tgatgctatc gcgcagggcg gtggccatgg cgcagcagca 2221 gcgatccgga cgcgttgact gcgtcggctc gtcgaagggc ctgttctttg ggctcctgct 2281 gctggtcgga gcgctcatct gcctgatact cttcttcgtc ttggtgcgcc atcagcagtt 2341 ctcgctgttg gccatttacc tcgccgacgc cagccactgc attctgatgg cctttgccat 2401 actggccatt atagttggat ttatcagggt caagaacctg aagttccgct gcgaggagca 2461 gtcgaacctg aacgacatat tgctgcgcat atcggccttt ggcctgttca cctactcggt 2521 gttcagcatc atcgccggca gcctgaaggt cctggagagc gagccgagcc tgctggtgac 2581 gaccaccggg ggcgtggccg tcttccaggt gatcctgcag ctgctcttca tcgccgatgt 2641 gtcccgccgc cgcgtccacc tgccggagca cgatcgcagc aagccgggcc gccagatagt 2701 caccttcctt ctcatctgca acgtggccat gttcgccatc tacacattcg aagctcaaaa 2761 agtattcgcc aatcctgttc agctggagtt ctacggcttt gtgccctggt cgatcatcca 2821 gcgcatcaca ctgcccctgt gcatattcca tcgattccac agcgccgtga cactcgccga 2881 gatctggaag accacctaca aggcacgcct ggagtaagat gtctatatag gccgatgtgg 2941 gagttatgaa aaaatgcacc aaaccaaaat gtagcgagcc cagaacgcaa atagaaatca 3001 agtgaagagt tagtttctaa ttacgtatta aaaacatata tgcgtactac atataatata 3061 catattatac attaatgcag atatgattat tatttttttg tttgacaacc aaagcaaagc 3121 gaaacgaaat gagaaacgaa acgaacgaac cgatttgttg attttgccct gctttccttt 3181 tttactttgt taactcgtgg aggacttaag aacttaagaa ctaagtcata gcgtttacag 3241 tttacccgaa ggaaaaccac ggcacacgtt tttaatctga gttacgtatt taattttagt 3301 tttagtttag tttaacacac tgcaatatct tgttactaaa tcgatgaatt caaattaata 3361 ttaatttctt aattgtttaa cccttatccg cttcggcaga aacagaaacc aaaaagaaat 3421 cgattaaaaa attcacataa caaataagat tgaaattact ataaaccaaa aaacaaaaaa 3481 ggttgtttac ttttcgcgta ttttttcgcg actgtgaaaa gtcaagaatc ccgggaaaag 3541 cgaacatgaa tgaacacgaa ctaaaacaca aaacagggac acaaaaagca atgccatgaa 3601 gaacgcggcc acaggaaacg gaaacgaaag gactttctta ataaatttga tctgactttt 3661 ccgcaaaaca accaataaac agtaacagcc gaaacaacaa caaactgtga tgaatttatt 3721 tgatttactg gtattattta attttatttc cgttttgttc tctcgacttg atttaatcac 3781 ttaacctctt ttgttatttt attctcagct tcacacttca ctcactgagt cgacgcaact 3841 tttgtaagaa tttagaaaca atggcgataa gacaacttca tggccaattg taaaaacaaa 3901 ttccccgaaa caccataaaa gaaaaacata aaatacgaca aaaaaaatca agagaaaact 3961 aagaaaattg tggcatttaa tggccaaaaa tacaaaaaaa aaaaaaaaca aacaattttt 4021 aatatacatt atataaaagt ttataaatgt ccattttttg attattagta gtgatgttaa 4081 aaaaaaacat aattaacgta aacataataa tatatgtatg tatgttatag caaagaatcg 4141 gataaaccaa gacattctta agctacactc gaagaaagaa atcagagaac ttgtgaacca 4201 aacgaacaaa atctttccaa gtgaatcccc gcatttatga atgaacattt ttagataaag 4261 cgaaatggag aaatcaagtg gagtgacagg aagagaaggg agaaaccatt gacaagcatc 4321 aatttgttta cagcaatgtt aaaaaaaaaa aacgaaacga acattttgaa agatatatat 4381 gccacgtata tctataaata tatgtatact aacccaccaa attcaaagta tttcaacgtt 4441 ttatacaagg agacgatgcg caagacaaga gatcggggca gctaacgacc tgtcccactc 4501 ggatcccgaa tcccgaaccc aagttcctct acccctatta acccgaaaat caaaaacctc 4561 atcccaatta cagctgcaat ctaagtcaga aagcatcagt ttgccaaaga ccaaagaaga 4621 taaagacaaa gacgttaccg aaaggcgata aatcgataaa ttgcgaatcc gattataatc 4681 tgtaatcata atccagtctt caagtctaca tatatataat gcatgttaac tgtagacgct 4741 ggttcaagca gttcaagaag aatacgtata caatactcgt aatccaatca aatgtaatgt 4801 ggtagcaaaa gcataggtaa gccaagtcga aaaatcgaac aaaccattaa agtagctcag 4861 cacacacaca ctcagtcact cacacgatcg atcactcatg gatctgggta ttcagtattc 4921 agtatcgagt attcagtatt cagtattcgg tgaatcatat atccaaacgt ttgcgaatta 4981 aattcagttt gaaacttgta cttgcgtagg ctcttagaca ttttacttga atgcatacgc 5041 ttcataagtc acatacatac atatatatat atatatttaa ctatacatat atatatataa 5101 atataaattt aaaaaagaat tgtttttttc cttaacattt agttaaacgt aagattgaat 5161 catattttac gccgtacaac cgaacagaaa aaaagtgagc agaaagaaat atttattaaa 5221 tgtttcaact aagttgtata attataagtg agaatttaca taatggaatt atgtatctgt 5281 atctaagcca gacaaaaaaa aaacaaaaaa cactgaaaac atttttggga aagcggcgaa 5341 agtaaaaaag agttgggaat tcgaattcga ttaacgttaa aatattcaga cagaaactta 5401 acgcacaaga acaaaagaga tcaacaccaa aagcagctgc taaatcccaa gaaaacagaa 5461 aaccaaatac aacatgaaca atttatatgc tcgtaagtat atagacaatt tcaataactg 5521 ataaaaatat atatacaaga aaaaaagcga aatttacatg caattcaaat acattttcca 5581 taaccgcatc aactaaacaa caattacaaa cgaattaaag tggatgaaaa cgattcgagg 5641 aatgaatatt ataaattatg gatgtgcgaa cgaaaacgcc acaaaaacca aaaattgtaa 5701 gccatttttt aatcattgtc gcatttaaga tatgataaac gagaacgaaa tacaaaattc 5761 aaaaatttct cagttctaaa aacacacgtt cagaatcaca ctgacattcg ctcaatacat 5821 tgagttcatt gcataacgaa tacaaaaatt gacatacata caacataaaa atgaagtaaa 5881 caaaacattt gatggtaaac gaacgtacag atgacataca agtaatttta aattgaataa 5941 aaactagtat taaatatgta caacaaaaaa