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LOCUS XM_017142770 3585 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017142770 VERSION XM_017142770.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017142770.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..3585 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..3585 /gene="LOC108058182" /note="mucin-2; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108058182" CDS 374..3100 /gene="LOC108058182" /codon_start=1 /product="mucin-2" /protein_id="XP_016998259.2" /db_xref="GeneID:108058182" /translation="MALHRGSLGPLTLMLLTSWLAVSTSQSVSSLGRSALPAQPADHL VPPPLPIPQRLSHAGAGSPAVPAVSSTPISIPEASGFMTRVARWFGLGGGNQSPKDQQ LSATNSLSYAYPKPVASGFDAGGKPCSLCNKYPWVPMVGQQVNNQLLQVQQQQLKHLP QQQQQQQHLQHATWQVQQQPVAQASQQRQRAVQFRPSPSGSNVFLPLAVPLPPLYNAQ PFRPVVQQQQVVQPVKLQENVVAQSEVRPVVPVVVATPPPPASTSSFEIVQSHQVTDF VTSVEYPATFVQSHAIDLGSGAQQEEEVPSSEPPVQISTVRYQLEDLSSGQVHQHLPA SQLLTELGHFAETTTQSPPPPPADNYPAASSQQQLQQEQEQDSFYYAEQFQEETSTLV YSTTTEMPTTTTTGVPATSSPAIELNNHLIQSHAQNYRQGIGRGRETPKRLLDSPINH LGGGGAAGRPFTRDPADLSFRLSQVYTPTVGPPTPTSTYGAIDASGQFAGMAPPPQPQ QVIIPYTTKQRPRPFESWTPSKQQHQNHHHHNDLEEEPHEQQESKLATATVTAPPSRR TTKYLTKILASNLRELLKRERETKTKTRPPPPGHQGFGVDISRLQHNIDGWTEQEYNS LSHRPSTPTIRGRSKHIPSEYLTTTTTTPAPEIPKQSKQSRQSKTTRGEGFELGGAPL PTDAGDLSTSINNLEQLHLLGGFQPIEDNRLHFDYHDLQQQRLRSTAAMTTQSPVTTA TSPTTTTSTTTTTVVAPLYVRSTPAPKELWKQAQVAILPQTNEKVYVVTPQPQRQQEH GDRERERDRDRHVASGSAPRPVYQTPAPRFPRMRPTPAGEVKSATPTSSSQLRNYTPD IFGLMGLSSYVPAEPVEIIDGNSKVITIVTAAPTAAALQRPTARSTISPSPR" ORIGIN 1 gggcgcctgc gcgcatgtgc agtcagagtt ttttccatcg atcgttcgtc gtcggttctt 61 tgcggttccg aaatccagcc ggagatataa atatatattc ggtgatatat gcgtgtgtac 121 agcatccctg cctttttggt gataaaagtg aaattcagtg cccaagaagt tgccaaaaaa 181 ataaaaataa aatcacaatc aaattttttg tttcgctttt tgttcgagtg ccgagtgatt 241 cagttcaata caaaatccca gaaattcgta ggaatttcac aggtagccag cggatttacc 301 taaacgcgcc gaggatcaag aacatcaatc aggagtaggg tgatttgtat tacctagaac 361 tcatttgtca gaaatggctc tccatcgagg atctctgggt cctctcacct tgatgcttct 421 cacctcctgg ctggcggtat ccacatcgca gtcggtttcc tccctgggca gatcggcatt 481 gcccgcccag ccggcggatc acctggttcc cccgccactg cccattcccc agcggctctc 541 ccatgccgga gcaggatctc cagcggttcc tgcagtctcc tccactccaa tttccattcc 601 cgaagcctcc ggattcatga cccgcgtggc cagatggttt ggcctgggtg gaggcaatca 661 atcgccgaag gatcagcagc tgagtgccac caattcgctg agttatgctt atccaaagcc 721 cgttgcctcg ggtttcgatg ccggtggcaa gccgtgcagt ttgtgcaaca agtatccctg 781 ggtgccgatg gtgggtcagc aggtgaacaa ccagctgttg caagtgcagc agcagcaact 841 caagcatctc ccgcagcaac agcaacagca gcagcacctg caacatgcaa catggcaggt 901 gcaacagcag ccagtggctc aggcatccca gcaacgccag cgggcggtgc agttccgacc 961 cagtccatcc ggatcgaatg tcttcctgcc gctggcggtg ccactgccac cactgtacaa 1021 tgcccagcca ttccgtccgg tggtgcagca gcagcaggtg gtgcaaccag tgaagcttca 1081 ggagaacgtg gtggcccaat cggaggtgcg acccgtggtg cccgttgtgg ttgcaactcc 1141 tccaccgccg gccagcacct ccagcttcga gattgtccag agccaccagg tgacggactt 1201 tgtgacctcc gtcgaatacc cggccacctt tgtccagtcg catgccatcg atctgggatc 1261 aggtgctcag caggaggagg aggtgccctc ctccgagcct ccagtgcaga tcagtacggt 1321 tcgctatcag ctggaggatt tgagcagtgg tcaggtgcat cagcatttgc ccgcctccca 1381 gctgctcacc gagttgggtc actttgcgga gacgacgacg cagtcaccac caccaccacc 1441 ggcggataat tatccagctg cctcgtcgca acagcaattg cagcaggagc aggaacagga 1501 ttccttctac tatgccgagc aatttcagga ggagaccagc actttggtct acagcaccac 1561 cacggagatg cccaccacca ccaccactgg ggttccggcc acatcctcac ctgccatcga 1621 gctaaataat cacctaatcc aatcgcatgc ccagaattac cgtcagggga ttggacgagg 1681 cagggaaacc cccaagcgtc tgctggactc acccatcaat cacttgggag gaggaggagc 1741 agcagggaga cccttcaccc gggatcccgc tgatctcagc ttccggctga gtcaggtgta 1801 cacgcccact gtgggcccac ccacgcccac ttccacctac ggagccatcg atgccagcgg 1861 tcagttcgcc ggaatggcac caccaccgca accacaacag gtgatcattc cctacacgac 1921 caagcagcgg ccacgcccct tcgagagctg gacgccctcg aagcagcagc accagaatca 1981 tcatcatcac aacgatctcg aggaggagcc acacgagcag caggaatcca agctggccac 2041 ggccacggtg acggcaccac catcgcgacg caccaccaaa tatctgacca agattctggc 2101 ctccaatctg agggagctgc tcaagcggga gagggagacc aagaccaaga caaggccacc 2161 accacctggc catcaaggat tcggagtgga catctcgcgg ctgcagcaca acatcgatgg 2221 ctggacggag caggagtaca actcgctgtc gcatcgaccc agcacgccca caattcgcgg 2281 aaggagcaag cacataccct ccgagtacct gaccaccacc accaccacac cagcaccaga 2341 gattccgaag caatcgaagc aatcgaggca atcgaagacc acgcggggcg agggcttcga 2401 actgggtggt gctccgctgc ccacagatgc cggtgatttg tccacctcca tcaacaatct 2461 ggagcaactg catctgctgg gcggcttcca gcccatcgag gacaaccggc tgcatttcga 2521 ttaccacgat cttcagcagc agcgactgag atccaccgcg gccatgacca cccagagtcc 2581 agtcaccacc gcaacatcac ccaccaccac caccagcact acgacaacca ctgtggtggc 2641 tccactttac gtgcgcagca ctccggcgcc caaggagctg tggaaacagg cccaggtggc 2701 catcctgccg cagaccaacg agaaggtcta cgtggtcacg ccgcagccgc agcggcagca 2761 ggagcacggg gatcgggaaa gggaaaggga tcgggatcgt catgtggcct ccggttcggc 2821 gccaagacca gtttaccaga cgccagcacc gcgctttcca cgcatgcgac ctactccagc 2881 tggcgaagtg aagtcggcca cgcccaccag ttcctcgcag ctgcgcaact atacgccgga 2941 tattttcggg ctgatgggat tgtcctctta tgtgcccgct gagcccgtgg agatcatcga 3001 cggaaattcc aaagtcatca cgattgtgac agcagcaccg acggcggctg cacttcagcg 3061 accgacagcg aggtccacga tttctccgtc gcccagatag aggtcgagcc aaggtcacga 3121 tctcccccca ccccccttta accccctcct gttgtaatat atttccccca aaggctcccg 3181 atgatcgtaa aaaggaccga ggattccaca tagttataga gcaaagtctt tggaagtgct 3241 acgttaggag agagatcccg aatcaaagtt agagtatttt cgcatttggt agctttataa 3301 acacatagac gatgaagagg accacgagta tccaaagaag tggagttacc cctagaataa 3361 actatgtatt cgcaaaagga tttgtattct ttttttttgt tttttttttt gttccggctc 3421 tcccttcgct agttttagtt ctatgtataa atatatctat tatatctatt tcaatctatc 3481 cgaagagtcg gttgtcgagc ggttgacaac gttataatcg atggggaacc aaaatgtagc 3541 aaaaattaac aaacgaacga tcaaataaaa taaaataaat caaag