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LOCUS XM_017141491 1098 bp mRNA linear INV 09-DEC-2024 isomerase, mitochondrial (LOC108057291), mRNA. ACCESSION XM_017141491 VERSION XM_017141491.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017141491.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1098 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1098 /gene="LOC108057291" /note="delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108057291" CDS 87..1046 /gene="LOC108057291" /codon_start=1 /product="delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, mitochondrial" /protein_id="XP_016996980.2" /db_xref="GeneID:108057291" /translation="MSLSRLNTLMKLAPQSAAAASTVMRSPQRNLSAQSQPESGVTGG HHFKTLAISSPKPFVFHVELHRPNKFNAINKQMWLEIKECIDGLAINPDCRAIVVSAA GKHFTAGIDLNDMMNLGQTLAETDDYARKGVVLERMIKLYQDSISSLELCPKPVITAV HKACIGAGVDLITASDIRYATEDAFFQVKEVDIGMAADVGTLQRLPKAVGSQSLAREL CYTGRKFEASEAHSSGLVSRLFPDKESLLSGALALAEQIASKSPIAVKTTKESIVYSL EHTNQEGLDHIRLLNKLNLLSEDFAQAVAAQLTKDEKPVFAKL" misc_feature 261..1037 /gene="LOC108057291" /note="Crotonase/Enoyl-Coenzyme A (CoA) hydratase superfamily. This superfamily contains a diverse set of enzymes including enoyl-CoA hydratase, napthoate synthase, methylmalonyl-CoA decarboxylase, 3-hydoxybutyryl-CoA dehydratase, and dienoyl-CoA isomerase; Region: crotonase-like; cl23717" /db_xref="CDD:474030" misc_feature order(294..296,300..302,396..398,408..422,573..575, 579..587,651..656,663..665) /gene="LOC108057291" /note="substrate binding site [chemical binding]; other site" /db_xref="CDD:119339" misc_feature order(414..416,585..587) /gene="LOC108057291" /note="oxyanion hole (OAH) forming residues [active]" /db_xref="CDD:119339" misc_feature order(525..527,549..551,612..623,657..668,684..686, 690..698,702..707,723..728,732..737,741..746,753..755, 786..788,795..797,843..845,852..857) /gene="LOC108057291" /note="trimer interface [polypeptide binding]; other site" /db_xref="CDD:119339" polyA_site 1098 /gene="LOC108057291" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 cccgccattt atcgataaac aaacaacgac taatttcgca gccgcaacaa gtggatttta 61 tttgaaatag ttatttttct ataattatgt cgctctcccg actgaacaca ctgatgaagc 121 tggcacccca atcggcagct gccgcctcca ccgtcatgcg atctccccag cggaacctct 181 ccgcccaatc ccagccagaa tccggggtca ccggtggcca ccatttcaaa accctggcca 241 tcagttcacc caaacccttc gtcttccatg tggagctgca tcgtcccaac aaattcaatg 301 ccatcaacaa gcagatgtgg ctggagatca aggagtgcat cgatggactg gccattaatc 361 cggattgccg tgccattgtg gtttccgctg cgggcaagca ttttaccgcc ggaatcgatc 421 tgaatgacat gatgaacctg ggccaaacgc tggccgagac ggatgactat gcccgcaagg 481 gcgtcgtttt ggagcgcatg atcaagctgt accaggattc gattagcagt ctggaactct 541 gccccaaacc ggtgatcaca gcggttcaca aggcttgtat aggagcagga gtcgatctga 601 ttaccgcctc cgacattcgc tacgccaccg aggacgcctt cttccaggtg aaggaggtgg 661 acatcggcat ggccgccgat gtgggcaccc tgcagcgtct gcccaaggcg gtgggcagtc 721 aatctttggc ccgcgagctc tgctacacgg gtcgcaagtt cgaggcgtcg gaggcccatt 781 cctcgggcct cgtgagtcgc ctctttcccg acaaggagtc cctgctcagc ggcgccttgg 841 ctctggccga gcagatagcc agcaaaagtc ccattgccgt gaagaccact aaggagagca 901 tcgtctactc gctggagcac accaatcagg agggtttgga tcacattcgc ctgctgaaca 961 agctgaacct gctgtcggag gactttgccc aggccgtggc cgcccaattg accaaggacg 1021 agaagcccgt gttcgccaag ctgtgattta ccatgtattt acaatctaaa atacaccagc 1081 tgcctttatg actaggaa