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LOCUS XM_017142789 2559 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_017142789 VERSION XM_017142789.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017142789.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2559 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2559 /gene="LOC108058195" /note="protein DENND6B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108058195" CDS 96..1934 /gene="LOC108058195" /codon_start=1 /product="protein DENND6B isoform X2" /protein_id="XP_016998278.2" /db_xref="GeneID:108058195" /translation="MSADARIGEKEQEKDVDASNSNPRPTTSDWVNFSQWMHCFCVVT FDLNLGQALEHVYPPEFMPSDQEVSNICYMAFPDSNSGCMGDTKFHMRLRCTTRPESL PGYNAECSPALRQDASHYWGFVYFRQKRDANLPRGYFQKSFIIITRLPFFNLYYDLLA QLAPRYFDQGTDVLRSASEQINRHWPALRVGHPLQLPLLECSYQVCIPRTTSSSRKSA AEESPPAACLATTTKVLPSVNEIELFHSLDFCMEQLYTLWELVITGEPIVVVGTSPAD CSHMVQTLLALISPLEYCAEARPYFTIHDSEFREFTQECGGKATLPACILGVTNPFFV KLLKDWPHMLRLVDNQNMQQQQQLLMGQKHARTIASATSFSGSSAKSGSGLNGSSSNG TGDASTAGLHSKYRAYLKKDKALIKKVLLGMKTKRPEHVQTALIRRHLLELTQSFMIP LERYMASLMPLQKDISPFKSAPNASSFKLDDFLATLETAGPQLTSPLKGDWKGLYRRF FRSPNFRGWYEARHRELQLTLQDLQLQALSEANLEHWAHDKQEVEIIDMILKLKQKLN LYGDKPGTQQLEGISGTGTGTQQQIRAQIECMKGLLPPDLKNVVNL" misc_feature 210..>641 /gene="LOC108058195" /note="Transport protein Avl9; Region: Avl9; pfam09794" /db_xref="CDD:430832" misc_feature 516..>974 /gene="LOC108058195" /note="DENN (AEX-3) domain; Region: DENN; cl11519" /db_xref="CDD:472208" misc_feature 822..1133 /gene="LOC108058195" /note="Stabilization of polarity axis; Region: SPA; cl40631" /db_xref="CDD:454797" polyA_site 2559 /gene="LOC108058195" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cagccactgc gattgcccat ctctgattcc ccttgtcaat gtcgcaggca gataaatatc 61 aacaaaatac atatatatag gatataggat atagaatgag cgcggatgca aggatcgggg 121 agaaggagca ggaaaaggat gtcgatgcca gcaactcgaa tccgcggcca actaccagcg 181 attgggtgaa cttctcgcag tggatgcact gcttctgcgt ggtcaccttc gatctgaatc 241 tcggccaggc cctggagcac gtctatccgc cggagttcat gcccagcgac caggaggtga 301 gcaacatctg ctacatggcc ttcccggact cgaattccgg ctgcatgggc gacaccaagt 361 tccacatgcg actgcgctgc accacacgcc ccgaatccct gccaggctac aatgccgagt 421 gctcccccgc tctccgccag gatgcctccc actactgggg cttcgtctac ttccggcaga 481 agcgcgatgc caatctgccg cgtggctact tccagaagag cttcatcatc atcacgcggc 541 tgccgttctt caatctctac tacgatctgc tcgcccagct ggcgccgcgc tactttgacc 601 agggcaccga tgtcctccgc tcggccagcg agcagatcaa caggcactgg ccagccctgc 661 gcgtgggcca tccgctccag ctgccgctgc tggagtgcag ctaccaggtg tgcattcccc 721 gcaccaccag cagcagtagg aaatccgctg cggaggaatc cccgccagcc gcttgcttgg 781 caaccaccac gaaagttcta ccctccgtca atgaaatcga gctcttccac tcgctggact 841 tctgcatgga gcagctgtac acgctgtggg agctggtcat caccggcgag cccatcgttg 901 tggtgggcac ctcgcccgcc gactgctccc acatggtcca gacgctcctg gcgctaatct 961 cccccctgga gtactgcgcc gaggcgcgtc cctacttcac catccacgac agcgagttcc 1021 gggagttcac gcaggagtgc ggcggcaagg cgacgctgcc cgcctgcatt ttgggcgtga 1081 ccaatccgtt ctttgtcaag ctgctcaagg actggccgca catgctgcgg ctggtggata 1141 accagaacat gcagcagcag cagcaactgc tgatgggcca gaagcatgcg cggactatcg 1201 cctcggccac ctcgttctcg ggcagctccg ccaagtccgg ctccggcctg aatggcagct 1261 cctcgaatgg aactggtgat gcctccaccg cggggctgca tagcaaatac cgggcctatc 1321 tgaaaaagga caaggcgctg atcaagaagg tgctgctggg catgaagacc aagcggccgg 1381 agcatgtgca aacggcgctg atacggcgcc atttgctcga gctgacgcag agcttcatga 1441 tcccgctgga gcggtacatg gcctcgctga tgccgctgca gaaggacatc agtccgttca 1501 agtcggcgcc caatgcgagc agcttcaagc tggacgactt tttggccacg ctggagacgg 1561 cggggccgca gctgacgtcg ccgctgaagg gcgattggaa ggggctgtat cggcgcttct 1621 ttcgatcgcc caatttccgc gggtggtacg aggcacgcca ccgggagctg caactgacgc 1681 tgcaggacct ccagctgcag gcgctgtcgg aggccaatct ggagcactgg gcgcatgaca 1741 agcaggaggt ggagatcatc gacatgatac tcaagctcaa gcagaaactg aatctctatg 1801 gcgacaagcc gggcacgcag cagctggagg ggatcagtgg cactggcact ggcacccagc 1861 agcagatccg ggcgcagatc gagtgcatga aggggctgct gccgccggat ctcaagaatg 1921 tggtgaacct ctgatcctag ttgtaaatcc tgtactgctc ccgccgccgc ctgtctgtct 1981 gcttgtatcc tgtgatcctg tgatcgtgtg cctgtaattt gtgtagcttg caatcgatcc 2041 ttgcgaggcg gtgctcttta tcattgtaaa taagttttat cccgagatta gtcgctgtac 2101 tttccgtgtc tagtttaatt gtaacataat cccagaagtg aaaacgatga acgatgaact 2161 ttagtccaag ccaagtatta aatgtaatcg atgcgatatc cctttaatgt tttcaacccc 2221 ttcgatcacc acaaccaatg ctcatgtcga cctcgactgt ctcaaatagc aaaactatac 2281 cttttaaacg gttcaacctg ttcaaataag ataatttgtg caactacatt gtaatattca 2341 ctcgttagag ttcttaaagt taagagtttg gtcatctatg tgtgtagaaa accggcagtt 2401 taaccaaatt tccgatgggt cgaacaatgt gatctagaga ccagttttgt tctactctaa 2461 tctttttttt aaatcgttgt gcaaactttg tatatcgcta taaagaaata tgtttatgtc 2521 tatgactgtc aaatataaga taactataca ttaccttaa