PREDICTED: Drosophila takahashii twiggy (tgy), mRNA.

LOCUS       XM_017142700            1292 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017142700
VERSION     XM_017142700.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017142700.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1292
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1292
                     /gene="tgy"
                     /note="twiggy; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 Protein"
                     /db_xref="GeneID:108058146"
     CDS             1..1077
                     /gene="tgy"
                     /codon_start=1
                     /product="glycoprotein-N-acetylgalactosamine
                     3-beta-galactosyltransferase 1"
                     /protein_id="XP_016998189.2"
                     /db_xref="GeneID:108058146"
                     /translation="MAGEYITLESPSVYPAGGKLRPARRLSTNHLVLLTLLVGSSLII
                     TYAYWDVMMLTAGALPLARIDPTGLSNETLAEKLYREVRILCWVLTTPKYHKSRAVHV
                     LRTWGKRCNKIYFMTSEPDDELPTVVLTKPDRYEVLWGKTKEAFTHIHENMRDEADWF
                     IKADDDTYVFLENLRYMLYPYSPEIPIYFGFNYKMIGNHQKNESYMSGGSGYVLSREA
                     LKIFAEGLNDTAKCRQQDDSAEDVEMGKCLFNLGVKAGDSRDEQLRNRFYPIAPFGAL
                     LSGNVGIDFWLYKYAYYNARSCMDCLSEYPVAFHYVNSKQLYVYEYFNYQLQLAGRQQ
                     VAERLPERIREEDLVIPESDNPVT"
     misc_feature    262..>765
                     /gene="tgy"
                     /note="Galactosyltransferase; Region: Galactosyl_T;
                     cl21608"
                     /db_xref="CDD:473923"
     polyA_site      1292
                     /gene="tgy"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 atggccggcg agtatatcac actggagagt ccgtcagttt acccggcggg cgggaaactc
       61 cgtccggctc ggcgactttc caccaatcac ctggttctgc tgaccctcct ggtgggcagt
      121 tcgctaatca tcacctacgc ctactgggat gtgatgatgc tgaccgccgg cgctttgccc
      181 ttggccagaa tcgatcccac tggactgtcc aacgaaacgc tggccgagaa gctctaccgg
      241 gaggtgagga tcctgtgctg ggtgctcacc acacctaagt atcacaaatc gagggccgtc
      301 cacgtgctgc gcacctgggg caagcgctgc aacaagatct acttcatgac ctcggagccg
      361 gatgacgagc tgcccaccgt ggtgctgacc aagccggacc gctacgaggt cctctggggc
      421 aagaccaagg aggccttcac ccacatccac gaaaatatgc gcgacgaggc cgattggttc
      481 atcaaggcgg atgatgacac ctacgtattt ttggagaatt tgcgctacat gctctacccc
      541 tattccccgg aaatccctat ttattttgga ttcaattaca agatgatcgg caatcaccag
      601 aagaacgagt cgtacatgtc cgggggcagt ggctacgtgc tgagccgcga ggctctgaag
      661 atcttcgccg agggcctcaa cgacaccgcc aagtgccgcc agcaggacga ttccgccgag
      721 gacgtggaga tgggcaaatg cctgtttaat ctcggcgtta aggccggcga ttcccgggac
      781 gagcagttgc gcaaccgatt ctatccgatt gcccccttcg gagcgcttct ttcgggcaac
      841 gtgggcatag acttttggct ctacaaatac gcctactaca acgcaagatc gtgcatggac
      901 tgcctgtccg agtacccggt ggccttccac tatgtgaaca gcaagcagct gtacgtgtac
      961 gagtacttca actaccagct ccagttggcc ggaaggcagc aggtggcgga gcggctgccc
     1021 gaaaggatca gggaggagga cctggtcatc cccgagagcg acaatccggt gacctagcag
     1081 caggcgactc agccattggc cctctccgcc agccacaatc tctacttttt tcatctccct
     1141 ttttttctcc cttttttttt tgtttgcatg cttatcgtat atttaatata ttatgggtat
     1201 aaggcggacg tgccaaggca gccagatgct gtcctgttgc gactcctcga cttcgtcctc
     1261 gtccttgccc gatccacgtc ctagtttatc ta