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LOCUS XM_017140744 1697 bp mRNA linear INV 09-DEC-2024 (LOC108056770), mRNA. ACCESSION XM_017140744 VERSION XM_017140744.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140744.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1697 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1697 /gene="LOC108056770" /note="transcription factor IIIA; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 1 Protein" /db_xref="GeneID:108056770" CDS 53..1234 /gene="LOC108056770" /codon_start=1 /product="transcription factor IIIA" /protein_id="XP_016996233.2" /db_xref="GeneID:108056770" /translation="MPPGRQIASDSDMETVLEEFKERQGRRNSIGSAKYACSVPKCEA TFKRLDQLDRHEYHHTGIKKHACSYEGCDKTYSIVTHLKRHLRSTHERPEAAAKKTVK CALEECGKMFISVSNMTRHMRETHESPRVYRCGHCGANFSQKLKLKRHEIREHTLEYP FACSKCSRGFYQEWQRQSHEPSCKQYECPGCPLKFDKWTLYTKHCRETLHGRNRHKCD RCECAFDKPSDLKQHIEVRHKEAKEKQPEEESAFTCTEEGCGRSYSYLRNLRQHVLTA HSGRRFECQSVDCGRCFSSAQNLAKHLLRDHRDVQKSQKKSDQRAKLNPRKRRRDAGR SKHSRLAKLACLQLDKEDEEAVRERQPLALEKVTQSLAEDPVEELLAQTLQEAEEVEQ E" misc_feature 170..>331 /gene="LOC108056770" /note="FOG: Zn-finger [General function prediction only]; Region: COG5048" /db_xref="CDD:227381" misc_feature 170..229 /gene="LOC108056770" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 251..502 /gene="LOC108056770" /note="C2H2-type zinc ribbon; Region: zf-C2H2_8; pfam15909" /db_xref="CDD:464935" misc_feature 251..322 /gene="LOC108056770" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 368..430 /gene="LOC108056770" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 452..517 /gene="LOC108056770" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 701..766 /gene="LOC108056770" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature order(716..718,722..724,728..730,734..739,746..751, 758..760,833..835,839..841,851..856,863..868,875..877, 923..925,929..931,935..937,941..946,953..958) /gene="LOC108056770" /note="putative nucleic acid binding site [nucleotide binding]; other site" /db_xref="CDD:275368" misc_feature 812..883 /gene="LOC108056770" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" misc_feature 902..961 /gene="LOC108056770" /note="C2H2 Zn finger [structural motif]; Region: C2H2 Zn finger" /db_xref="CDD:275368" ORIGIN 1 ctggcaaccc tgcgcgaagc gagtttgtaa tttttaagta attcctttaa aaatgccgcc 61 cggaaggcaa attgcgagcg acagcgacat ggagaccgtg ctggaggagt tcaaggagcg 121 ccaggggcgc cggaacagca tcgggtcggc caagtacgcc tgcagcgtgc ccaaatgcga 181 ggccaccttc aagcggctgg accagttgga ccgccatgag tatcaccaca cgggaattaa 241 gaagcacgcc tgctcgtacg agggctgcga caagacgtac tccatcgtga cgcacctgaa 301 gcgccacctg cgcagcaccc acgagcgtcc cgaggcggcg gccaagaaga cggtgaagtg 361 cgcgctcgag gaatgcggca agatgttcat ctcggtcagc aacatgaccc gccacatgcg 421 cgaaacgcac gagagtccgc gcgtctatcg ctgcggccac tgcggcgcca acttctcgca 481 gaagcttaag ctgaagcgcc acgagatccg ggagcacacg ctcgagtatc ccttcgcgtg 541 ctcgaagtgc tcgcgcggct tctaccagga gtggcagcgg cagagccacg agcccagctg 601 caagcagtac gagtgccccg gctgcccgct gaagttcgac aagtggacgc tgtacacgaa 661 gcattgccgg gagacgttgc acggaaggaa tcgccacaaa tgcgaccgct gcgagtgcgc 721 cttcgacaag ccgagcgatc tcaagcagca catcgaggtg aggcacaagg aggccaagga 781 gaagcagccg gaagaggagt cagctttcac ctgcaccgag gagggctgcg gccggagcta 841 ctcgtacctg aggaatctcc gccagcacgt gctgaccgcc cattcgggcc gacgtttcga 901 gtgccagagc gtggactgcg gtcgctgctt cagcagtgcc cagaatctgg ccaagcatct 961 gctcagggac cacagggatg tccagaagag ccagaagaag agcgaccaga gggccaagtt 1021 gaatccccgc aagcgcaggc gcgacgccgg acgcagcaag cactcgcgcc tggccaagct 1081 ggcctgcctg cagctggaca aggaggacga ggaggcggtg cgcgagcgcc agccgttggc 1141 cctcgaaaag gtcacccagt cgttggcgga agaccccgtc gaagagctgc tggcacagac 1201 gcttcaggaa gcagaggaag tggagcagga gtaaaagaaa agggaaggaa ggtcaggtga 1261 aaaccggaat gaggctgaaa tacctttgag tcgaaaggaa aatggagcga aaattaagtg 1321 aaatacacag aagaactcaa gaagttgtac acaaaacaca aatcaagacg caaaatcatc 1381 aagaaactgc caaagacaca aaaatttaaa cacaaaatga tgaagaagtg caaagcatca 1441 gaaaacagac gaaggtaact tttacatatt tataaaaaac gactctaaat atacagaaaa 1501 taaactagga cctttcttcc ttccctacta gttaagttaa ttaattacta atcatcgccg 1561 cctggagcgg attaattaat cacttagaat cccattccat gactagaatt ttagaaaata 1621 cccggagtag aatattattt atattaaata aaacataagt actccttact tctcagaaaa 1681 aaaaaccaaa tttcaag