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LOCUS XM_017140733 2656 bp mRNA linear INV 09-DEC-2024 ACCESSION XM_017140733 VERSION XM_017140733.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140733.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2656 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2656 /gene="RunxB" /note="Runt related B; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108056762" CDS 492..2435 /gene="RunxB" /codon_start=1 /product="uncharacterized protein RunxB" /protein_id="XP_016996222.2" /db_xref="GeneID:108056762" /translation="MHISAEVSSTTSNQIQQQQQQHQQQQQQHQTLQQQQQQQQTATT TTTTKRRNAESSSANNNNNNNNNNTSTTNNNNNSTTNNNNNNNNNVKTKPVDTSPYLT PENLIERTVDVLLAEHPGELVKTGSPHVVCTTLPTHWRSNKTLPIAFKVLALGEVMDG TIVTIRAGNDENFCGELRNCTAVMKNQVAKFNDLRFVGRSGRGKSFTLTIVISTNPIQ IATYTKAIKVTVDGPREPRSKVRHQGFHPFAFGPQRFGPDPLMAGLPFKLPGFAHHLV GMHSHLHAPDWRAHMALGGRPAAFPAAPFFTHHAAAFPSATGLRGLSGDNPQHQQLAT VGAAHSTTSPEGSPTTTTTSGTQLSAFVQPPMTSSPPVPVTSLHHHHHHDNNNDNNNN NNIDAGFESDSISVTGSPRKSLGGSPLTHDEEEAEAEADADEAETEVEVNNGGGMQQG GSLGESSPGNGGAFTALIQRSGKNPSELFGHTSHFAPSGHTFNPALAAQLFLQSPLLP QSSQWLYTQLYGSYSDLPWLRNAAAAAAANISQENHPNPNVHPPLGSGSGGNPEHDGV NLIKRCVTLITHNPPDAENANPNASPPVSSTRRSPSPVETIDLDDVSTTSRSASGSSG GAGGGGPIRTRTPKPSADVWRPY" misc_feature 834..1208 /gene="RunxB" /note="Runt domain; Region: Runt; pfam00853" /db_xref="CDD:459963" ORIGIN 1 ttcgatcgcc agtctctcag cccctctatc tatatatgtg tgttagtgtc tctgagtccc 61 tgcttcagtg tgtgcgtgtg ccgtgcgtgt gtgtcggtgt gtgtgtgtgt gtgccggtgg 121 ctaaataaca aaattgccaa attaccacaa ttaaaaaaaa gctagaaatc gcaaaaaagt 181 ctggccaaaa ttccataatt tttttaaggt gcttgtgttg taaaaaaaga atacagaaac 241 tacatttggt gctgtgctgg aagaaaaaag aaatatacct aaaacttcaa tagaaaaatt 301 gaccaaatga gctgacaatg atcggattga aagcgtcgac tctttgaggc aggcattgaa 361 atcaaaccga aaacccacga aacgaaaccc gccggcaact gaatctgaat cagaatcaga 421 atccactgaa tatatactgg cggccaaaga gaggccctga aataccttgt gcccagctag 481 cagctgcaat aatgcacatt tctgctgagg tcagttcgac cacctcaaat caaatacagc 541 agcagcagca gcaacaccag cagcaacagc agcaacatca gacgttgcaa cagcagcagc 601 aacaacaaca gacagcaaca acaacgacca caacgaagcg gcgaaatgct gagtcctcct 661 ctgccaacaa caataataat aacaacaaca acaataccag caccaccaac aacaacaaca 721 acagcaccac gaacaacaac aacaataata ataataatgt taaaacaaag cccgtggaca 781 cgagtcctta cttgaccccc gagaatctca tcgagcgcac cgtcgacgtc ctccttgccg 841 aacatcccgg cgagctggtc aagacggggt caccacatgt ggtctgcacc actttgccca 901 cgcactggcg ttcaaataaa acgctgccga tcgccttcaa ggttttggcc ttgggcgagg 961 tcatggacgg gactatagtg accatcaggg cgggaaatga tgagaacttc tgcggggagc 1021 taagaaactg tacggcggtg atgaagaatc aggtggccaa gttcaacgat ctgcgatttg 1081 tgggcaggag cggaaggggc aagagcttca ccctgacgat tgtcatctcg acgaatccca 1141 tccagatagc cacctacacg aaggccatca aggtgaccgt ggacgggcca agggagccca 1201 gatcgaaggt gcgacaccag ggattccatc cgttcgcctt tgggccacaa cgctttggac 1261 cggatccact tatggccgga ttgcccttca agttgccagg atttgcccat catttggtgg 1321 ggatgcacag tcacctgcat gcgcccgatt ggcgcgccca catggccttg ggcggacgcc 1381 cggccgcctt tcccgccgcc ccctttttca cccaccatgc ggcggccttt cccagcgcca 1441 ctggactgcg tggactgagt ggagacaacc cgcagcatca gcaattggcc accgtgggcg 1501 cggctcatag caccaccagt ccggagggat cccccaccac caccaccacg agcggcactc 1561 agctgtcggc ctttgtccag ccgccgatga cgtcatcgcc gccagtccca gtgaccagtt 1621 tgcatcatca tcatcatcat gataataata acgacaacaa taataataat aacattgatg 1681 cgggctttga aagcgatagt atttcggtga cgggatcgcc gcggaaaagt ctgggcggct 1741 cgccgttgac ccacgacgag gaggaggcgg aagcggaggc ggatgcggat gaagcggaaa 1801 cggaagtgga ggtcaacaat ggcggcggta tgcagcaggg cggctctctg ggtgaaagtt 1861 caccgggcaa cgggggagcc ttcaccgctt tgatccaacg cagtggcaaa aatccctcgg 1921 agctattcgg ccacaccagt cattttgcgc ccagcggtca caccttcaat cccgctctgg 1981 ccgctcaact ttttctccag agtcctctgc tgccccaatc gagtcaatgg ctatataccc 2041 aactatatgg cagctacagt gatttgcctt ggctacggaa tgcggcagct gcagcggctg 2101 cgaatatcag ccaggaaaat catcccaatc ccaatgtcca tccccctctg ggcagcggca 2161 gtgggggaaa tcccgagcac gatggggtga atttgatcaa gaggtgcgtt accctgatca 2221 cccacaatcc gccggatgcg gaaaatgcca atccgaatgc ctcgccgccg gtcagttcga 2281 cgcgtcgatc gccatcgccc gtggagacca tcgatttgga cgatgtcagc accacctcgc 2341 gatcggccag tggttcaagt ggtggggcag gcggtggtgg acccattaga acgcgaaccc 2401 ccaagccatc ggcggatgtc tggcgtccct actagcggct ggcggccgcc gccttgctcg 2461 gcacttgtct ggcggcccaa ggtcgggagg gaggtcacaa ggaggaggag gggcagcgaa 2521 acacttagct ctcttaaaat aaaaaataag aaaaataata caaataatta agaaaataat 2581 aaagagacag cagcggagct tgtggtgttg tgaatagtcg ccatatcgca gctggcgggt 2641 attgctactt gaattt