PREDICTED: Drosophila takahashii forkhead domain 19B (fd19B), mRNA.

LOCUS       XM_017141416            1285 bp    mRNA    linear   INV 09-DEC-2024
ACCESSION   XM_017141416
VERSION     XM_017141416.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017141416.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1285
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1285
                     /gene="fd19B"
                     /note="forkhead domain 19B; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     Protein"
                     /db_xref="GeneID:108057242"
     CDS             331..1161
                     /gene="fd19B"
                     /codon_start=1
                     /product="fork head domain transcription factor slp1"
                     /protein_id="XP_016996905.3"
                     /db_xref="GeneID:108057242"
                     /translation="MDRAQSVDSSSTSDTSILFIIMAMNTTPVFQSSFSIRSLLSVDK
                     KVDAPIPNPNPNQSGSENTSEDEAKSSSSSPIGSVKSNSTAKPAFTYSALIVMAIWSS
                     SEKRLTLSGICKWIADNFPYYRSRKNVWQNSIRHNLSLNPFFVRVPRALDDPGRGHYW
                     ALDPYAEDLSIGETTGRLRRSQMGRMPKVTGHGHPYQRIPQPHYTHYSHPMKSHGAYF
                     PSSLVDHHHHQAAMLQHYHVIMHRHQMMQHTQLQQPHHSHLQEQHPPLRHHHYHFHQE
                     "
     misc_feature    <424..>999
                     /gene="fd19B"
                     /note="Transcription factor of the Forkhead/HNF3 family
                     [Transcription]; Region: COG5025"
                     /db_xref="CDD:227358"
     misc_feature    586..834
                     /gene="fd19B"
                     /note="Forkhead domain; Region: Forkhead; pfam00250"
                     /db_xref="CDD:459732"
     misc_feature    <1003..>1155
                     /gene="fd19B"
                     /note="N-terminal domain of Kruppel-like factor (KLF) 1,
                     KLF2, KLF4, and similar proteins; Region: KLF1_2_4_N;
                     cl41729"
                     /db_xref="CDD:425360"
ORIGIN      
        1 tcttaggtca gcagttcgac aatatcgata ataggtgttc ccgaagagga taggcgccgc
       61 gggggaggac gaggtcccca ggggcaggta aaattaatcc cattcagcaa ccgctagtcc
      121 tgcgctaatc cgaaaacgtt tgcgactccc gttcgtggat gtggatcaat gaatgaatcc
      181 gaaggctttc atgaatctgt ttgccattaa gctcgttgcg cggcgattaa atcgggggga
      241 tcgctaatcc tgggccaagg atatgcgggt aatcctttcg ggcagccgcc tccgcctccg
      301 cttgtcccgc ataaatagat ctgtctgccg atggacaggg cacagtcagt cgacagcagc
      361 tcaaccagtg acacaagcat tctatttatt attatggcca tgaatacgac accggtcttt
      421 cagtccagct tctccatccg atccttgcta tctgtggata agaaggtgga tgccccgatt
      481 ccgaacccga atccaaacca atcgggttcc gaaaatacct ccgaagacga ggccaagagt
      541 tcgagttcca gtccgatcgg ttccgtgaag agcaatagca ctgccaagcc ggccttcacc
      601 tacagcgccc taattgtgat ggccatttgg agcagttcgg agaagcgctt aaccctcagc
      661 ggcatttgca agtggattgc agacaacttt ccgtactatc gcagtcggaa gaacgtctgg
      721 cagaattcga tacggcacaa tctcagtctg aatccgttct ttgtccgcgt gccacgggcc
      781 ctcgatgatc ccggtcgcgg tcactactgg gccctcgatc cgtatgccga ggatctgtcc
      841 attggcgaga cgacgggacg cctgcgccgc agccagatgg gcagaatgcc gaaggtgacg
      901 ggacatggtc atccctacca gcggatacca cagccacact acacccacta cagccatcca
      961 atgaagtcgc atggcgccta ctttcccagt tccctagttg accatcatca tcaccaggcc
     1021 gccatgctgc agcactacca tgtcataatg cacaggcatc agatgatgca acacacccaa
     1081 ctgcaacagc cacaccactc gcatctccag gaacaacatc cgccactgcg tcatcaccat
     1141 tatcacttcc accaggagta acgtctgcag ccaggacaat cggaaattcg gaaagtaccc
     1201 tcttggcgta gaacgcggcg aatattgttg gcctttgctg gggtcgtgat aataatcaaa
     1261 tttataaaat aaaaattata tacta