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LOCUS XM_017141501 2519 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017141501 VERSION XM_017141501.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017141501.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2519 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2519 /gene="Phf7" /note="PHD finger protein 7; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108057300" CDS 222..1757 /gene="Phf7" /codon_start=1 /product="PHD finger protein 7" /protein_id="XP_016996990.2" /db_xref="GeneID:108057300" /translation="MVNMCVLCRSSESDELIFGKTIREGALMVHHNCLYLSSNLVQRG NKRIGILRFLKDDIVAEARRCKQLNCFYCHKPGANIGCCKSGCRRTFHTKCGVDNLAQ SQFRDTYKSYCHQHVRHHRFRPSSDQEPCVICKDPLIAGGERFNVVTMLYSPCCRNGW YHRNCLQAYANTAGYFFKCPLCNNAKVFHDVALMGISLSSQDASWETEPNAFAEHFVR PLDCTAEDCLALAGRSDTSISLYYCNNCGSNPSHSFCTAQDQETYVCGICSIVSPAPP PSINSNDDEEELSSSSDECDPLETFARERRSNNQTINQTAANNSRDFIHSKLCVSGWD DTDTEDDEEVFQRAVEVKQPAIPADELPSTSAAAVNRRSRRLTMAAMGAADVEKENKN SGAAEAATRRRSLRLSAQNNQENTEPTTSGSTSSTIRSRRTMPARRIEKEEKQANEEA EKKKRCLSPNRRFLRSISPNEVKPLRRRTMASSNPSHGLMDMSCVANRTRNRLPGYLA HRK" misc_feature 234..569 /gene="Phf7" /note="Extended PHD finger found in PHD finger protein 7 (PHF7) and G2/M phase-specific E3 ubiquitin-protein ligase (G2E3); Region: ePHD_PHF7_G2E3_like; cd15669" /db_xref="CDD:277139" misc_feature order(426..428,453..467,483..485,552..554) /gene="Phf7" /note="putative histone H3 binding site [polypeptide binding]; other site" /db_xref="CDD:277139" polyA_site 2519 /gene="Phf7" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 caaaacgaga aatatacaaa caatcagtta gcaaaaccga aaatcgaaaa atccagcagg 61 caagtctggc aaccctgtcg accgcagggc tgcataccga ttaatcggca tttcgcgcgc 121 gtcccgctct tcttcttcgc cgtcggtttt tgcaaaattt gttatttctt gctaattaat 181 aagtttccgg gataaaaggg cggtaaaagc gaagcgcagc catggtgaac atgtgcgtgt 241 tgtgccgcag cagcgaatcg gatgaactga tctttggcaa gaccattcgc gagggcgcat 301 tgatggtgca tcacaattgt ttgtacctca gttcgaacct cgtgcagcgc ggcaacaagc 361 gcatcggcat cctgcgcttc ctcaaggacg acatcgtggc ggaggcgcgt cgctgcaagc 421 agctaaactg cttctactgc cacaaaccgg gcgccaatat aggatgctgc aagtcgggct 481 gccgtcgcac cttccacacc aagtgcggcg tggataatct cgcccagagt cagttcaggg 541 acacctacaa gtcgtactgc caccagcatg tgcgtcatca tcgttttcga ccctccagcg 601 accaggagcc ctgcgtcatc tgcaaggatc cgctgatcgc cggcggcgaa cgcttcaatg 661 tggtcaccat gttgtactct ccctgctgcc ggaatggctg gtatcaccga aattgcctgc 721 aggcttatgc caacaccgcc ggctacttct tcaagtgccc gctttgcaat aatgccaagg 781 ttttccacga tgtcgccttg atgggcattt ctctatccag ccaggacgcc agttgggaga 841 ccgaaccgaa tgcctttgcc gagcatttcg tgcgaccgct ggactgcacc gccgaggatt 901 gccttgcttt ggcgggccgc tcggacacgt ccatttctct gtattactgc aacaactgcg 961 gctccaatcc gtcgcacagc ttctgcaccg cccaggatca ggaaacgtat gtttgcggca 1021 tctgttcgat cgtttcgccc gctccgccgc cctctattaa ttccaacgac gacgaagagg 1081 agctgtcctc cagctccgat gaatgcgatc ccctcgagac tttcgcccgg gagcggcggt 1141 ccaataacca gacaatcaac caaacagccg ctaataactc gcgcgatttt atacactcca 1201 agctgtgcgt ctccggctgg gatgacaccg acaccgagga cgacgaggag gtctttcagc 1261 gggcagttga agttaagcag ccggcaatcc cagccgatga gctgccctcc acttcggcgg 1321 cggcggttaa ccgcagatcc aggcgcttaa ctatggcggc aatgggagca gcggatgtgg 1381 aaaaggaaaa caagaactca ggagctgcgg aagctgccac acgacgccgc agtctgcggc 1441 tgtcggcaca gaacaaccag gagaacacag agccaaccac tagcggctcc acctcttcaa 1501 ccattcgctc caggcgcaca atgcccgcca gaaggattga aaaggaggaa aagcaggcca 1561 atgaggaagc agagaagaag aaacgctgct tgtcgcccaa caggcgcttc ctgcgctcca 1621 tttcgcccaa cgaggtgaag cccctgcgcc gcaggacaat ggccagttcg aatcccagtc 1681 acggactcat ggatatgtcc tgcgtggcca acaggacgcg caaccgcttg ccgggctact 1741 tggcccaccg caagtaggtt gggaagatac tatatacaag atatatcccc taaaacatac 1801 acattccatg tacagaacat cgaccaggca gcggatccca atgcgggcgt tccatccgct 1861 gctgctactt tattttataa ctctctgttt agcttgttaa attattttac gactttccgt 1921 tgtacaacta ccacttaaaa gaaaaaaaaa cccacacaga tctcctaact aaaaatgtgg 1981 taataagttt ggaccccttt tggcatgaag aatacctttt attttacttt ttttgaatta 2041 atctaaggaa tgaatattta caagtttatt taaaaagtat gctcttttgt acatattttt 2101 atgggcactt aaccaatagt aaaaaaaatg tatctacaca tatgaacttt gtcatgatta 2161 atttttttcg cttcaatatt ttttcaaata ttactttttt ttgaaactgc tgaaaaaaac 2221 tatctgatga aatgtgattt agaaaaacat ttacaaatat gaactttgtc atgattaatt 2281 ttttttagtt ttcacttaac caatattttt ttaaatatta ctttttttgt aactgctgag 2341 aaaagcacct gaatgattta aaaaaaaaaa ccttcaaaat tctttgtatg caacttaaac 2401 tttgtattga atattttttt agttttccaa aaataaagga atcaaaaata tgtttatgtg 2461 atgtgattta ccttccaaaa aaagttaatt tttcaaataa actaaagatt aaaatcata