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LOCUS XM_017141444 7900 bp mRNA linear INV 09-DEC-2024 (LOC108057266), transcript variant X1, mRNA. ACCESSION XM_017141444 VERSION XM_017141444.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017141444.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7900 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7900 /gene="LOC108057266" /note="uncharacterized LOC108057266; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108057266" CDS 1384..5562 /gene="LOC108057266" /codon_start=1 /product="uncharacterized protein" /protein_id="XP_016996933.3" /db_xref="GeneID:108057266" /translation="MDTKLEARGQFPASFPDTFKNFFAMMNEDEDHVGLFANLLEDKV IPRQNSPVQPQRQRYGGSMRSHSGGDRNDRRGRAERQYQQHQQQIQQQQQQQQQQNAQ QQRAFQPRGRSGSGSSIDLYASRNVGFVNTATTSRVNSLRRNRSRGSLTLSSNGLNAL GLGPVTLAPNVSSSSSGSVLDLTLPPGNAAGGSLGAGGSGGSVVAGGSGPNMYASPSK SNLKSALKSTSATVDRGCAILLGSDIKICCLHDEHTINGRQHLQQQLQQQQMSSGQKK HVTLACCECVCGNGQASRSGPDGEDNGGVNYMRGYVAGYQLPQTPKGKPIDKSSTFTS AEVAASKNKDLQERQERQEKRGSVILERAFDFDASCDESDSISSSTQHPVPSPAPHQP AYNVLKPILKQPHQQQQQKVMLQQQHQQVNPQQYQQVTHSHQQHQGIAHQQHQVVTHQ QHHQQQQHLQVGHQQVIHQQHQLSTHPTHPQPMQVHPQVQHPPPGGHVVHRLLPTPPT HSGLGAYHTREAALQRVQQQSGYYNQGPSTSASAYGYNQSMEHQQIQMQMQMQQQLQY DQHQELQFEQHQQHLQHQVHQQQHQHQQYADDTELDYDTEWELDEEPAPQIVPPLTTF NDFVNAAQNPTGSRQSLRAQKSPILNRRRASSIAGNLLHSDYTYTRNSIGGAPIDPND FQRISHSSSARDRMSLAGVLTFQQAMSGAVSPQYGTVGSMNPQASGSGEKKPGMVGAE AMGGGGLPGGSAHNLNLTVGLGFLGGSSTTLAAVAEVTSGPDGNGDSTDSPSPVSMIP TSKQQQQQQKQQQLLQLQLQQEQQLLPTHLPMQRERGVGESSGASTSGTVIADLAASV VLASQSGKPMTERQRLRTSSMPAESRRPRLAEMRRSAIHAGDPDMTYYRLRSFSITSH GICNLGDSLRSRRSRSINSVTSTGTSNSGVDRHNSNASGASGEVIDGDPNVPAYKIAM LGGSGVGKTTLTYQFTTSDYICAYDLSLDDDYGQKTVSVLVDNIETDLEIIDHPACEM STEAFCATYNIDLFVVVYSVIDRNTFAAAERVLQYLKENEMLLSRGAILVANKTDLQR HRVVTRQMGRKVAKDIACKFIETSSGLDHNVDELLVGIVAQVKLNPQRLRLLTELELQ RLNLQSTIQKHRGMHLQTRRMVRQMSVCQGDEEIFDGGLQERLPNGDANGGDPDGVPS TSRASRSRIENPNRKPLNLESILKMGESEVDEEEEAGAGAVKPTPLSKFNMLAATIRH RRPFRKRRSFDGGVSTSAAADAAAELQRRYQLRAMDDLQLEGRLAAEERFGLADSDDE LELEVDGGAEDGAGGGSGGGGVDGGRRNTCNRKVVKKLTARTKVFISSVLRFKKAISL KRRNSSSCSDLFVI" misc_feature 4285..>4788 /gene="LOC108057266" /note="Rem, Rem2, Rad, Gem/Kir (RGK) subfamily of Ras GTPases; Region: RGK; cd04148" /db_xref="CDD:206715" misc_feature 4303..4326 /gene="LOC108057266" /note="G1 box; other site" /db_xref="CDD:206715" misc_feature order(4306..4311,4459..4464) /gene="LOC108057266" /note="putative GDI interaction site [polypeptide binding]; other site" /db_xref="CDD:206715" misc_feature order(4309..4329,4453..4455,4462..4464,4627..4632, 4636..4638,4717..4722) /gene="LOC108057266" /note="GTP/Mg2+ binding site [chemical binding]; other site" /db_xref="CDD:206715" misc_feature order(4324..4329,4363..4365,4369..4371,4396..4401, 4444..4449,4453..4455,4459..4464,4723..4725) /gene="LOC108057266" /note="putative GEF interaction site [polypeptide binding]; other site" /db_xref="CDD:206715" misc_feature order(4366..4371,4387..4389,4393..4401) /gene="LOC108057266" /note="putative effector interaction site [active]" /db_xref="CDD:206715" misc_feature order(4366..4389,4393..4398) /gene="LOC108057266" /note="Switch I region; other site" /db_xref="CDD:206715" misc_feature 4372..4374 /gene="LOC108057266" /note="G2 box; other site" /db_xref="CDD:206715" misc_feature 4453..4464 /gene="LOC108057266" /note="G3 box; other site" /db_xref="CDD:206715" misc_feature order(4459..4464,4480..4491,4501..4512) /gene="LOC108057266" /note="Switch II region; other site" /db_xref="CDD:206715" misc_feature 4627..4638 /gene="LOC108057266" /note="G4 box; other site" /db_xref="CDD:206715" misc_feature 4717..4725 /gene="LOC108057266" /note="G5 box; other site" /db_xref="CDD:206715" ORIGIN 1 tcggacgaaa gtgtttggaa acgatcacat atcagttaaa acatatttac ctacgcaaat 61 ataaagtgaa aaccatcaaa attcaaataa aatattggaa atcgatgtca aaattgtaac 121 catcagaaac ggaagtcaag ggatcgaaga attctcaaat caaagtcaat ggaaatcaaa 181 ttgagaatcg aaatttaaac ttaccatcat atgaattgaa cttcaaatca actagcaagt 241 attcagttat tatagataag ccttttaact aatcaactta ttggtgtgaa tacttaatct 301 caaaacaata tattctatat taagatgatc tttatgatcg agactattag atatcaagtc 361 cgatcattat atacacatat taatcaaata tttaagaaaa aaacttcaac ataaaaacta 421 aactaaaaat cgatccaaga agatcacaaa aaaacatatt taaacattgt agaataaact 481 caacttgatt gaaactatta agcccatcac gatcactgtc tatgaatcaa aattttagac 541 aatttaaatt tatcaagagt atacttctat tgatctgttc ttaaatacac aaatataacc 601 aaagaatcta taaccatttg agaaaagcta ttgaaaatac gctcattact atgtaaacaa 661 aaaacatact aaacatacag aaacaactat ttaaatgtaa ttattaactt acatttacct 721 taagatacat tgatatctat gaaaaatcta agaagagctt aaaatgcatc ccatacttga 781 tcgctactat agcgatctgt ttcagatcaa gcttataacc cgatatttga tcgagctgat 841 tcggttaaga aagaaaaata ggcaaaattc ccaggagtcg cagtaacgga tacgcagttc 901 aaagcgatct tgtatcataa acaataaacc aagcgagatc ggaaagatct acgaaaatat 961 taaaaccgaa aatatcgcag tgagtcgata ctgcattgag aagaacttaa taatactata 1021 aaccccactt gactttatta atataccagc ctaaggacat ctcataagag atcccagatc 1081 gatatagaat cgagttaaga actctcagtc cagaaactaa aatccaaatc aaaacatatt 1141 aaaaatcgaa ttcgagtttg taaatcgcga tcgcgtatcg aaaccttgcc gatgttgtaa 1201 attagatgac tttgaatctg attcccgacc tgaagccaaa tatattcatc atgagggtcc 1261 agaatcgacc aggacatgtg atctaaggac atcgcaacta gcagtttttt cattgaagaa 1321 ggaaaaaatc aaaaaaaaaa tcagaagaga aagtgagaaa gaaaagagag tggtagagga 1381 gccatggata ccaagttgga ggctcgtggc cagtttccgg cctcgttccc cgacacgttt 1441 aagaacttct ttgcaatgat gaacgaggac gaggatcatg tggggctgtt tgccaatctg 1501 ctggaggata aggtgattcc gcgccaaaac agccccgttc agccgcagcg gcagaggtac 1561 ggcggcagca tgcggagtca cagtggcggc gatcgcaacg atcgaagggg tcgcgccgaa 1621 cggcagtatc agcagcatca gcagcagatc cagcaacagc agcagcaaca acagcagcag 1681 aatgcccagc agcagcgagc ctttcagccg cgcggtcgca gtggcagtgg cagcagcatc 1741 gacctttatg ccagccgaaa tgtaggtttc gtcaacaccg ccaccaccag ccgggtcaat 1801 tcgttgcgca ggaatcgctc gcgaggatcg ctgaccctga gcagcaatgg gctaaatgct 1861 ttgggcttgg gacccgtcac cctggcacca aatgtcagtt caagcagcag cggcagtgtc 1921 ctcgacttga ccctgccacc cggcaatgca gcaggaggat ccttaggagc aggaggatca 1981 ggaggatctg tagttgcagg aggaagtggg ccgaatatgt atgcatcccc ctcgaaatcg 2041 aacctcaagt cggccttgaa gtcaaccagt gccactgtgg atcgcggatg tgccatcttg 2101 cttggcagcg acatcaagat ctgttgtctg cacgatgaac acaccataaa tggccgccag 2161 caccttcagc agcagctcca gcagcaacag atgagctctg gtcagaagaa gcacgtgacc 2221 ctggcctgtt gcgagtgcgt ttgcggcaat ggccaagctt cacgttccgg acccgatggc 2281 gaggacaacg gtggggtgaa ctatatgcga ggatacgtcg caggatacca gttgccgcaa 2341 actcccaagg gcaagcccat cgacaagtcg agcaccttca catccgccga ggtggcggcc 2401 tcgaagaaca aggatctgca ggagcgccag gagcggcagg agaagcgtgg atcggtcatt 2461 ctcgagaggg cctttgattt cgacgccagc tgcgacgaga gtgacagcat aagcagcagc 2521 acccagcatc cggtgccctc gccggctccc caccagccgg cctacaatgt cctcaagccg 2581 atcttgaagc agccgcatca gcagcagcaa cagaaggtga tgttgcagca gcaacatcaa 2641 caggtaaatc cacagcagta tcaacaggtg acccattccc atcagcaaca ccaggggatt 2701 gcgcaccagc agcatcaagt ggtgacccat cagcaacatc accagcagca gcagcatcta 2761 caggttggcc accagcaggt gatccatcag cagcaccaac tgtccaccca tccgacgcac 2821 ccacagccca tgcaggtgca cccacaggtg cagcatccgc cccctggcgg tcatgtggtg 2881 caccgcctgc tgcccacacc gcccacacac agtggcttgg gtgcctacca cacccgtgag 2941 gcggccttgc aacgggtgca gcagcagagc ggctactaca accaagggcc cagcacctcg 3001 gcatcggcct acggctacaa ccagtccatg gagcatcagc agatacagat gcaaatgcag 3061 atgcagcagc agttgcagta cgatcagcac caggaactgc agttcgagca acatcagcaa 3121 catctgcaac atcaggtaca tcagcagcag catcagcatc agcagtacgc cgacgatacc 3181 gagttggatt acgataccga gtgggaattg gacgaggagc ctgctcctca gattgtcccg 3241 ccactcacca ccttcaatga ttttgtcaac gcggcccaga atccaactgg cagtcgtcag 3301 agtctgaggg cccagaagtc cccgattttg aacagacgtc gcgcctcatc gatagccgga 3361 aatttattgc actcggatta tacgtacaca cggaacagta tcggcggagc tccgatcgac 3421 cccaacgatt ttcaacggat ttcccacagc agcagcgcca gggatcgcat gtctctggcc 3481 ggagttttga cctttcagca ggccatgtcc ggagcggtct caccacaata tggcaccgtg 3541 ggctcaatga atccccaggc ttccggttcc ggtgagaaga aacccggaat ggtgggagcc 3601 gaggccatgg gtggtggtgg tctacccggc ggatcggcac ataatctaaa tttgaccgtg 3661 ggcttggggt ttctcggtgg atcaagcacc accttagctg ctgtcgccga ggtgactagt 3721 ggaccggatg gcaatggcga ctccaccgac tccccatcgc cggtctccat gatcccgacc 3781 agcaagcagc agcagcaaca gcagaagcag cagcagctac tgcagttgca gttgcagcag 3841 gagcagcagc ttttgcccac ccacttgcca atgcagcggg aacgaggcgt gggcgaatcc 3901 tcgggagcca gcacttcagg caccgtcatc gccgatctgg ccgcctccgt ggtcttggcc 3961 tcccagtccg gaaaacccat gaccgagcga cagcgcttga ggacctccag catgccggca 4021 gaaagtcgca ggccccgcct ggcggagatg cgacgctcgg ccatccatgc cggtgatccg 4081 gacatgacat actaccgtct gcgtagcttc agcatcactt cgcatggcat ctgcaacctg 4141 ggcgattccc taagaagccg caggtcacgt tcgatcaatt ccgtgacttc cacgggtact 4201 tcaaacagcg gcgtggatcg acacaatagc aacgcatcgg gggcatcggg cgaagtcatc 4261 gacggggatc ccaatgtgcc cgcctacaaa attgccatgc tcggcggctc cggagtgggc 4321 aaaaccacac tgacttacca attcaccact tccgattaca tttgcgcata cgacctgagt 4381 ctcgatgatg attatggaca gaagacggta tcggtgctag tcgataacat tgaaacggat 4441 ttggaaatta ttgatcatcc cgcatgcgag atgtcgacgg aggccttctg cgcaacctac 4501 aacatcgacc tcttcgtggt ggtctactcg gtgatagatc gcaacacttt cgcggcggcc 4561 gagcgggtcc tgcagtatct caaggagaac gagatgctct tgtcacgcgg agccattttg 4621 gtggccaaca aaacggattt gcagcgccat cgcgtcgtta cacgtcaaat gggccgcaag 4681 gtggccaaag atatagcttg caaatttatc gagacttcat ctggtttgga ccacaatgtg 4741 gacgagctgc tggtcggcat tgtggcccag gtgaagctca atccgcagcg gctgcgattg 4801 ctaacggagc tggagctgca gcggctgaac ttgcagagta cgatccagaa gcaccgcggc 4861 atgcacttgc agacgcggcg aatggtccgc cagatgagcg tctgccaggg cgacgaggag 4921 atcttcgatg gcggattgca ggagagattg ccgaacggcg acgccaacgg cggcgatccg 4981 gacggagtgc ctagcacgtc gagggcgagc cggtcgcgga tcgagaatcc caaccgcaag 5041 cccctcaacc tggagagcat tctgaagatg ggcgagagcg aggtggacga ggaggaggag 5101 gcgggggcgg gggcggtcaa gccgacgccc ctcagcaaat tcaatatgct cgcggccact 5161 atacggcatc ggcgtccgtt tcgcaagcgt cgctcgttcg acggcggcgt ttccacatct 5221 gccgcagcgg atgcggccgc cgagctgcag cggcgctatc agctccgggc gatggatgat 5281 ttgcagctgg agggacgatt ggcggcggag gagcgattcg gtctggctga cagcgatgat 5341 gagttggagc tggaggtgga cggaggtgcc gaggacggag caggaggagg atcaggagga 5401 ggaggagtcg atggtggacg aaggaatacc tgcaaccgca aggtggtcaa gaaactgacc 5461 gcccgcacca aggtattcat ctcgtcggtg ctgcgcttca agaaggccat cagcctcaag 5521 cggcgcaact cctccagctg cagcgatcta ttcgtgattt aagcagctcg aggagctgag 5581 atagtatagg aagtaggaag tatagactga atgtacatag aaggaatata gaaggaggag 5641 tattatcgag aagtagcagg aacacgggaa caggagcagt agcaggagca ggagatccag 5701 ggatccagag accaagagag caggcacaac gaaaaagcag cgcaaaccgc ggtggagtcg 5761 aacacggaag tgcagggagt gcagaaggtc agcttatgag gaagtcatcc agtttagtag 5821 ccctcaaaga aaattacagg gacacacaca acatcatacg ttttgagagg tcagcggaca 5881 attgcagtat tagaccttta tatttttcat tgtttaaagg gcagctgcaa ttggtctgcc 5941 aaaagcgacc caaataaaat tgtaaagcaa aaactattgc caaagaaata tctagagatt 6001 ttgaaacccg ctttaaaagg tagctaaaag tgtattttag aaaaaaactt gtcttccggt 6061 ggttatattt gcaacttccg gataaaaaaa tgaattgcat acttaaaggg acctttttaa 6121 gtgatttcaa acctttagat tttgatgctg gctaatcgaa acaaaacaca ctccttttca 6181 ccccaaaccg aaccggtagg tggcgctgca atgcggacaa taattttctt gacaaacaaa 6241 aaatattgat cagcaaattt tacaaaatcg aaaatctaaa aaaagaagag aggtaaacat 6301 tttatgcaaa tgaaaaccga gtcctatccg ctaaaaaaaa tttgtaatgc agcaaaaaaa 6361 gaaaacaaca aaaaaactgg cgatttgtta agtggcacat gctttttgag aaacaggaaa 6421 caaccgcaaa ggcaatatat aaagggatac taacacaaaa tactgcaccc attttgatgt 6481 cgtttttttt tgaggtttct tgtcataatt aaacgcgtgg tttctggcga gtttcaagca 6541 taaaaggaat ggaccttaca acacatatag acagactaga tgaacatgga taggtagcta 6601 aagacaatgg ataaacgtgc aaaaacggaa acgatttttt ttagtcagac catgaaatat 6661 tgataaaggc aaagaaaata aataagaaaa aaacaaacaa aaagagcagt gcaaaattgt 6721 ttacaccatt gcaaacttta caaccttttt tatggtggca cgccttttaa tgaaattcga 6781 tttcattgtg ccaacggtcc agcttaattg ctcaaatatt aaaacacctt ttactatatt 6841 ggatacattt aaattattta cttacattta catttctttg tgatagtctt atagttgctt 6901 cttcactgga ccttccatta ccaatgtggg taatatatgt attgaaatac ttattttttc 6961 tatatgttta cttactataa atgcaatgtg agagttcttt ggaaaacctg ctgctcgttt 7021 ggctattgcc gaaatacgat atatatttaa aacataattg tctagcgcca agtttataag 7081 aaggaagaac aatttttttt gcgcgcacta tatcaagaaa tagacatata agtattttac 7141 acttctaaat gtcgtgtggt aaagaatacc gaaaatacac ataaaatcat cagcactacg 7201 aacacaacaa caagaacaat cagaaaacaa gtttagatgc aaatgtagag agcataaaat 7261 atatcaggcc agcccgtgaa ggtagtcctt gtttttctgg aattcctttc tgcgagaaaa 7321 aaatttggta tagaatattt ggaacaatgt tgtcccataa aatatttgtt aaacatttat 7381 aaaggaatcc agagaaaatg gtattgcctg tgttggcgcc cgagcaggga cttacctggg 7441 gctaggcatc atattacaca taaaatattc aatattaaga acttatcaat gttaagcgat 7501 atcagcaaaa atgagcaact attcatatcg catcaaatct ctgttgaaat ggctgagggg 7561 aaataaaaac ctgcacgccc cctaagtttc cccggctccc ttttcaattc cgtcggtcga 7621 tggaactcaa ggcagtcaag caaaaacctt aatgagctta accaaagcct gcaatactgt 7681 ctcgaaatgg aaaaggccat gaaagtatgg atgcagaagg gtggtcgtgc gagtttccta 7741 gaagctacta ccaaccgcaa actaacgcaa attacatagc aaaaggatac aaaaggttct 7801 ctagcagaag gtgttttaag aaaacggcag gttattgatt atattaattt gatttttaat 7861 tttataaaac accacagaat tatgaaatca attatgttca