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LOCUS XM_017141483 1310 bp mRNA linear INV 09-DEC-2024 transcript variant X2, mRNA. ACCESSION XM_017141483 VERSION XM_017141483.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017141483.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1310 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1310 /gene="LOC108057284" /note="TIP41-like protein; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108057284" CDS 130..945 /gene="LOC108057284" /codon_start=1 /product="TIP41-like protein isoform X2" /protein_id="XP_016996972.2" /db_xref="GeneID:108057284" /translation="MSNECFVPRLPVDSEAIHFHGWDISYEKSHILKSSCKLGTAEVC PKDSADRCDLCHYQYSLELPHLPDMVFHKNRLLLKHKDGAVLEFRPMEALALVANGKQ PLEVACAQEWRETRNEQTMEEKFKPFDWTFTSTYQGTMNEKVRSEPTDQTLNKFKLMQ RENIIFYHDLTLFEDELHDHGISVMSVRIRVMPSGFFILLRHFLRVDDVLIRMHDTRF HHEIENDFILKEYIHREAPCSELQNSVAFWTNPDEMQNFLPVKTKQMHKLLFK" misc_feature 340..834 /gene="LOC108057284" /note="TIP41-like family; Region: TIP41; pfam04176" /db_xref="CDD:461208" polyA_site 1310 /gene="LOC108057284" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 atcgataaat aacaacacta taatgtaatg ttcttatcga taacagccaa gtgcattgtt 61 ttcaggactt ttttaaacag gatttacacc ttgaatagag tctgctacag tttctagcag 121 ataccggcca tgtcaaacga gtgctttgtg ccccggctgc cggtggacag cgaggcgatc 181 cacttccatg gatgggacat cagctacgag aagtcgcaca tcctgaagag cagctgcaag 241 ctgggcaccg ccgaggtctg tcccaaggac tccgccgacc gctgcgacct ctgccactac 301 cagtactccc tggagctgcc ccacctgccc gacatggtgt tccacaagaa ccggctgctc 361 ctcaagcaca aggacggcgc cgtcctcgag ttccggccca tggaggccct ggccctggtg 421 gccaacggca agcagcccct ggaggtcgcc tgcgcccagg agtggcggga aacccgcaac 481 gagcagacaa tggaggagaa gttcaagccc ttcgactgga cattcacgtc cacctaccag 541 ggcaccatga acgagaaggt gcgctcggag cccacggatc agacgctcaa caagttcaag 601 ctgatgcagc gcgagaacat catcttctac catgatctca ctctgttcga ggacgagctg 661 cacgaccacg gcatctccgt gatgagcgtg cgaatccgcg tgatgccctc gggtttcttc 721 atacttttgc gccactttct gcgcgtggac gacgtgctca tccggatgca cgacacccgc 781 tttcaccacg agatcgagaa tgactttata ttgaaggagt acatccaccg ggaggcgccc 841 tgctccgagc tacagaattc cgtggccttt tggaccaatc ccgatgaaat gcagaacttt 901 ttgcccgtca agaccaagca gatgcacaag ctcctcttca agtagtccat tgattgatcg 961 aaaacaacgt attggttaga actgctgcta tgtgcgttta tttaatgcca ccactgtgcg 1021 catgcgcaga cattaaaagc gattttccta aaaggcacac tacgaataag gctattaata 1081 cggatacaat atgtatgctg aggatcccgc ccaggcttag gcggttccaa gaagggcggt 1141 cagggcccgc ttgtagtcgc cagaagtctc cgcctgaaag taaaacgatt taaaaacggg 1201 atgaaagcga ctcgaagctg aacctaaaat atgccctaat tacactacaa ttactcttta 1261 taaatacaca gtttctaatg ttaagccaat aatgaaattt tgaaaagtaa