PREDICTED: Drosophila takahashii arginase (arg), transcript variant

LOCUS       XM_017142729            1290 bp    mRNA    linear   INV 09-DEC-2024
            X1, mRNA.
ACCESSION   XM_017142729
VERSION     XM_017142729.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017142729.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1290
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1290
                     /gene="arg"
                     /note="arginase; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 Proteins"
                     /db_xref="GeneID:108058163"
     CDS             120..1166
                     /gene="arg"
                     /codon_start=1
                     /product="arginase-1 isoform X1"
                     /protein_id="XP_016998218.1"
                     /db_xref="GeneID:108058163"
                     /translation="MWWSRKLASRCLRLHRAKSTASSEPEQTLGIIGVPFAKGQGKQG
                     VELAPDLLRQSSLRQVLQSSHDGLVIRDYGNLQYAVDEPLLQQQRVHYHHIRNYADFM
                     ACNRALIEQVKLMLAENSQFLAIGGDHAIGFGSVAGHLQHTPNLSLVWIDAHADINLH
                     STSQSGNIHGMPVSFLLEQLRTTWQHAGLQDIAPNCLPKDQLVYIGLRDIDPYEAFIL
                     NKVGIRYYAMDTIDRVGVPKIIEMTLDALDPQNKIHVSFDIDALDSNVAPSTGTAVRG
                     GLTLREGISIVEALRDTKRVQGVDLVEINPKLGSERDVRTTVESGLEILKSMFGYRRS
                     GKWSNIDTGILGSD"
     misc_feature    204..1103
                     /gene="arg"
                     /note="Arginase family; Region: Arginase; cd09989"
                     /db_xref="CDD:212515"
     misc_feature    order(504..506,573..575,579..581,585..587,591..593,
                     624..629,750..752,759..761,891..893,897..899,1026..1028)
                     /gene="arg"
                     /note="active site"
                     /db_xref="CDD:212515"
     misc_feature    order(741..743,747..749,762..764,771..776,798..806,
                     810..821,828..833,840..842,942..965,981..983)
                     /gene="arg"
                     /note="oligomer interface [polypeptide binding]; other
                     site"
                     /db_xref="CDD:212515"
     polyA_site      1290
                     /gene="arg"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 tcgtgctcat tgtcgctgtc gtctccactc caccactcag ttgcggatct tccagcgttg
       61 cgagcagagc gaaacagcat agaacagaac cgagttcaat acccaatcgc atcccaaata
      121 tgtggtggag ccgtaagtta gcctcaaggt gtctccgcct ccatcgggcc aagagcaccg
      181 cctccagcga accggagcaa acgctgggca tcattggagt gcccttcgcc aagggacagg
      241 gcaaacaggg cgtggagctc gctccggatc tcctccggca gagcagcctg cgtcaggtgc
      301 tgcagagcag tcatgatggc ctggtgatac gggactacgg taatctgcag tatgccgtgg
      361 acgagcccct tctccagcag cagcgggtgc actaccacca catccggaac tacgcggact
      421 ttatggcctg caatcgggct ctgatcgagc aggtgaagct gatgctggcg gagaactcgc
      481 agttcctggc cattggcggc gatcatgcga ttgggttcgg atcggtggcc ggtcacctgc
      541 agcacacgcc aaatttatcg ctggtctgga tcgatgcgca tgcggacatc aatctgcata
      601 gcacctcgca gtcgggcaac atccatggga tgcccgtgtc cttcctcctg gaacaactcc
      661 gtaccacctg gcagcacgcc ggcctccagg acatcgcgcc caactgtttg cccaaggatc
      721 agttggttta catcggactg cgggacattg acccctacga ggcgttcata ttgaacaaag
      781 tcgggatacg ctactatgcg atggatacca tcgaccgtgt gggcgtgccc aagatcatcg
      841 agatgaccct ggacgccctc gatccgcaga acaagatcca cgtgagcttc gacatcgacg
      901 ccctggacag caacgtggcg cccagcaccg ggaccgccgt gcgcggcggg ctcaccctgc
      961 gcgagggcat cagcatcgtg gaggcgctga gggacaccaa gcgggtgcag ggcgtcgacc
     1021 tggtggagat caacccgaag ctgggcagcg agcgcgacgt gcgcaccacc gtggagtccg
     1081 gcctggagat cctgaagagc atgttcggct accggaggtc cggcaagtgg agcaacatcg
     1141 acactgggat cctgggcagc gattgagcca aggaaaacat acagttcttg tgcttatcaa
     1201 tatttatgta caacattctt gccatatttg tgtgtgcttt ttttttcgta tcttaatgaa
     1261 agaataaaca agaaattagt ttaaagagaa