Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017143132 5965 bp mRNA linear INV 09-DEC-2024 transcript variant X10, mRNA. ACCESSION XM_017143132 VERSION XM_017143132.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017143132.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..5965 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..5965 /gene="OtopLa" /note="Otopetrin-like a; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108058416" CDS 189..2912 /gene="OtopLa" /codon_start=1 /product="proton channel OtopLc isoform X7" /protein_id="XP_016998621.1" /db_xref="GeneID:108058416" /translation="MGGGEVKVATVDVEGGDNMATLPVSRSHTAGSTDSAEKNNAANK EMELKNVMPQPLQRTSLFIVTSLVYAILLIVVCIAYVISDVTTHRLPVLYYETFFTYL YGVSILFLLYVFCFLLQESSCCNGGNGGSKPKPQPKEKKSKKAKNADPADSKDAKGSK DSGKAAKGAAYQEAPVDAEVAVTPKNVRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIY IGLEFGSFFEIPFDSPCHHILIGVNPLLQMIFTFMQMYFIFMNARTRPPFQLNIHRFK VIARFGLMHVVATNICVWIRTLVKESLLEITIYHQKNEPEAGASSIAHSIRQHALRHA GTVLRTHAGPNSEFEVLDGEDILPKDVYKSDNVLSKLVRNTVDGISKSLGMGGDLTST SSTTSTTTRAPFTTPNYQWHSTTMARKLKKFITSATTAATTAAGGSGTTTTSSTTISP STTTSTIDPSSSTTTTTTTFSPFSTTTATNNNLETSSGLQRLLSSSANPPSLAPVDGF GSAVTPTSVSGSGSFMDSFLSSTLSPASSTEGSASIMNNLFGQQGPMENSFQTYSDLG HEEVTGLVSFENLESLDNIYPAALSSNIGTLNSTACGRIDIMGTIVYDSAPYLYPFII EYSLIGAVVLYVMWKHIGRYPGRMNDEDLEHRLEVMLSRRAVAMAQQQRSGRVDCVGS SKGLFFGLLLLVGALICLILFFVLVRHQQFSLLAIYLADASHCILMAFAILAIIVGFI RVKNLKFRCEEQSNLNDILLRISAFGLFTYSVFSIIAGSLKVLESEPSLLVTTTGGVA VFQVILQLLFIADVSRRRVHLPEHDRSKPGRQIVTFLLICNVAMFAIYTFEAQKVFAN PVSRYVQLEFYGFVPWSIIQRITLPLCIFHRFHSAVTLAEIWKTTYKARLE" misc_feature 795..>1256 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" misc_feature <1941..2852 /gene="OtopLa" /note="Region: Otopetrin; pfam03189" /db_xref="CDD:460840" polyA_site 5965 /gene="OtopLa" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 aaaataaacc ctgcgcaaat tgcttcattt agagttaaga gctgtgaact gtgcaattaa 61 ggaaacaaga acaaacaagt cgccgccgcg aaggaccaac aaatcctatc gcctatcgat 121 aaagatcgga aatcgaagat cgtcgttaaa aagccagcac aacggagacc gaaacggaaa 181 cagaggcaat gggcggcggt gaagtgaagg tcgctaccgt cgacgtcgag ggcggtgaca 241 acatggccac gctgccggtg tcccgctcgc ataccgccgg cagcacagac agcgccgaga 301 agaacaacgc ggccaacaag gagatggagc tcaagaatgt catgccgcag ccgctgcaga 361 ggacatcgct gttcatcgtg accagtctgg tgtacgcgat cctactgatc gtcgtctgca 421 ttgcatacgt aatcagcgat gtaaccaccc accgactgcc ggttctctac tacgagacat 481 tcttcacata tctctacggc gtcagcatac tcttcctcct ttacgtcttc tgtttcctgc 541 tgcaggagag ctcttgctgc aatggcggca atggtggcag caaaccgaaa ccccaaccca 601 aggagaagaa gtcgaagaaa gccaaaaatg ccgatccggc cgattcgaag gatgcgaagg 661 gctctaagga ctcgggcaag gcagccaagg gcgccgcata tcaggaagca cccgtggatg 721 ccgaggtggc cgtcacccca aagaatgtgc gcaagcgcaa gacaacccat agtgacctga 781 cgcacggtag cttttttctg cgcgtaggag ccattgcttt cggattgggc gccatgattt 841 atattggcct ggagtttgga tcgttcttcg aaataccctt cgattcgcca tgccatcaca 901 ttctgatcgg cgtaaaccca ctgctccaaa tgatattcac cttcatgcag atgtatttca 961 tattcatgaa tgcccggact aggccgccat ttcagctgaa catccaccgc ttcaaggtga 1021 tcgcccgctt tggcctgatg cacgtggtgg ccaccaacat atgcgtgtgg attcgcacgc 1081 tggtcaagga atcgctgctc gagattacga tctatcacca gaagaacgaa ccggaggcgg 1141 gagcctcctc cattgcccat tcgatacggc agcatgccct gcgtcatgct ggcactgtgc 1201 tgagaactca tgcgggaccc aatagcgagt tcgaggttct cgacggcgag gacattctgc 1261 ccaaggatgt gtacaaaagc gacaatgtgc tgtcgaagct ggttcgcaat acagtggatg 1321 gtatttccaa gagtctggga atgggtggtg atctaaccag cactagtagc accacctcga 1381 cgacgacgag ggctccgttt accactccga actaccaatg gcacagcact actatggccc 1441 gcaagttgaa gaagtttatc accagcgcca ccacagcggc gaccacggcg gcgggcggca 1501 gtggcaccac caccaccagt agcaccacca tctcaccttc gaccaccacc agtaccattg 1561 acccatcatc gagcaccacc accaccacca ccaccttcag tccatttagc accaccactg 1621 ccacgaataa taatctcgag accagcagcg gcctgcagcg ccttctatca tccagcgcta 1681 atccgccgag cctggcgcca gtcgatgggt tcggttccgc tgttacgcct acttccgttt 1741 ccggttcggg atcctttatg gattccttcc tgtccagcac cttgagcccg gcaagcagca 1801 ccgaaggctc ggccagcata atgaacaacc tgttcggcca gcagggaccc atggagaata 1861 gcttccaaac gtattcggat ctgggccacg aagaggtcac cgggctggtt agcttcgaga 1921 atttggagag cctggacaat atctacccgg cggccctgtc ctccaatatc ggcacactca 1981 actccaccgc ctgcggaagg atcgatataa tgggcaccat tgtctacgat tcggcgccgt 2041 atctgtatcc atttattatc gaatactcgc tgatcggggc ggtggttttg tatgtcatgt 2101 ggaagcatat cggtcgctat cccggcagga tgaacgatga ggacttggag caccggctgg 2161 aggtgatgct atcgcgcagg gcggtggcca tggcgcagca gcagcgatcc ggacgcgttg 2221 actgcgtcgg ctcgtcgaag ggcctgttct ttgggctcct gctgctggtc ggagcgctca 2281 tctgcctgat actcttcttc gtcttggtgc gccatcagca gttctcgctg ttggccattt 2341 acctcgccga cgccagccac tgcattctga tggcctttgc catactggcc attatagttg 2401 gatttatcag ggtcaagaac ctgaagttcc gctgcgagga gcagtcgaac ctgaacgaca 2461 tattgctgcg catatcggcc tttggcctgt tcacctactc ggtgttcagc atcatcgccg 2521 gcagcctgaa ggtcctggag agcgagccga gcctgctggt gacgaccacc gggggcgtgg 2581 ccgtcttcca ggtgatcctg cagctgctct tcatcgccga tgtgtcccgc cgccgcgtcc 2641 acctgccgga gcacgatcgc agcaagccgg gccgccagat agtcaccttc cttctcatct 2701 gcaacgtggc catgttcgcc atctacacat tcgaagctca aaaagtattc gccaatcctg 2761 taagtagata tgttcagctg gagttctacg gctttgtgcc ctggtcgatc atccagcgca 2821 tcacactgcc cctgtgcata ttccatcgat tccacagcgc cgtgacactc gccgagatct 2881 ggaagaccac ctacaaggca cgcctggagt aagatgtcta tataggccga tgtgggagtt 2941 atgaaaaaat gcaccaaacc aaaatgtagc gagcccagaa cgcaaataga aatcaagtga 3001 agagttagtt tctaattacg tattaaaaac atatatgcgt actacatata atatacatat 3061 tatacattaa tgcagatatg attattattt ttttgtttga caaccaaagc aaagcgaaac 3121 gaaatgagaa acgaaacgaa cgaaccgatt tgttgatttt gccctgcttt ccttttttac 3181 tttgttaact cgtggaggac ttaagaactt aagaactaag tcatagcgtt tacagtttac 3241 ccgaaggaaa accacggcac acgtttttaa tctgagttac gtatttaatt ttagttttag 3301 tttagtttaa cacactgcaa tatcttgtta ctaaatcgat gaattcaaat taatattaat 3361 ttcttaattg tttaaccctt atccgcttcg gcagaaacag aaaccaaaaa gaaatcgatt 3421 aaaaaattca cataacaaat aagattgaaa ttactataaa ccaaaaaaca aaaaaggttg 3481 tttacttttc gcgtattttt tcgcgactgt gaaaagtcaa gaatcccggg aaaagcgaac 3541 atgaatgaac acgaactaaa acacaaaaca gggacacaaa aagcaatgcc atgaagaacg 3601 cggccacagg aaacggaaac gaaaggactt tcttaataaa tttgatctga cttttccgca 3661 aaacaaccaa taaacagtaa cagccgaaac aacaacaaac tgtgatgaat ttatttgatt 3721 tactggtatt atttaatttt atttccgttt tgttctctcg acttgattta atcacttaac 3781 ctcttttgtt attttattct cagcttcaca cttcactcac tgagtcgacg caacttttgt 3841 aagaatttag aaacaatggc gataagacaa cttcatggcc aattgtaaaa acaaattccc 3901 cgaaacacca taaaagaaaa acataaaata cgacaaaaaa aatcaagaga aaactaagaa 3961 aattgtggca tttaatggcc aaaaatacaa aaaaaaaaaa aaacaaacaa tttttaatat 4021 acattatata aaagtttata aatgtccatt ttttgattat tagtagtgat gttaaaaaaa 4081 aacataatta acgtaaacat aataatatat gtatgtatgt tatagcaaag aatcggataa 4141 accaagacat tcttaagcta cactcgaaga aagaaatcag agaacttgtg aaccaaacga 4201 acaaaatctt tccaagtgaa tccccgcatt tatgaatgaa catttttaga taaagcgaaa 4261 tggagaaatc aagtggagtg acaggaagag aagggagaaa ccattgacaa gcatcaattt 4321 gtttacagca atgttaaaaa aaaaaaacga aacgaacatt ttgaaagata tatatgccac 4381 gtatatctat aaatatatgt atactaaccc accaaattca aagtatttca acgttttata 4441 caaggagacg atgcgcaaga caagagatcg gggcagctaa cgacctgtcc cactcggatc 4501 ccgaatcccg aacccaagtt cctctacccc tattaacccg aaaatcaaaa acctcatccc 4561 aattacagct gcaatctaag tcagaaagca tcagtttgcc aaagaccaaa gaagataaag 4621 acaaagacgt taccgaaagg cgataaatcg ataaattgcg aatccgatta taatctgtaa 4681 tcataatcca gtcttcaagt ctacatatat ataatgcatg ttaactgtag acgctggttc 4741 aagcagttca agaagaatac gtatacaata ctcgtaatcc aatcaaatgt aatgtggtag 4801 caaaagcata ggtaagccaa gtcgaaaaat cgaacaaacc attaaagtag ctcagcacac 4861 acacactcag tcactcacac gatcgatcac tcatggatct gggtattcag tattcagtat 4921 cgagtattca gtattcagta ttcggtgaat catatatcca aacgtttgcg aattaaattc 4981 agtttgaaac ttgtacttgc gtaggctctt agacatttta cttgaatgca tacgcttcat 5041 aagtcacata catacatata tatatatata tttaactata catatatata tataaatata 5101 aatttaaaaa agaattgttt ttttccttaa catttagtta aacgtaagat tgaatcatat 5161 tttacgccgt acaaccgaac agaaaaaaag tgagcagaaa gaaatattta ttaaatgttt 5221 caactaagtt gtataattat aagtgagaat ttacataatg gaattatgta tctgtatcta 5281 agccagacaa aaaaaaaaca aaaaacactg aaaacatttt tgggaaagcg gcgaaagtaa 5341 aaaagagttg ggaattcgaa ttcgattaac gttaaaatat tcagacagaa acttaacgca 5401 caagaacaaa agagatcaac accaaaagca gctgctaaat cccaagaaaa cagaaaacca 5461 aatacaacat gaacaattta tatgctcgta agtatataga caatttcaat aactgataaa 5521 aatatatata caagaaaaaa agcgaaattt acatgcaatt caaatacatt ttccataacc 5581 gcatcaacta aacaacaatt acaaacgaat taaagtggat gaaaacgatt cgaggaatga 5641 atattataaa ttatggatgt gcgaacgaaa acgccacaaa aaccaaaaat tgtaagccat 5701 tttttaatca ttgtcgcatt taagatatga taaacgagaa cgaaatacaa aattcaaaaa 5761 tttctcagtt ctaaaaacac acgttcagaa tcacactgac attcgctcaa tacattgagt 5821 tcattgcata acgaatacaa aaattgacat acatacaaca taaaaatgaa gtaaacaaaa 5881 catttgatgg taaacgaacg tacagatgac atacaagtaa ttttaaattg aataaaaact 5941 agtattaaat atgtacaaca aaaaa