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LOCUS XM_017143089 6822 bp mRNA linear INV 09-DEC-2024 (fs(1)N), mRNA. ACCESSION XM_017143089 VERSION XM_017143089.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017143089.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..6822 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..6822 /gene="fs(1)N" /note="female sterile (1) Nasrat; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058397" CDS 58..6396 /gene="fs(1)N" /codon_start=1 /product="uncharacterized protein fs(1)N" /protein_id="XP_016998578.2" /db_xref="GeneID:108058397" /translation="MLIWHLLLWPAIIAIASATSAAQKKAEVAKLRSELEKALEEDDA VAPPGVVVAPGWTQPSGHPPPGKATKVVVNPSTLSQAAAIRQEIQQAVAHQGQNQEVV QLEAQLKERGSTKETPKLANPRKELLGAAGQENPEANVVESQAASLNHIDLEQLQRLE LSKRRTRDMLILQRIEELQNFSLPMDVDRWLTLQANGSQFLVGQQSEDGFLVLKEDLT ILQSFLHPLPVTAWLGFEGLLLLASQDQLTWLRLNETIGLETFWHWPIAGSRVTQLRG FSWEGRDFLALVAEHTLSIYSYDLKAQEFWISQRLQLAEIITDLAIMDTGRELLLAVG QRDEAFIYVWNWSSGSAEQPLQLRQKIGAPEVTGITAFQMGGRSYLALGGILAQILVY VQGHLVPRTILGQNFGFVEHFLPIPVRSYRDDLLLLVQHRVVFDPHSLLVLEVLVWTG EAFEAGLLPPSCGETFGAGCMLDQEWEHGLLGSVLLRRSVDQPPYVLVPRRGLFRLET QLLARNSETQDLLEIKEFMEQWVNEQEELLKLAEELLTEEEGYELYKEVITPLVISEG GTIEELFVNEARWTGADLAVDMNELLAQILQLSEELSSKKRTKRQPDSLYNFHYEQLE VEAIEAGDLLLERLNHVPFYIQNASLELPLGVLNVQELELLEAVKEELVLVEGSESHE SLHLTGDLECSFINGMPCNQLFQELVWRHQPLKLPELNVEGPIIFEDVLHVNSLNDLS FPGDFLWSQGNETSVVQAPKEFTQTLSVNAVDTSGTINAVNPQDVITLSDSQDWPGWV TFSHLEVSEELELNGSAQGRQFEEAPLNPTLLESRLIQADCHFDQLFVRGPVRLLGGL DNDTLDSLLGDLVQRSQNSGDELLVGGRKHVDQLQLPVDAHVADQRLTGIPLDDFVTK HTQQTLRNLSQLGGYVYFHQLELAEGFAYDGVRIEELLAESLRLDHNNGPLISPLTRL RFVGQSPPEFSRLQVESRLNEVPLSSGYQRLHEPLHLKGANFSRLLAGQAQINHDIVG DGLLNGKNLGDLLQEQPHTWSGEVHVQELFLPRGVQTQKLQGLKANLLLDFLQQLDEL PLLILQGRLQVEHIEVSGEVQVETLNGVDINELQRQVVWLDRPNELRTRWILAEAPQF QGNLRILGSYNDRLLPELLDDIVLRSDSQEVMIIEGTKSFLAPVHVADLRLAALNGIP FERVANKVSPLKLEGNVRLLGRLFVEELQLNDGGVTGELEKLLRWDPTIQRFVHRGLI ELPGGNHGLENLVVLGHLGNRSEEPIRELFDQLIFKQQPSGGAHLQDHKTFTGRIRIE DGAYINRFNGLDVDQLLGSLIYVDSPEEAIVETPVRFASSVKMDQLQADRLVLTGDLL HGCNVSQWLRDTIRVDRDIQMQKMTFAKGSLDGNELQVEELNQVNLSRVVTRYTEQHL SDPLQADELLLDGQLVVHGRVNGHNLTEEYANTLMIHPTKEQHVETPLFLGSLFVGGN LEINSPVNGLNLSDVASLDEDQVLLQSPLYFATLHAPFLKAEQKLNGFDFKDWYEGSL WARGRDQQEITGNWRVNKLKVKQSSDDDDLRPRRQTPEESYRELCEGLSRILLPYQVQ RLRKSFSLKQAKDQPNIRRIFALEAPGGLAYLLINEQGCWTRIHRWNGSSFDRTDGFQ SGPIDQVVALSSSSQKEEEFAFMTSYELRDDDNEASKNCSGLKPILLSGWQVNKTINT EKMQIPQDTLRNLKEQHEQRPLPIHSWEYQQAIKYLKRPIIESQLGSQWQENETNPLD LARMRRRLLDSLEFQLQAEVNITQLSIPESDLFDEHLVEDFLQLMHQLHSLRRHLNTD TLPLPNTPAKVLAARSAQLIWPTLQELRGLNDQDNDTLTRFQEIILEQTLLDVLTLAN KESDDNNDDEKLHAVIQRLRRLKEDLKEQEDLENPEAASSSNREEQFLPPDWRPVSTI RLIVGPASRGRLLYARLTVLQPADGLPPTTPSSAPAAHIQLHHVNGSLFQSLAAERGA RELVTLRIRDETLLAFVEGCCRIRVLIYRGVQGFVEFARFRASKSDGNGEILQLVSLR LPLRRPPGAMYSLAVVQARSVTFYELVIAGLLEPWMQC" polyA_site 6822 /gene="fs(1)N" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 tgatttcacg tgttctttgc ttttttcttt tgttaattgt tattattaat aaataaaatg 61 cttatttggc atttgctgct ctggccagca ataatagcca tagccagtgc caccagtgcc 121 gcacagaaaa aggccgaagt cgccaagctg cgtagcgaac tggaaaaagc tctcgaagaa 181 gacgatgcag ttgctccgcc aggagtggtg gtggcacctg gttggaccca accatctggt 241 catccgcccc ccggaaaagc caccaaagtg gtggtgaacc catccacgct gagccaagca 301 gccgccattc gccaagagat tcagcaggcg gtggctcacc agggacaaaa ccaggaggta 361 gtgcagctgg aggcgcagct caaggaaagg ggcagcacca aggagacgcc taaactagct 421 aatccccgaa aggaactttt aggtgccgct ggtcaggaga atccggaggc caatgtggtg 481 gaatcccaag cagcttccct aaatcacata gatctggagc aactgcagcg tttggagctg 541 tccaagaggc gcacccgcga tatgctgatc ctgcagcgaa tcgaggagct gcagaacttt 601 agtctgccca tggatgtgga tcgctggctc actttgcagg ccaatggaag ccagtttcta 661 gtgggtcagc aatcggagga cggcttcctg gtgctcaaag aagacttgac tatcctgcaa 721 agctttctgc atccccttcc ggtgaccgcc tggctgggat tcgagggtct cctcctgttg 781 gcctcacagg atcagctcac ttggctgcgt ttaaacgaga ctattggact ggaaaccttc 841 tggcattggc caatagctgg ctccagggtc acccagctgc ggggattcag ctgggaggga 901 agggatttcc ttgccctcgt tgcagagcac acacttagca tttattcgta tgatctgaag 961 gcgcaggagt tctggatttc gcagcgtttg cagctggcgg agatcataac cgacctggcc 1021 atcatggata cgggcaggga actcctcctg gctgtgggcc aaagggatga ggcattcata 1081 tatgtttgga attggagttc cgggagcgca gagcaacccc tgcaactgcg ccagaagatt 1141 ggagcacccg aggtgacagg catcactgcc ttccaaatgg gcggacgcag ctatttggcg 1201 ctgggcggga tcctggccca gatcctggtc tatgtgcagg gtcatctagt gccacgcacc 1261 atcctgggcc agaactttgg cttcgtcgag cactttctgc ccattccggt gcgcagctac 1321 cgggatgatc tcctcctgct cgtccagcat cgcgtggtct tcgatccgca ctcgctgctc 1381 gtcctggagg ttctcgtctg gacgggcgag gccttcgagg cgggcctcct gcctccctcg 1441 tgtggtgaga cctttggagc aggctgcatg ctggatcagg agtgggagca tgggctccta 1501 gggtctgtcc tcctccgtcg ttccgtggat caaccgcctt atgtgctggt gcccagaagg 1561 ggactctttc ggctggaaac tcagctgctg gcgaggaatt cagagacgca ggacctgctg 1621 gagatcaagg agttcatgga gcagtgggtc aacgaacagg aggagctact aaaactggca 1681 gaagaactct taacagaaga ggagggttat gaactctata aagaagttat aacccccttg 1741 gtaatcagcg aaggaggaac cattgaggag ctctttgtga acgaagcccg ctggacagga 1801 gcagatttgg ctgtggatat gaacgagctg ctcgcgcaga ttctccagct gagcgaggaa 1861 ctgagttcca aaaagcgcac taagcgtcaa ccagattcgc tctataactt tcactacgag 1921 cagctggagg tggaggccat tgaggcgggg gatcttctcc tggagaggct caatcatgtg 1981 cccttttaca tacagaatgc ctcgctggag ttgcctctag gtgtcctcaa tgtccaggag 2041 ctggaattac tagaggccgt taaggaggag cttgtcctgg tcgaaggtag cgaatcccat 2101 gagtcactgc atcttactgg cgatttggag tgcagcttta tcaatggaat gccgtgcaat 2161 caactatttc aggaactagt gtggcgtcat cagccgctca agctgcctga attgaatgtg 2221 gagggaccca tcatatttga ggatgttctt catgtcaact ctctcaacga tcttagcttc 2281 ccaggagact ttctctggtc gcagggcaac gagacgagtg ttgtgcaagc gcccaaggag 2341 tttacccaaa cgctctctgt caatgccgtg gacacttcgg gaaccattaa tgccgtgaat 2401 ccgcaggatg tcatcaccct cagcgattcg caggactggc cgggatgggt tactttctcg 2461 catctagagg tttccgagga attggagctc aatggcagcg cccagggccg ccagttcgag 2521 gaggcgccct tgaatcccac cctgctggaa tcgcgtctca tccaagcgga ctgccatttc 2581 gatcagcttt ttgtgcgcgg tcccgtgcga cttcttggtg ggctggacaa cgacaccctg 2641 gactccctgc tgggcgatct cgttcagcgt tcccagaatt cgggcgacga actacttgtg 2701 gggggaagaa agcacgtgga tcagcttcaa ttgccagtgg atgcccatgt ggcggatcag 2761 cgactcactg ggattcccct cgatgatttt gtaaccaaac atacgcagca aacgctaagg 2821 aatctcagcc aactaggtgg ctatgtctac tttcatcagc tggaacttgc cgagggtttc 2881 gcctacgatg gcgttcgaat cgaagagctg ctcgccgaga gtctgcgatt ggatcataat 2941 aatgggccgc tgatttcccc cctcactcgc ctgcgttttg ttggccaatc ccctccagaa 3001 ttctcccgcc ttcaggtgga gagcaggttg aacgaggtgc ctctatcgag tggctaccag 3061 cggctccatg aaccgcttca tctcaaggga gccaacttta gtcgcttgtt agcaggacaa 3121 gctcaaatca atcatgatat agttggtgat ggactcttga atggcaagaa tttgggagat 3181 ttactgcagg agcaaccaca cacttggtcg ggtgaagtgc atgtccagga actgtttctc 3241 ccacgaggag ttcaaacgca aaagttacag ggcctgaagg ccaacctttt gctggatttc 3301 ctgcagcagc tggacgagct gcccttgctg attctccagg gacgcctcca agtggagcac 3361 atcgaagtga gcggggaagt ccaggtggaa accctaaacg gagtggatat caacgaactt 3421 caaagacagg tggtgtggct ggatagaccc aatgaactga ggacgcgttg gattctcgcc 3481 gaagctcccc agttccaggg aaacctacga atcctgggca gctacaacga tcgcctgctt 3541 cccgagttgc tagacgacat cgtgctgcgt tcggatagcc aggaagtaat gataattgag 3601 ggcaccaaaa gcttcttggc tcccgttcac gtggcagatc tccgattggc ggccctcaat 3661 gggattccct tcgaacgggt ggctaataaa gtgagtccat tgaagctgga aggcaatgtc 3721 cgtctcctag gacgactctt tgtggaggaa ctgcagttga atgatggcgg agtaaccgga 3781 gaactggaga aactcctccg ttgggatccc actatccaaa gattcgttca tcgtggattg 3841 attgaactgc cgggaggaaa tcatggactg gagaatctgg tggtgctggg ccacttgggc 3901 aatcgcagcg aggagcctat tagggagctc ttcgatcaac tgatcttcaa gcagcagcca 3961 agtggcggtg cccatttgca ggaccacaaa acttttacag gtcgtattcg catcgaagat 4021 ggagcttaca tcaatcgatt caatggtctc gatgtggatc agctcctggg atccctaatc 4081 tatgtagatt cgcccgagga agctattgta gaaacccccg ttcgctttgc atcctccgtt 4141 aaaatggatc agctgcaagc agatcgtctc gtactcactg gagatctcct ccatggctgc 4201 aatgtgagtc agtggctccg cgatacgatt cgtgtggatc gcgatattca aatgcagaaa 4261 atgacctttg ccaagggatc gctggatggg aatgaattgc aagtggagga gctcaatcaa 4321 gtgaatcttt cgcgagtggt cacccgttac acagagcagc atctaagtga tcccctccag 4381 gcagacgaac tcctactcga cgggcagttg gtggtccatg gaagggttaa tggccataat 4441 ctaaccgagg aatatgccaa cactttgatg attcatccta cgaaagagca gcatgtggag 4501 acacctctat tcttgggtag cctttttgtt ggcggaaatc tggagattaa ttctcctgtt 4561 aatggcttga atctcagcga tgtggcctct ttggatgagg atcaagtgct cctccagtca 4621 ccgctgtact ttgccaccct gcatgctccg tttctaaaag ccgaacagaa actaaacggc 4681 tttgatttca aggattggta cgaaggaagc ctgtgggcgc gtggcaggga tcagcaggag 4741 atcaccggca attggcgcgt aaataaactg aaagtgaagc aatcctcgga tgatgatgat 4801 ttgcgaccac gtcgccagac tccagaggag agctaccgtg agctgtgcga gggtttgtcc 4861 cggattctcc tgccctatca ggtgcaaagg ctgcgcaaga gtttctccct gaagcaggcg 4921 aaggatcagc cgaatatacg taggattttt gccttggagg cgccgggagg cctagcctat 4981 ctgttgatta acgagcaagg ctgctggacc cgcattcacc gatggaatgg ttcctctttc 5041 gatcgaacag atggctttca gagcggaccc atagaccagg tggttgctct gagttccagt 5101 tcccagaaag aggaggagtt tgccttcatg acgagctatg agttgcggga tgatgataat 5161 gaagcctcca agaattgcag tggattgaaa cccattctct taagtggctg gcaagtcaat 5221 aagacaataa atacagagaa aatgcagata ccccaggaca cattgaggaa tctcaaggag 5281 cagcacgagc agcgaccttt acccattcac agttgggaat accagcaggc catcaagtat 5341 ctaaagcgtc ccattattga atctcagttg ggttcccagt ggcaggagaa cgaaacgaat 5401 cccctggatc tcgccaggat gcgcagacgc ctgctggatt ccttagaatt ccaactgcag 5461 gcggaggtga acatcaccca gttgagtatt cccgagagcg atctttttga cgagcacttg 5521 gtggaggatt tcctccagct aatgcatcag ttgcatagcc tgcgtcgtca tctgaacaca 5581 gacactctac ctttgccgaa tactccggcc aaagtgctgg ccgcccggag tgcccagctc 5641 atctggccaa cgctgcagga gctgcgggga ttgaatgacc aggataatga tactctaaca 5701 cgctttcaag aaataattct agagcaaacg ctattggatg ttcttacgtt ggccaacaag 5761 gaatcagatg ataataatga tgatgagaag ctgcatgctg ttatccagag attgagaagg 5821 ctgaaggagg atctcaagga gcaggaggac ctggagaacc cagaggcagc ctcctcttcg 5881 aaccgggaag agcagtttct gccgccggac tggcgacctg tttccaccat ccgcttgatt 5941 gtgggtcccg ccagtcgtgg ccgcctcctt tacgcccgct tgaccgtttt gcaacctgcg 6001 gatggcctac cgcccaccac gccctcctcc gcgcccgccg cccacatcca attgcatcat 6061 gtgaatggtt ccctctttca atcactggcc gccgagcgag gagcacgaga actagtcact 6121 ttgaggatca gggatgagac actgctggcc ttcgtggagg gatgctgccg gataagggtg 6181 ctgatctatc gaggagttca gggattcgtg gagtttgcca gatttcgagc atccaaatcg 6241 gatgggaatg gagagatctt gcaattagta tccctgcgtc tgcccctccg acggccaccg 6301 ggagccatgt attcgttggc cgtggtccaa gccagaagcg tcacgttcta tgaactggtt 6361 atagccggac tactagagcc ctggatgcag tgctgataat atcagataat atcttatata 6421 tcagataaaa tgagatggat ttcagatgta tgtcaagtgt agagattata tttatagcgt 6481 agaactacct ataactctaa atatttacat caatatctta acatctttct ataattattg 6541 ttactaataa ttattttctt ggttgtaagt gaaatgttga tttgtaaaag tgtttaattt 6601 gtaattaaat tccaaatgag ttggatttca gatggaggtt aagtgttatt taagtgaaat 6661 gttgattata attatatttt agagccttaa aactctaaat atttatatca atatcttaat 6721 atgtttctat aatatcaata ttgataattg tttttttttt gtaagtgaaa tgttgatttg 6781 taaacgtaat taaatatatg aataaatgaa atgtcaagtg ta