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LOCUS XM_017142120 2516 bp mRNA linear INV 09-DEC-2024 X2, mRNA. ACCESSION XM_017142120 VERSION XM_017142120.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017142120.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2516 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2516 /gene="orion" /note="orion; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108057725" CDS 376..2304 /gene="orion" /codon_start=1 /product="uncharacterized protein orion isoform X2" /protein_id="XP_016997609.2" /db_xref="GeneID:108057725" /translation="MAAPIALFVVVVALVFCGNTKSASAEKWMHPRVPTLEVDALRTE YIALERSLWDYLAKTANSQNNKETQIRKVYDSHRDFDSKTLMGRNFEEHRYEILNHYE WTLLEKDLIYISKLYEAYKDTFVKQNNSGQLDELAVLNLARAILQNDNTASIPRILQE IERVMVAQTLYYRAMIVSTNQICNTMQSAQQFIYSLYADIALTELKAYTMMEFSWMML RVYGKGNYTQEADLMRSDYEKRTERTLKVLKDVMLRADRIVYRCDPAKHVAGVTYDEV TRLLQGYIENEVDLNNEETCRETCGFYQSTRSEGCFKDLYCSRQPKCTGRLYNCQFVD SDMWVCPSPQNSVRRYEFIEYENGRVLGQRGKCTRGTTKVDSWWRYLLWHCSYCFCLC DEQGLKSDRFFNLRDTIADVKRNRIVTGLRFVKKNRIFHLQIQEGELLPRGAVNQSTL EWKPVETYNFFDRDVKKGVDYHMLSYESRSIDLDDVDTDDNSFVITGVRFRVIGTHLN LEAYYSEFDFKTGQLIQPESNSYWKSNDNTDVSGARREKLRLDNADVSTRTITHSIPL SRHNQCIDFTNTGLDKDAAQSTVPFVDIQDVISNPPVPLAGIGIYYKGRNGYGGFLGP KIITYDFTPHVQVPKKKF" misc_feature 913..1677 /gene="orion" /note="Domain of unknown function (DUF4803); Region: DUF4803; pfam16061" /db_xref="CDD:465000" polyA_site 2516 /gene="orion" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 agcgtggagc gctttaaaac agaaactgaa aaattacagt agccgaacag cactcagaac 61 aacaacaccc agctgaaatt atatggcgag aggcgaggcg agcgcgaatt aaagtaaatc 121 gcaaataata aaaaatcgtg gaatctgtta atcgggaaag ggaatcctaa aacgtgattc 181 gattcggcct ctttgtttcc agtttccagt tcaaggaagt gtggaaagct agcttgccct 241 ttccactgga aagtcactac taaaatctag cagttgagaa gaagaagaag ctcaaggcta 301 aactatttgg aaatacaagg aagtccccgt tttttgatat tcgctgggcg gatataactt 361 atcgggcgag taaatatggc ggcgcctatc gctctgtttg ttgttgttgt tgcacttgtg 421 ttttgtggaa atacgaaatc ggcatcggcc gagaaatgga tgcatccacg cgttcccaca 481 ctggaagtgg acgccctgcg caccgagtat attgccctgg aacgctccct gtgggattat 541 ctggccaaaa cggccaatag ccagaataat aaggagacgc agataaggaa agtgtacgat 601 tcgcatcggg atttcgattc gaagacgctc atgggtcgca actttgagga gcatcgctac 661 gagatcctca atcactatga atggacactg ctggaaaagg atctcatcta tatcagcaag 721 ctatacgagg cctacaagga cacctttgtc aagcagaaca acagcggtca actggatgaa 781 ctggccgttt taaatctcgc cagggccatc ctgcaaaacg ataacaccgc ctcgatacca 841 cgcatcctgc aggaaatcga acgagtgatg gttgcccaga ccctctacta ccgggccatg 901 atagtgtcca ccaatcagat ttgcaatacg atgcaatcgg cccagcagtt catatactcg 961 ctatatgccg acatagccct caccgaactg aaagcctaca ccatgatgga gttctcgtgg 1021 atgatgttgc gggtctacgg caagggcaac tacacccagg aggcggatct catgcgatcg 1081 gattacgaga agcggacgga acgcacacta aaagtgctca aggatgtaat gctgcgagcg 1141 gatcgtattg tctatcgctg cgatccggcg aagcatgtag caggtgtaac ctacgacgag 1201 gtcacgcgac tcctgcaggg ctacatcgag aacgaggtgg atctgaataa cgaggagacg 1261 tgccgcgaga cctgcggctt ctatcagtcc acccgcagcg agggctgctt caaggatctc 1321 tactgttccc gccagccaaa gtgcacgggt cgcctgtaca actgccagtt cgtcgactcc 1381 gacatgtggg tgtgtccgtc gccgcagaac agcgtccggc gctacgagtt catcgagtac 1441 gagaacggac gcgtccttgg gcagcgcggc aagtgcacca ggggcaccac caaggtggac 1501 agctggtggc gatacctcct ctggcactgc agctactgct tctgcctgtg cgatgagcag 1561 ggtctcaagt cggatcgctt cttcaaccta cgcgacacga tcgccgatgt gaagcgcaac 1621 agaatcgtga ctggcctgcg tttcgtgaag aaaaaccgca tctttcacct gcaaatccag 1681 gagggcgaac tcctgcctcg cggcgccgtc aatcagagca ctctggagtg gaagcccgtg 1741 gagacgtaca acttcttcga tcgggacgtg aaaaagggcg tcgactatca catgctcagc 1801 tacgagagtc gctccatcga tctggacgac gtggacacgg atgacaatag ctttgtgatc 1861 accggcgtgc ggttccgtgt gattggcact catctaaatt tggaggccta ctacagcgag 1921 ttcgacttca agacgggcca gctcatccag ccggagagca acagctattg gaagtccaac 1981 gataataccg atgtcagcgg ggcacgcagg gagaaactgc gcctggataa cgcggacgtg 2041 tccacgcgga caatcaccca ctcgatacct ctgtcgcgcc acaatcagtg catcgacttc 2101 accaacacgg gcctggacaa ggatgccgcc cagagcaccg tgcccttcgt ggacattcag 2161 gacgtgatct cgaatccacc agttccactg gccggcattg gcatctacta caagggccgc 2221 aacggctacg gcggcttctt gggccccaag atcatcacct acgacttcac gccccacgtt 2281 caggtgccaa agaagaagtt ctagagggtg ctgttccaac ccgcacacat atgtcatagc 2341 tttcttagtt ttacactacc tatcaataca cacttgcaat tactgtcgcg tagtctaagt 2401 gagagaccga aggaggagga cgcagaatca ggcgagacaa aagaatataa ctaaaattat 2461 attggaattt agccatacga aaagagaaac aaataaagag aaccgagaga aacgaa