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LOCUS XM_017142746 4500 bp mRNA linear INV 09-DEC-2024 18B (RhoGAP18B), transcript variant X1, mRNA. ACCESSION XM_017142746 VERSION XM_017142746.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017142746.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..4500 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..4500 /gene="RhoGAP18B" /note="Rho GTPase activating protein at 18B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108058166" CDS 77..3955 /gene="RhoGAP18B" /codon_start=1 /product="uncharacterized protein RhoGAP18B isoform X1" /protein_id="XP_016998235.2" /db_xref="GeneID:108058166" /translation="MPEQRKDINDNLRMDTHIYENLPSASLSPSPSPKGQLNLELRKY FPGETIYENLCRGCGYGVFAAQGRYCHFCQCIVSGGVVSPPPPAPPSPPLSPPTFAER ESNIYENICDLCRGIYSDNERCQCQRSTATPTQTPTPTTPSTPPTKVKSRSLLGYSRS SAATLTRLFGSLKQLNRSSSLQRRIFQGSRTPTSNGGSLEIIHNVDEVFRTRETFDLQ RICELKLQQQQQQQQLKSSQSDQHIYGRVREPEQEKRERKKPRVSRIRLLQDERAAAS ASSLYLNESICQWMTSLRRQVHHYEEGAWQQPKSVPARREHLSGEEHTVTLRRTKEED EQSLIKDFKRKLQLQREALPKEELDKEQRRCAITAEFVNDYLSALSEENTQQVALIKG EPERESASALPQNSLLRLMQSLARSASLHVCVRGFLTAYDKSFSQWLWQQQQHKHKPI NGYRRRERARDSVEWRLLLFFGFNDRRAPSERAISVSPVSPVSPEISKSDDVCAASRR RAIRTTRRTKSVGEEEGEGVSGGESSTNTNRSKNNNKHNNNDNIKALMAAPKPNGEAE RPTSNNCNNNNNNCSSSNNNNNHSDDNETGNNNNNNGNNTSSCNVSEQQQQQQITQNC VIKVRRPAPKVPVRNPSTSLSNPRQTDEAMAKEKEQPDAEEDDEESIYQPIWQFKTLE PADQVVIEGALPAQDEDDEEEEDEDEEDDDEEEEEDLDDYGESLPSDPDADVLALQAA AVFAAGVRHKLSTSTLTKRSKLMLPTPLPSPTASMDQGAWETDMEFMYSRENKDADET LSLGSTVTNSTATMGSISSNGSSNARLLPPKDQDLIVSSQPAAEIVPLVHPILRNICI FYSQTEPKKYSAIFYDYHRSHVHQRFMTRIRRPAPPPPVSQVTPMTPLVTPTRNDDSG CSCEAEDQDQDLQLRPRSMAIPQPLKEEWERAVLAAGAVGGKRGVAPRAGRKLRVRSN ARLLLTDSVLAWRETLQDFNCCEDEEDMIVPVTDILRAQQIQEDNEVQQTQQTTILQR FKSVSIGNLLDLPGEDDKKSIKNRMRMKFAVNSNVFRINRSPKSEKKSRPRRGQVNSL YLDEQKYPLFAAPLNSLELNMTDHPNVPRFVVDICAYIEQPECIEQDGLYRASGNKVL VDELRKKLTHLYDPRWLHTDDIHTLTSLHKQFFRELSAPLITQEAYERLGRSLNDDAA IERMSLAFDDMPEPNRSTLRFLIKHLTRVAAASASNRMPSTNLAIVWGPCLLSANQIQ LDIGRMNMLAKVLIENYDRIFHPDNERLVC" misc_feature 3422..3856 /gene="RhoGAP18B" /note="RhoGAP domain; Region: RhoGAP; pfam00620" /db_xref="CDD:459875" polyA_site 4500 /gene="RhoGAP18B" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccataatttt ctcacttaat attaaattat gacatgacgc agcggcgata aaagaaagta 61 gggagaaaga ggagaaatgc cggagcaacg aaaggacata aacgataacc ttagaatgga 121 tacgcacatt tacgagaatt tgccctccgc ctccctttcc ccctccccct cccccaaagg 181 tcagctcaat ttggagttgc gaaagtattt tccgggcgaa acgatctacg agaatttgtg 241 ccgtggctgc ggctacgggg tttttgccgc ccaaggacgc tactgtcatt tctgtcagtg 301 catcgtgagc ggtggggtgg ttagtccgcc gcctcctgcg cccccctcac cgcccctttc 361 gccgcccact ttcgcggaga gagagagcaa tatctacgag aatatctgcg atttgtgccg 421 cggcatttac agtgacaacg agcggtgtca gtgtcaaagg tcaacagcca cacctactca 481 aacccccaca cccacaacac cttccacccc acccaccaag gtcaagtcgc gctctcttct 541 gggctactcc cggtccagtg cggcgacctt gacccgtctc ttcggctctc ttaagcagct 601 gaaccgctct tcgtcgctgc agcgccgcat cttccaggga tcgaggacac cgacctccaa 661 cggtggctcc ctggagatca tccacaacgt agacgaggtc ttccgcaccc gagagacctt 721 tgacctccag cgcatctgcg aactcaagct gcagcagcag cagcagcagc agcaacttaa 781 gagcagccag agcgatcagc acatctacgg tcgcgtaaga gagcccgagc aagagaagag 841 agagcgcaag aagccgcgtg tctctcgcat tcgcctgctg caggacgaaa gagcggccgc 901 ctccgcatca tccttgtatc tcaacgagag catctgccag tggatgacgt cactgcgcag 961 gcaggtgcac cactacgagg agggggcgtg gcagcagccc aagagtgtac cggcgcgaag 1021 agagcatctc agcggcgaag agcacacggt cacgctgcga aggaccaagg aagaggatga 1081 gcagagcctg atcaaggact ttaagagaaa gctgcagctg cagagagagg cgctgccgaa 1141 ggaagagttg gataaagagc agcgacgatg cgccatcaca gccgagtttg tgaatgacta 1201 cctaagcgct cttagcgaag agaacacgca acaagtggct ttgattaaag gggaaccaga 1261 aagagagagt gctagtgcgc tgccccaaaa ctctctctta cgcctaatgc agagcctcgc 1321 tcgctccgcc agcctgcacg tgtgtgtgcg tggctttctc accgcctatg acaaatcgtt 1381 cagccagtgg ttgtggcagc aacaacaaca caaacacaaa ccgatcaacg gttatcgccg 1441 ccgcgagaga gcgcgtgact cagttgaatg gcgcctgctt ctcttcttcg gcttcaacga 1501 tcgccgagct cccagcgaac gggcgatttc agtttcgccc gtttcgccag tttcgccgga 1561 gatttcaaaa agtgacgacg tgtgtgctgc atcgcggcgt cgcgcgattc gaactacgag 1621 gcgaactaag agcgtgggag aggaagaggg agagggtgta agcgggggcg agagctccac 1681 caacaccaat aggagcaaaa acaataataa gcataacaac aacgacaata tcaaagcttt 1741 gatggcggcg ccaaagccaa acggcgaggc agagcgcccc acaagcaaca actgcaacaa 1801 taacaacaac aattgcagca gcagcaacaa caacaacaat cacagcgatg acaatgaaac 1861 cggcaacaac aacaacaaca acggcaacaa caccagcagt tgcaatgtca gcgagcaaca 1921 acaacaacag caaatcacac agaattgcgt gataaaagtt cggcgaccgg cgcccaaagt 1981 tccggttcgt aatcccagca cttccttgag caatccccgc cagacggacg aggcgatggc 2041 caaggagaag gagcaaccag atgccgagga ggatgatgag gaatccattt accaacccat 2101 ttggcagttc aagaccctgg aacccgccga tcaggtggtc atcgaaggtg ctcttccagc 2161 acaggacgaa gatgatgagg aggaggagga tgaagatgag gaggacgacg acgaggagga 2221 ggaggaggat ctggacgact acggcgagtc gctgccctcg gatcccgatg ccgatgtgct 2281 ggccctccag gcggcggccg tctttgccgc cggagtccgg cacaagctat ccacctcgac 2341 gctgaccaag cgctccaagc tgatgctgcc cacgcccctg ccctcgccca ccgcctccat 2401 ggaccagggg gcctgggaga cggacatgga gttcatgtac tcgcgggaga acaaggatgc 2461 cgatgaaaca ctcagcttgg gcagcacggt gacgaatagc acggctacga tgggttccat 2521 cagtagcaac ggcagcagca acgccaggct gctgccacca aaggatcagg atctgatagt 2581 cagttcccag ccagcggcgg aaattgtgcc cctcgtgcat ccgatcctca ggaacatctg 2641 catcttctac agccaaacgg agcccaagaa gtacagcgct atattctacg actaccatcg 2701 atcgcatgtc catcagcgtt tcatgacccg cattcgtcga ccggcgccac cgccacccgt 2761 ctcacaggtg accccgatga ccccgttggt gaccccaacc cgcaacgatg acagtggctg 2821 cagttgcgag gcggaggatc aggatcagga tcttcaactc cgcccccgat ctatggccat 2881 cccgcaaccg ctcaaggagg agtgggagcg ggccgtgctg gccgcggggg cggtgggcgg 2941 caagaggggc gtggctccgc gggcgggacg caaactgagg gtccgctcca atgcgaggct 3001 gctgctcacg gattcggtgc tggcgtggcg ggaaacgctg caggatttca actgctgcga 3061 ggacgaagag gacatgattg tgccagtgac tgacattctg cgggcgcagc agatccagga 3121 ggacaatgag gtgcagcaga cgcagcagac cacgattctc cagcgcttca agagcgtctc 3181 catcgggaac ctgctggatc tgccgggcga ggatgacaag aagtccatca agaatcgcat 3241 gcgaatgaag ttcgccgtta atagcaatgt gtttcgcatc aaccgttcgc caaagagcga 3301 gaagaagtcg cgtccacgtc gtggccaggt gaacagcctg tatctcgacg agcagaagta 3361 tccactcttt gcggcgcccc tcaacagcct ggagctcaac atgaccgacc atccgaatgt 3421 ccccagattc gtggtcgaca tttgtgccta catcgagcag ccggagtgca tcgaacagga 3481 tggtctgtac cgggcatccg gcaataaggt cctggtcgac gagctgcgca agaagctgac 3541 ccacctgtac gatccccgct ggctgcacac ggacgacatc cacacgctga ccagcctgca 3601 caagcagttc ttccgcgagc tctccgctcc gctgatcacc caggaggcct acgagcgcct 3661 gggccgcagc ctcaacgacg acgcggccat cgagcggatg agcctggcct ttgacgacat 3721 gcccgagccg aatcgctcca cactgcgctt cctcatcaag cacttgacca gagtggccgc 3781 tgccagcgct tcgaatcgca tgccgtccac caatctggcc atcgtttggg gtccctgtct 3841 gctcagcgcc aatcagatcc agctggacat tggacgcatg aacatgctgg ccaaggtgct 3901 gatcgagaac tacgatcgca tctttcaccc ggacaacgag cgtctcgttt gctagaccgt 3961 cgccggcatt cccgccccgc ccctccgctg ccacgcccac atctccacac atcacatcgc 4021 ctgcagaacc agcagcatcg atatataagt gcctcagaca tcaacaaaac atcacccctt 4081 ctcaccctat gataatacgt tttttttaaa atgttttttt tgtcagcttt aattctatgt 4141 tttccttcgg taattttaat attttaatta ctttatttat tcattggaag tgggaactcg 4201 gctagtcggg cccatcaaga aaatacttac caaaaagaca gtagactaag ttgtaacaag 4261 aaccgcaaga aaataatcta gaaactacga actttgtggc ggtacagtga gcactgcctg 4321 cggccaaccc aataacatga cggaatatta ttattttttt ttttgtttgt gacatcatac 4381 atgagatgtg atattcgctg caaattgcaa agcgtgaata taatttgtat ttatataata 4441 tatattaatt aataaaccat atgacatata cgaataaagt ccagtacagt agataggcta