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PREDICTED: Drosophila takahashii monocyte to macrophage


LOCUS       XM_017142783            2114 bp    mRNA    linear   INV 09-DEC-2024
            differentiation factor (LOC108058191), mRNA.
ACCESSION   XM_017142783
VERSION     XM_017142783.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017142783.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2114
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..2114
                     /gene="LOC108058191"
                     /note="monocyte to macrophage differentiation factor;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 1 Protein"
                     /db_xref="GeneID:108058191"
     CDS             301..1230
                     /gene="LOC108058191"
                     /codon_start=1
                     /product="monocyte to macrophage differentiation factor"
                     /protein_id="XP_016998272.2"
                     /db_xref="GeneID:108058191"
                     /translation="MSTSEGSGPRIRNGNGDADGNLSLMQDLQNKYAFLENLFSKFWK
                     TIIKSNSNLKLQLRNVKWKNAKAKPGCAYQPTEIEQVANVITHGIWILPAVFAAIKLF
                     ERSSSASQYLVSWVYGGALCMLFTVSTFFHCSCYCAEHKPPRNVKAWPNLGWQTTYQG
                     LKNVLHRCDRAMIYVFIAGSYFPWLTLENTDHSAILFCMEWVIWLMAGVGIAYQQLFH
                     ERYKCLETFFYLVMGLGPALVVVFTGHHFHGMLQLKFGGAFYILGIVFFKADGLIPMA
                     HAIWHLFVVLAAGCHYYAILVNLYPGEGAIVEP"
     misc_feature    535..1197
                     /gene="LOC108058191"
                     /note="channel protein, hemolysin III family; Region:
                     hlyIII; TIGR01065"
                     /db_xref="CDD:273425"
     polyA_site      2114
                     /gene="LOC108058191"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 aacggcgggc tatcgatgtt acatcgccgt tcgcccaccg ctaagaaatc cgccgaaata
       61 aataaaaaaa aagcggacgc caagtccaag ttcccccgtt ccccggatgc agtgcagcga
      121 gtcttgggtc cctgagaatc ctgcgtgggc ctgggattcc catttcgatt ccgaatccgc
      181 gtacgcccat ctgcggatcc tggtctcggc ctcagcatcc gcatccgcat cctttgccgc
      241 cttccatccc gcacagcatc cgcattcgaa tccgcggccc caagaagacg tctgtccacg
      301 atgagcacca gcgaagggag tggccctcgg attcggaatg gaaatggtga cgcggatggg
      361 aacctcagcc tgatgcagga cctccagaac aagtacgcct tcctcgagaa tcttttcagc
      421 aagttctgga agaccatcat caagtcgaac tccaatctca agctgcagct gcgcaatgtc
      481 aagtggaaga atgccaaggc gaagcccggt tgtgcctacc agccaacgga gattgagcag
      541 gtggccaatg tgattactca tgggatttgg atactgcccg ccgtgtttgc ggccataaag
      601 ctcttcgaac gctcatccag tgccagccag tatttggttt cgtgggtcta tggcggtgcc
      661 ctctgcatgc tcttcacggt ctcaaccttc ttccactgct cctgctactg cgccgagcac
      721 aaacccccga ggaatgtcaa ggcctggccc aatctcggct ggcagacgac ttaccagggc
      781 ctgaagaacg tactccatcg ctgcgacagg gccatgatct atgtgttcat cgccggctcc
      841 tacttcccct ggctcacgct ggagaacacc gaccattcgg ccatactctt ctgcatggaa
      901 tgggtcatct ggctgatggc gggcgtgggc atagcctacc agcagctgtt ccacgagcgc
      961 tacaagtgcc tggagacgtt cttctacctg gtgatgggcc tgggaccggc tctagtggtc
     1021 gtgttcaccg ggcaccactt ccatgggatg ctgcagctga agttcggcgg cgccttctac
     1081 atcctgggca tcgtgttctt caaggccgac ggcctgatac cgatggccca tgccatttgg
     1141 catctgttcg tggtgctggc cgccggctgt cactactatg ccatcctggt gaatctatat
     1201 cccggcgagg gagccatcgt cgaaccgtga gaatgacaag gcagggaacg cagcgaattt
     1261 ttagatctta gagtacttaa cgtaacaggg attcgatttt gtcagccatg tgtaaaaggt
     1321 attcctacga tgatgatgat gatgtacccg attctctgct ccacaattag ccaaattttt
     1381 tttttccaac gagcgagtac gattagaata gtagccatta gcattacgaa ctaaactaaa
     1441 ctaaactaaa tcgaaacgaa acgattcatg tgatcagtat ctgcggtctt gccaaagatt
     1501 caaattgtgc gagtgctcac gtctctctcc ctctctatct atcttgatat tattatctat
     1561 attcctatat atactatata tatatttata ttgaccatgt accagctccc cgtttggcca
     1621 tgtgtttctc aaaaaaagac tttgatccgt actcaaaagg cgaaacgaca caaagaaagt
     1681 aaaattgtac aaatatccga aagtttacaa cctgaattta atcgcccacc ccgcgccttt
     1741 tgaacattag aagcccgcct agcctgcatt acattataca tgtttataca gattatacag
     1801 atatatacaa tataccattt accatatacc atatacagat ctagttctag gagccgatca
     1861 gcgagtccag cccctttggc cagtttcatc gcttagctca gggactactc gatgtgttcg
     1921 cagatactga agaaggtgac gactatatat atatatatac gcttgatatt ttggggcctg
     1981 gctcgcgatc ggcgaacggt tatattgctc tcgtggttat ttctggtgca gctcgattag
     2041 ttttaaagcg ggattctagg catgtatcct tagaactcct tagatgcttc aataaacggt
     2101 ttatttcgaa atga