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LOCUS XM_017142129 2702 bp mRNA linear INV 09-DEC-2024 p115 (p115), mRNA. ACCESSION XM_017142129 VERSION XM_017142129.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017142129.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2702 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2702 /gene="p115" /note="General vesicular transport factor p115; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108057730" CDS 90..2573 /gene="p115" /codon_start=1 /product="general vesicular transport factor p115" /protein_id="XP_016997618.2" /db_xref="GeneID:108057730" /translation="MEFLKSGIKTVLGGTEPGQQPSAAETVEKLVDRVYSSTLLEDRR DACRALKALSRKYRIEVGAQGMPPLVQVLQNDGQDAEIISYALDTLCNVVTSEEFDEE ADNPTVSVNVGEQFTEMFIKTPEHVTVVMGYLDEYDFRVRRAAIQLITSLISNKTREL QDLVLVSPMGVSKLMDLLTDSREVIRNDVLLLLIELTKGNSNIQKIVAFENAFDRLFE IVREEGCSDGGIVVEDCLILLLNLLKNNSSNQQFFKEGSYIQRLAPMFQLSPDAEEAG WSPQKVSNFHCLLQVVRALVTPSNQQQVVAACQRVMQKSRLLHALCEILMSSGVPADI LTETINAVAEVVRGDRDNQDELGRVMAPSSPPRPAIVVLLMSMINEKQLLALRCAVLY CFECFLYRNADGQRAVVQTLLPSSASDVSALSTGQLLCTGLFSSDALANWFSAVALMH SLVENVALKEELLRVLLATPGGQRPITLLEQCSNLMQQERYRLQSKVGLLMLLSLWLA HCPGAVKALLETQGTMAYLTAQLCSNEHDEREFLVQGMCAFLMGLCIQFNDNSLPGQK REDISQLIIKRIGQESFCSKLAEVSRHEAYSRACKQAQIRAKSAGELLLDYEYCKLYK GLEALIAKLVSGFDVDGIELTELTLSSEASALVSQYKGIIRGMDGQIQALQQSSKELE QQNAELKEKLGEEQSLRAQLSDQNTLLKAQLGASAGQESEGTGAANEEELNAARYQAN MYFAENIRLTKELETLRQQFSGEKQRADAAQESLAATQKDQEDLLELLADQEAKLTRY EEAAAAAATSLPAANEAEESPIPSGTASR" misc_feature 912..1091 /gene="p115" /note="Armadillo tether-repeat of vescicular transport factor; Region: Arm_vescicular; pfam18770" /db_xref="CDD:465861" misc_feature 1170..1985 /gene="p115" /note="Uso1 / p115 like vesicle tethering protein, head region; Region: Uso1_p115_head; pfam04869" /db_xref="CDD:461460" misc_feature 2157..>2489 /gene="p115" /note="Uso1 / p115 like vesicle tethering protein, C terminal region; Region: Uso1_p115_C; pfam04871" /db_xref="CDD:461461" polyA_site 2702 /gene="p115" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ccgcccgtca attgttttca tgaattgacg tgtcgtgtcg aatgcgaaaa aacgcagaat 61 agaccgtaaa cagaacagcg tagactcgca tggagttcct gaagagtggc ataaagacgg 121 tgctgggcgg cacggagccg ggccagcagc cgagtgccgc cgagacggtg gagaagctgg 181 tggaccgcgt ttactcctcg acgctcctgg aggatcgccg cgatgcctgc cgagcactga 241 aggccctctc ccgcaagtac cgcatcgagg tgggcgccca ggggatgccg ccgctggtcc 301 aggtgctcca gaacgatggc caggatgcgg agatcattag ctatgctttg gacacactgt 361 gcaacgtggt gaccagcgag gagttcgacg aggaggccga caatcccacc gtttcggtga 421 atgtgggcga gcagttcacg gagatgttca tcaagacgcc ggagcatgtg accgtggtga 481 tgggctacct ggacgagtac gatttccggg tgcgccgtgc cgccattcag ctaataacat 541 ccctaatctc gaacaagacg cgggagctgc aggatctggt cctggtcagc ccgatgggcg 601 tgtccaagct gatggatctg ctgaccgaca gccgcgaggt gatccgcaac gatgtgctgc 661 tgcttctgat cgaactgacc aagggcaact cgaatatcca gaagattgtg gccttcgaga 721 atgccttcga tcgtttgttc gagattgtcc gcgaggaggg ctgctcggat ggcggcattg 781 tggtcgagga ctgcctcatc ctgctgctga acctcctcaa gaacaactcg agcaatcagc 841 agttcttcaa ggagggcagc tacatccagc gtttggcccc gatgttccaa ctttcgccgg 901 atgccgagga agctggctgg tcgccgcaga aggtctccaa cttccactgc ctgctgcagg 961 tcgtccgtgc tctggtcacg cccagcaatc agcagcaggt ggtggccgcc tgccagcggg 1021 tgatgcaaaa atcccgcctg cttcacgccc tctgcgagat cctcatgagc agcggcgtgc 1081 cggcggacat actcacggag accatcaatg cggtggccga ggtggtgcgc ggcgatcgcg 1141 acaatcagga tgaattgggt cgggttatgg cgcccagcag tccacccaga ccggccattg 1201 tggtgctcct aatgtccatg atcaacgaga aacagctgct cgctttgcgc tgcgccgttc 1261 tctactgctt cgagtgcttc ctctaccgca acgcggatgg ccagcgggcg gtggtgcaga 1321 cgctgctgcc ctccagtgcc tccgatgtga gtgccctgtc cacgggtcag ctcctctgca 1381 ccggactctt ctcctctgac gccctggcca attggttttc ggccgtggcc ctgatgcatt 1441 cgctcgtgga gaatgtggcg ctgaaagagg aactactgcg cgttttgctg gccactcctg 1501 gcggccagag gcccatcacg ctgctcgagc agtgcagcaa tctcatgcag caggagcgct 1561 accgcctgca gagcaaggtg ggcctgctga tgctgctcag cctctggctg gcccactgcc 1621 ccggtgcggt gaaggcgctg ctggagacgc agggcaccat ggcctatttg acggcccagc 1681 tctgctccaa tgagcacgac gagcgcgagt tcctcgtgca gggcatgtgc gccttcctca 1741 tgggcctgtg catccagttc aacgacaact cgctgcccgg ccagaagcgc gaggacatca 1801 gccagctgat catcaagcgc atcggacagg agagcttctg cagcaagctg gcggaggtgt 1861 cgcgccacga ggcttatagt cgggcctgca aacaggcgca gatccgggcc aagtccgccg 1921 gcgaactgct gctcgactac gagtactgca agctgtacaa gggactggag gcgctgattg 1981 ccaagctggt gagcggcttc gatgtggacg gcatcgaact gaccgagctg acgctcagct 2041 cggaggcttc tgctttggtc tcgcagtaca aggggattat ccgtggcatg gatgggcaaa 2101 tacaggcact gcagcaatcc tctaaagaac tggagcagca gaatgccgag ctgaaggaga 2161 aactcggcga ggagcagtcg ctgcgagcgc agctttcgga ccagaacaca ctgctcaagg 2221 cgcagctggg agcttcagcg ggacaggaat cggagggcac aggagcagcc aacgaggagg 2281 agctgaatgc ggctcgctac caggccaaca tgtacttcgc cgagaacatc cgactgacca 2341 aggaactgga gacgctgcgc caacagttct ccggcgagaa gcagcgggcg gatgcggcgc 2401 aggaatcgct ggcggccacg caaaaggatc aggaggatct gctcgagctg ctggccgatc 2461 aggaggccaa gctgacgcgc tacgaggagg cggcggcggc ggcggcgaca tctttaccag 2521 ctgccaatga agcggaggag agtcccatcc caagtggcac cgccagcaga tagggatgag 2581 gatatcacaa ctggaagctg ctcgactgcc cgaaaaccct taaccatctt atatacacac 2641 attctacttg tttttattta tatatatttt acctacgtac agaatatatg cctagatcgg 2701 aa