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LOCUS XM_017141437 7761 bp mRNA linear INV 09-DEC-2024 Repressor in late S phase (Hers), transcript variant X4, mRNA. ACCESSION XM_017141437 VERSION XM_017141437.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017141437.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..7761 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..7761 /gene="Hers" /note="Histone gene-specific Epigenetic Repressor in late S phase; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 2 Proteins" /db_xref="GeneID:108057263" CDS 412..4731 /gene="Hers" /codon_start=1 /product="AF4/FMR2 family member lilli isoform X3" /protein_id="XP_016996926.2" /db_xref="GeneID:108057263" /translation="MRLKETTKKSAPSTNNQHHHNQKIAVPLSGDLLSTLHISPPLHP HHHHQLPLSVQLQHQLQQQQQHQLHHHQQRCSSVGSTSSSGTCETDRSGSCSSALSPA GGGMMPGLGASEGLVPGGGGVGGGAAIPGAGGASSASGGQGQGQGPNDEASAAAVLAA NIAESFTFLQQHAAHHFRDILYAAHMLGRGYYQPAGPLISPHVIAAPPPQAQVKKLQE EDSAAPVAGSPTQLQQHQAAAEAADQAAAAQSHSHSQSQANPTHGHAHAHGHAHNPQQ AQHPPQPQPYPASAVAAAAAAAAAHQGVPYSRSMHAAQMHYSTAYPPNYYAPYPGEVM CYSPPTYQPYFSSKVYQPSHPGHPAAHPQGPPPPGAYRRYPYYQHAGPPPPHELYEQQ QPPPPPVSVSTGSQQQQQPPTSSSGGAAGAGAAGAGAAGAGAPAGSQLVPAHQQQHQQ QHLEHYPGPPSYYAGYSPGGGASSGQCYTRGLQGPYMEYPPQCPCPMPQSCPKNVHTG PHIGSNIISNIDQSGSKNSSSSSSGSSSSCSSNMLLSATSSSNSSTLTACSNATTTTT ASALTTSRGPVKNVTPNNSDSSSNTSNSCNKNSSSSQTSETTSRATAATNTTNTTATT ATTGTQCQMLVKTELKGENPNPNPNPQVTKMQYEAHVMPPPTPPESYCASDEKLLDDQ EQEAELELRLRLGLRMEKGHGGQQQQQQHIEAYDLTCSTPPPVNSAPQAAAAAAAAVP RKARIGKSMAREMVYAAQQQLKQPKEGASAKMEPAEPEMPFVLKAEIKAETKIKIEHD GEAQVGSTHISDLPDLKPTIKTEPEQEQEQEQEQQPDAGVVTAVAKTEPEQQDQDQEQ PTPGGSKQRINLLASSGGNKKTKTNHSYKSLIKQAEPKNYLCPGRRFIRRHGRAPAKY AKRRQMILTQRQQQRMRLQRREQQQQRRQQREAAAAAVVSSPLGEPAKETGAEPPSVT EQGATPTASPKRARPRKQEIAALHLLEGLDTTLSRGYFSDPELNHSSRKQAPTAVGGL YAASSPLAPATDHRGKQPAAEKRSKSETKKPAVGEISDSALPCKKPRKQTAGKAKGKS KKSTGGGAAATVASSTAEMQSAAVSSGASGSSQETNNNEYQTADLQAQKFRESTAETE ATGTSANQQQHSDEQHQFLVPNQPAVGATAVAPTPPPPSTTPSRQNQTTHTKRARSRC KFGNRKRQRQRPGGVSYELDVTQPPATKANVVPKWNNGWMWAGTAFQGAVFLNSDDPL VLRTCYPAMRHVEGDIIRIRDCVLLKANEDNELPYVAKVAHLWQNPEDGEMMMSLLWY YRPEHTDQGRQRNDCPDEVYASRHRDHNSVACVEDKCYVLTFSEYCRYRRRLRAAEED VEDVSIVPRRPSSAIATGFPVRTVPEHTNPELVMFCRRAYEFRTRRLLKLPQKNGLVC SSS" misc_feature 4237..4698 /gene="Hers" /note="BAH, or Bromo Adjacent Homology domain, as present in mammalian BAHCC1 and similar proteins. BAHCC1 stands for BAH domain and coiled-coil containing 1. BAH domains are found in a variety of proteins playing roles in transcriptional silencing and the...; Region: BAH_BAHCC1; cd04714" /db_xref="CDD:240065" polyA_site 7761 /gene="Hers" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 gccacctttc aaatcgctta caacgcgtca gcgcgacgcg gacgctccaa acgcaaaaag 61 aaaaacggaa cagagaaaaa cccgtcaaat gaaaaatacg agaaacattg aataattaaa 121 agggaaaaga aagaaaacgc cttggaaata gtcggcgcta aaaaccaaga ggaaccaagc 181 gagggaaacg tttagaacaa gagttgcctt aacaatagaa cttccttgtt gacttacata 241 tacatatata caaatacata tacagtgtac atatatacaa gaatattata tacaaaatat 301 cacggaaact agaagcatat aagtcaaaaa tatataccaa tatatatatt ttttatacga 361 gagaaaaaac aaaaaaaaaa agggaaaaaa tcgaggaatc gcaaatcgaa aatgcgccta 421 aaagagacca caaaaaagtc ggcgccatca accaacaacc aacatcatca taaccaaaag 481 atcgccgtac cgctttccgg cgatctactg agtacgctgc acatttcgcc gccccttcac 541 ccacatcatc atcatcagtt gccgctctcc gtgcagctgc aacaccagtt gcaacagcag 601 cagcaacatc agttgcacca ccaccagcaa cgctgctcca gcgtgggcag caccagcagc 661 agcggcacct gcgaaacgga ccgctccgga tcctgttcgt cggccctttc gcccgccggc 721 ggtggcatga tgcccggcct gggtgcgagc gaaggattgg ttcccggagg aggaggagtc 781 ggaggaggag cagcgatacc aggtgcagga ggagctagta gtgccagtgg tggtcaggga 841 cagggacagg gacccaacga cgaggcctcc gctgccgctg tgctggctgc caatatcgcc 901 gagtctttca cgttcctgca acagcatgcg gcgcatcatt ttcgcgacat tttgtatgcg 961 gcccacatgc tgggaagagg ctattatcag ccggctggac cgctgatctc gccacatgtg 1021 atcgccgccc cgccgccgca ggcgcaggtg aagaagcttc aggaggagga cagcgcggca 1081 ccagttgccg gttcgccgac acagttgcag caacatcagg cggccgccga agccgccgac 1141 caggcggcag cagcccagtc tcattctcat tctcagtcgc aagccaaccc aacccacggt 1201 cacgcccacg cgcacggcca cgcccacaat ccgcaacagg cgcagcatcc gccgcagcca 1261 cagccgtatc cggccagcgc cgtggcggcc gcagccgctg cagccgccgc ccaccagggc 1321 gtgccctatt cccgctcgat gcacgcggcc cagatgcact actcgaccgc ctatccgccc 1381 aactattacg cgccatatcc gggcgaggtc atgtgctact cgccgcccac ctaccagccg 1441 tacttctcga gcaaggtcta ccagccatcg catcccggcc atcctgccgc ccatccgcaa 1501 ggaccgccgc cgccgggcgc ctatcgccgt tatccctact atcagcacgc gggtccgccg 1561 ccgccgcacg agctctacga acagcagcag ccgcccccgc cgcccgtctc tgtctcaacc 1621 ggatcgcaac agcagcagca gccgccgacc agcagttcag gaggagcagc aggagcagga 1681 gcggcaggag caggagcagc tggagcggga gcacccgccg gcagccaatt ggtgccggca 1741 caccagcaac agcaccagca gcagcacttg gagcactacc cggggccacc cagctactac 1801 gccggctaca gtcccggcgg aggagcctcc tccggccagt gctacacccg cggcctgcaa 1861 ggaccgtata tggagtatcc accgcagtgt ccctgcccaa tgcctcaatc gtgtccaaaa 1921 aacgtccata ctgggcctca tattggtagc aacataatca gcaacatcga ccagagcggc 1981 agcaagaaca gcagcagcag cagcagcggc agcagcagca gttgcagcag caacatgttg 2041 ctgagtgcca cgagcagcag caacagcagc accttgactg cctgcagcaa cgctacgaca 2101 acaactacag cgtcagcgtt gactaccagt agaggcccag tgaaaaatgt gacccccaac 2161 aacagcgaca gtagcagcaa caccagcaac agttgcaaca agaacagcag cagcagccag 2221 acaagtgaga caacctcacg ggcgacggcg gcaacaaaca cgacaaatac gacggcaacc 2281 accgccacaa cgggcaccca gtgccagatg ctcgtgaaga cggagctcaa gggcgagaat 2341 cccaatccca atcccaatcc ccaggtgacc aagatgcagt acgaggccca tgtgatgccg 2401 ccgcccactc cgccggagag ctactgtgcc agcgacgaga agctgctcga cgatcaggag 2461 caggaagccg agttggagct tcgattgcgt ctgggattgc gcatggagaa gggtcacggt 2521 gggcagcagc agcagcagca gcacatcgag gcgtacgatc tcacctgcag caccccgccc 2581 ccagtgaatt cagcacctca ggcggcggcg gcggcggcag cagctgtgcc gcgcaaggcg 2641 aggatcggca agagcatggc cagggagatg gtctatgccg cccagcagca gttgaagcag 2701 ccgaaggaag gagcttcggc taagatggaa ccagcggaac cagagatgcc tttcgtactt 2761 aaagccgaaa tcaaagcaga gaccaaaatc aaaatcgagc acgacggtga ggcgcaggtc 2821 ggcagcacac atatcagcga tttgccggac ctcaagccca ccatcaaaac ggagccagag 2881 caggaacagg aacaggagca ggaacagcag ccggatgcgg gagtagtaac agctgtggcc 2941 aaaacggaac cggagcaaca ggatcaggat caagaacaac ctacgcccgg tggcagcaag 3001 cagcgcatca atttgctggc ctcctccggc ggcaacaaga agaccaagac gaatcacagc 3061 tacaagagcc tgatcaagca ggcagagccc aagaactacc tgtgtcccgg tcgtcggttc 3121 atccgtcggc acggccgtgc tccggccaaa tatgccaagc ggcgtcagat gatcctcacg 3181 cagcgacagc agcagcggat gcgcctgcaa cgtcgcgagc agcagcagca gcgacggcag 3241 caacgcgagg cggcagcagc ggcagtggtg tcctctcctt taggagaacc tgcaaaggag 3301 acaggagcag aacctcccag cgttacagag cagggagcca ctcccaccgc ctcgccaaag 3361 agggcgcggc cacggaagca ggagattgcc gcactgcatc tgctcgaagg cctggacacg 3421 acgctcagtc gtggctactt cagtgacccg gagctcaatc acagcagtcg caagcaggcg 3481 ccgacggcag tgggcggcct ctatgccgcc tcctcgccgc tagcaccagc cactgatcac 3541 cggggcaagc agcccgcggc cgagaagcgc tccaagtcgg agaccaagaa gccagcggtt 3601 ggagagatct cggattcagc cttgccatgt aaaaagcccc gcaaacagac cgctggaaaa 3661 gccaagggca agagcaagaa gtcaacggga ggaggagcag ccgcgacagt tgcatcctcc 3721 actgccgaaa tgcagtcggc agcggtgtca tcaggagcca gtggatccag ccaggagacg 3781 aacaacaacg agtatcagac ggcagatctg caggctcaga agttccgtga gtcaacggct 3841 gaaacagaag caacgggaac atcagccaac cagcagcaac attccgatga gcaacaccag 3901 tttctggtgc ccaatcaacc tgcagtggga gcaactgccg ttgcaccaac tccccctcct 3961 ccttcgacga ctcccagccg tcagaatcag acgacgcaca cgaagcgggc cagatcgcgt 4021 tgcaagttcg gcaatcggaa gcgccaacgg cagcgacccg ggggcgtgag ctacgaactg 4081 gacgtcaccc agccgccggc aactaaggcc aatgtggtgc ccaagtggaa caacggttgg 4141 atgtgggcgg gcaccgcctt ccagggcgcc gtctttctca atagcgatga tccgctggtg 4201 ctgcgcacct gctacccggc catgcggcac gtggagggcg acatcatccg catcagggac 4261 tgtgtgctgc tcaaggccaa cgaggacaac gaattgccct acgtggccaa ggtggcgcat 4321 ctctggcaga atcccgagga tggcgagatg atgatgtcgc tgctgtggta ttacaggccc 4381 gagcacactg atcagggaag gcagcgcaac gattgtcccg acgaggtgta cgcctcccgg 4441 caccgcgatc acaactcggt ggcctgcgtc gaggacaagt gctatgtgct caccttcagc 4501 gagtattgca ggtatcgtcg ccgcctgcgt gccgccgagg aggatgtgga ggacgtgagc 4561 attgtgcccc gtcgaccgag cagtgccatc gccaccggat tcccagtgcg cacggtgccg 4621 gagcatacga atccggagct ggtgatgttc tgccgtcggg cctacgagtt ccggacgcgt 4681 cgcctgctca agctgcccca gaagaacggg ctcgtttgca gctccagcta gcgcaaggca 4741 ttgaactgtg gagtgtagga acattagctt aaattcagat tgcagtgcgg tgcaattgga 4801 gcagcgatga gatgagttga ggagaaagcc ctggcagaga ataagaaaag gcgtaggaag 4861 aaagttaaat tgttttgatc agtctacagt attgttaaag atattttttg tctttgttgt 4921 tgagagagat atctgtaagg aggaaaagaa ggaaggaaaa agggggctgt gccagtgcat 4981 tcgttgttcc taaccaaatt tcgattgctc tcgttgcgcc cgtcgttcga tgtttcctga 5041 cccaagcgca cacacataca ctacctctgt cggggcagga taagagagac actggagaca 5101 cacgtctaca cacagatgac acacaccaga accagaccaa aatgtaggcg aaggcttttc 5161 acttggatgt ggaaatttcg agagatgcga ggaatgagga aggagattgt ggggaagcta 5221 ggagaactgc taggagaaag cattaaatat tttacattgt attacataaa ttatttattc 5281 tgactatacc aacccacaca cacaaccaca tatggatatt tttgttatta agttgtatgt 5341 atttattatc attaatatcg agttagtcaa cattctgtgt acagttttcc gctcgctttt 5401 gctcttgtcg ctggagaaat tctcggaacc cccgtaacta aatgtttctt atgtagactg 5461 ttactaaaat gtaattgtgg gtgccgccga aatttatccg aactgacatg caaacatttt 5521 ctgaaactag tacttagcct ggtgcaaaaa tttagttatg tggtatttta aattagccat 5581 ctacataaaa cattgggtac aaaccaactc tgaatcgcca aattatgtct accgacttta 5641 aattctaatt atgtccgata caatattttt atctccacta aacttacaac cagtttaaga 5701 atattttgga atcggaattt aattacaaat ttatctacga ggatatcttg agctataggt 5761 ttctcttctc gtttcatata tactcaaaat taaagaaaat cccaacccat ttagtctata 5821 aactcagtta tatgtaaaac catgctaaac ctatcgatgc tcaggcaaaa actttgcgca 5881 cagacagacc aacttaacta tttaacactt cgaaatgaga tttctggctc cagaggcgga 5941 aaactggaag actttacatc gatttttgca ggcgctgttg gtatattttt ttagttgttg 6001 ttagtttttg taagcgaagg aaaaaacatt ttgtactcct aatttgacaa ttattttttt 6061 tgttttcgtt ttattttgga aatttgattt cagagttacg attttctgtt tactttatat 6121 tattcagctg aaaacagtta aaaagaatct ttagggaagg aacaacagaa acaacaacaa 6181 gtcacattat attatattat ataatatata tatattatat atatacgtag ttctatatat 6241 aaacaaatat ccttatcaat ataaatattt ttttttcgta atcttaattt aatttagttg 6301 tagcgttttt agttactaag ttgatattgc taatagtttg ttttatacca aatacacaaa 6361 aaaaagaaca ttaagcgatt ctaagaaaaa cctatttatg cacacccaaa cacacataca 6421 tacatctatg cacaagtgta tagttttata tatatgaata tatatgaatt atatgtatta 6481 tttttttaaa ccaattacct gttctttttt tattttttaa tgtgacttga ggacgggcag 6541 agttattttc ggggcctact ttcgggctgt actttccaga tatcccggat gcgtgggcgt 6601 gggcggttag gtgtaggcta gtaggcgtgg caatgtgtag agctatggat aaagcaacgt 6661 aggacaagag atgctgtcga cgctttggaa tagaatgtgc aaaagataga aatcgtatat 6721 aaatacacac atatataggg agcatagcca gacatatgat acaagtatac aaaaacagga 6781 actcacaact tacacaacaa cactcacacg cacacgtaca cacaaggata atacgatcca 6841 ttaatacata tgtataccta gtgaagcagg acgatgaaag aattcaatta gtgaaaaatc 6901 aacaagcaac cacaaattgt agcctaaatt accaaaacaa acaaacaaac aaacaatata 6961 tttgtatgcc atatatatga tatatatata tatacacaat acatatacat ttacatacac 7021 atatacatat acataatata tatagatatc tatatatata ctggagcctt gttcctgctg 7081 ggccaataca aggaaggact catatatatt tctataggca aattgaagga accacaggaa 7141 gcaaccacaa ccgaaaccga aagcaattca aaccagtttg tattatagat ggggagacgt 7201 cgcaaaaaat aagtatggcg ttcttcacag cagagtacag tcaacccaca ctaacagaaa 7261 cacacgaaca cacacactaa tgcctctgga tacaagttaa atgattaaca tgttttttcg 7321 ctggtttctg ttggattaat gaaaagccaa tgtggatccc ctattgtatt ttgtagagaa 7381 atctaaaact aaaacaaaaa accaaaactg aaaacaaaac tcgtttgaaa atcatttcat 7441 tccaatctgg tcgaagtcct tcgactcgat aatttccata tagttgttag ttacacatac 7501 tgtactgtct gtaagcctac agtctgatct ttttcttcaa tgtttgcttt aagaaataca 7561 ttttgaataa aattgtaacg taaaactgaa aatccacaac acaacaaatg agaaaatgaa 7621 aaatgaaact taaccagagc aagaacaaaa taagtaagaa aaaaaccagg aagaacaaga 7681 acaaaacaag atcaataaaa caaatccaat ataattattg tttattacta gactaataaa 7741 tgtatttttt ggcagattaa a