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LOCUS XM_017142788 2561 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017142788 VERSION XM_017142788.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017142788.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2561 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2561 /gene="LOC108058195" /note="protein DENND6B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108058195" CDS 95..1936 /gene="LOC108058195" /codon_start=1 /product="protein DENND6B isoform X1" /protein_id="XP_016998277.2" /db_xref="GeneID:108058195" /translation="MSADARIGEKEQEKDVDASNSNPRPTTSDWVNFSQWMHCFCVVT FDLNLGQALEHVYPPEFMPSDQEVSNICYMAFPDSNSGCMGDTKFHMRLRCTTRPESL PGYNAECSPALRQDASHYWGFVYFRQKRDANLPRGYFQKSFIIITRLPFFNLYYDLLA QLAPRYFDQGTDVLRSASEQINRHWPALRVGHPLQLPLLECSYQVCIPRTTSSSRKSA AEESPPAACLATTTKVLPSVNEIELFHSLDFCMEQLYTLWELVITGEPIVVVGTSPAD CSHMVQTLLALISPLEYCAEARPYFTIHDSEFREFTQECGGKATLPACILGVTNPFFV KLLKDWPHMLRLVDNQKNMQQQQQLLMGQKHARTIASATSFSGSSAKSGSGLNGSSSN GTGDASTAGLHSKYRAYLKKDKALIKKVLLGMKTKRPEHVQTALIRRHLLELTQSFMI PLERYMASLMPLQKDISPFKSAPNASSFKLDDFLATLETAGPQLTSPLKGDWKGLYRR FFRSPNFRGWYEARHRELQLTLQDLQLQALSEANLEHWAHDKQEVEIIDMILKLKQKL NLYGDKPGTQQLEGISGTGTGTQQQIRAQIECMKGLLPPDLKNVVNL" misc_feature 209..>640 /gene="LOC108058195" /note="Transport protein Avl9; Region: Avl9; pfam09794" /db_xref="CDD:430832" misc_feature 515..>973 /gene="LOC108058195" /note="DENN (AEX-3) domain; Region: DENN; cl11519" /db_xref="CDD:472208" misc_feature 821..1132 /gene="LOC108058195" /note="Stabilization of polarity axis; Region: SPA; cl40631" /db_xref="CDD:454797" polyA_site 2561 /gene="LOC108058195" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agccactgcg attgcccatc tctgattccc cttgtcaatg tcgcaggcag ataaatatca 61 acaaaataca tatatatagg atataggata tagaatgagc gcggatgcaa ggatcgggga 121 gaaggagcag gaaaaggatg tcgatgccag caactcgaat ccgcggccaa ctaccagcga 181 ttgggtgaac ttctcgcagt ggatgcactg cttctgcgtg gtcaccttcg atctgaatct 241 cggccaggcc ctggagcacg tctatccgcc ggagttcatg cccagcgacc aggaggtgag 301 caacatctgc tacatggcct tcccggactc gaattccggc tgcatgggcg acaccaagtt 361 ccacatgcga ctgcgctgca ccacacgccc cgaatccctg ccaggctaca atgccgagtg 421 ctcccccgct ctccgccagg atgcctccca ctactggggc ttcgtctact tccggcagaa 481 gcgcgatgcc aatctgccgc gtggctactt ccagaagagc ttcatcatca tcacgcggct 541 gccgttcttc aatctctact acgatctgct cgcccagctg gcgccgcgct actttgacca 601 gggcaccgat gtcctccgct cggccagcga gcagatcaac aggcactggc cagccctgcg 661 cgtgggccat ccgctccagc tgccgctgct ggagtgcagc taccaggtgt gcattccccg 721 caccaccagc agcagtagga aatccgctgc ggaggaatcc ccgccagccg cttgcttggc 781 aaccaccacg aaagttctac cctccgtcaa tgaaatcgag ctcttccact cgctggactt 841 ctgcatggag cagctgtaca cgctgtggga gctggtcatc accggcgagc ccatcgttgt 901 ggtgggcacc tcgcccgccg actgctccca catggtccag acgctcctgg cgctaatctc 961 ccccctggag tactgcgccg aggcgcgtcc ctacttcacc atccacgaca gcgagttccg 1021 ggagttcacg caggagtgcg gcggcaaggc gacgctgccc gcctgcattt tgggcgtgac 1081 caatccgttc tttgtcaagc tgctcaagga ctggccgcac atgctgcggc tggtggataa 1141 ccagaagaac atgcagcagc agcagcaact gctgatgggc cagaagcatg cgcggactat 1201 cgcctcggcc acctcgttct cgggcagctc cgccaagtcc ggctccggcc tgaatggcag 1261 ctcctcgaat ggaactggtg atgcctccac cgcggggctg catagcaaat accgggccta 1321 tctgaaaaag gacaaggcgc tgatcaagaa ggtgctgctg ggcatgaaga ccaagcggcc 1381 ggagcatgtg caaacggcgc tgatacggcg ccatttgctc gagctgacgc agagcttcat 1441 gatcccgctg gagcggtaca tggcctcgct gatgccgctg cagaaggaca tcagtccgtt 1501 caagtcggcg cccaatgcga gcagcttcaa gctggacgac tttttggcca cgctggagac 1561 ggcggggccg cagctgacgt cgccgctgaa gggcgattgg aaggggctgt atcggcgctt 1621 ctttcgatcg cccaatttcc gcgggtggta cgaggcacgc caccgggagc tgcaactgac 1681 gctgcaggac ctccagctgc aggcgctgtc ggaggccaat ctggagcact gggcgcatga 1741 caagcaggag gtggagatca tcgacatgat actcaagctc aagcagaaac tgaatctcta 1801 tggcgacaag ccgggcacgc agcagctgga ggggatcagt ggcactggca ctggcaccca 1861 gcagcagatc cgggcgcaga tcgagtgcat gaaggggctg ctgccgccgg atctcaagaa 1921 tgtggtgaac ctctgatcct agttgtaaat cctgtactgc tcccgccgcc gcctgtctgt 1981 ctgcttgtat cctgtgatcc tgtgatcgtg tgcctgtaat ttgtgtagct tgcaatcgat 2041 ccttgcgagg cggtgctctt tatcattgta aataagtttt atcccgagat tagtcgctgt 2101 actttccgtg tctagtttaa ttgtaacata atcccagaag tgaaaacgat gaacgatgaa 2161 ctttagtcca agccaagtat taaatgtaat cgatgcgata tccctttaat gttttcaacc 2221 ccttcgatca ccacaaccaa tgctcatgtc gacctcgact gtctcaaata gcaaaactat 2281 accttttaaa cggttcaacc tgttcaaata agataatttg tgcaactaca ttgtaatatt 2341 cactcgttag agttcttaaa gttaagagtt tggtcatcta tgtgtgtaga aaaccggcag 2401 tttaaccaaa tttccgatgg gtcgaacaat gtgatctaga gaccagtttt gttctactct 2461 aatctttttt ttaaatcgtt gtgcaaactt tgtatatcgc tataaagaaa tatgtttatg 2521 tctatgactg tcaaatataa gataactata cattacctta a