Unfortunately due to lack of commercial feasibility, the SkyBLAST service has been suspended from December 1st, 2025.
All subscriptions for paid accounts have been paused. For further information or enquiries, please email [email protected]
LOCUS XM_017140729 2399 bp mRNA linear INV 09-DEC-2024 transcript variant X1, mRNA. ACCESSION XM_017140729 VERSION XM_017140729.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140729.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2399 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2399 /gene="run" /note="segmentation protein runt; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 4 Proteins" /db_xref="GeneID:108056758" CDS 210..1751 /gene="run" /codon_start=1 /product="segmentation protein Runt isoform X1" /protein_id="XP_016996218.2" /db_xref="GeneID:108056758" /translation="MHLPAGPTMVANNTQVLAAAAAAAAAAAAVAQAQVPQSGSSSGS QNNLANTSTHSASSTGSSTPDLSTNNNNTSTSSSNPPNSAKMPSSMTDMFASLHEMLQ EYHGELAQTGSPSILCSALPNHWRSNKSLPGAFKVIALDDVPDGTLVSIKCGNDENYC GELRNCTTTMKNQVAKFNDLRFVGRSGRGKSFTLTITIATYPVQIASYSKAIKVTVDG PREPRSKQSYGYPHPGAFNPFMLNPAWLDAAYMTYGYADYFRHQAAAQAQAQVHHPAL AKSSASSVSPNPSNPSVVVPTSSSSSSAAAVQSADYPHPGAPAVGQPGAMMPSPPGPG ALPHAMPQFPFNHVAAAAAAKAVGGTPHAFHPYNFASAAVGLRARNAALHHQQQQHLQ QDGAPIVHVSPASSRPSSSSPQQQQQHVLLKLNTSIETSSIHEQSASDGDSDDEQIDV VKSEFDLDKSLDVTPLRMRCDLKAPSALKPLYHETSSGLQSSPETTTKIKSAAVQQKT VWRPY" misc_feature 498..884 /gene="run" /note="Runt domain; Region: Runt; pfam00853" /db_xref="CDD:459963" ORIGIN 1 ttagcgtgtc gagaacgcac atagcaatcg aaaaaccgta tatcgaaaat tcgagttcga 61 aaatttgaaa aaagcattcg acatcgaaaa tcgcgaaatc aattttttct aagtgattac 121 cagaaaaaca aaaaaaaaca gagaaaaaag tgaagtgaaa aatacacaga gaaaaaccaa 181 aggattactc tctctttcgg atacgaaaca tgcatctgcc agcgggtcca acgatggtgg 241 ccaataacac acaggtcctg gcagccgccg ccgccgctgc cgccgccgca gccgccgtgg 301 cccaagcaca ggtgccccaa agtggcagca gctcgggatc ccagaacaac ctggccaaca 361 ccagcaccca ttcggccagc agcacgggca gctcgacgcc cgatctcagc acgaacaaca 421 ataacactag caccagtagc agcaatcccc cgaactccgc caagatgccc tcctcgatga 481 ccgacatgtt cgcctcgctg cacgaaatgc tccaggaata ccacggcgaa ctggcccaga 541 cgggctcccc ctcgatcctg tgcagcgccc tgcccaatca ctggcgatcg aacaaatccc 601 tgcccggcgc cttcaaggtg atcgccttgg acgatgtccc cgatggcact ttggtctcga 661 tcaagtgcgg caacgatgag aactactgcg gggagctgag gaactgcacc accacgatga 721 agaaccaggt ggccaagttc aacgatctgc gcttcgtggg aaggagcggt cgcggaaagt 781 ccttcacgct gaccatcacc atcgccacat atccggtgca gatcgccagc tacagcaagg 841 ccatcaaggt gaccgtcgac gggccgcggg agccaagaag taagcaaagc tatggctatc 901 cccatcccgg cgccttcaac cccttcatgc tgaaccccgc ctggttggac gcggcgtaca 961 tgacctacgg ctatgcggac tacttccgcc accaggcggc ggcccaggct caggcccagg 1021 ttcatcatcc tgccctggcc aagtcctcag cctcctcggt gtccccgaat ccttcgaatc 1081 cctcggtggt ggtgcccacc agcagctcct cctcctccgc ggcggcagtt cagtccgcgg 1141 actatccaca tcccggagcg ccggcagtgg gtcaaccggg cgccatgatg ccctcgccac 1201 cgggaccggg tgccctgccc catgcgatgc cccagttccc gttcaaccat gtggcagccg 1261 ccgctgccgc gaaggcggtg ggcggcaccc cgcacgcctt ccatccgtac aactttgcca 1321 gcgcagccgt cggcttgagg gcgcgaaatg cggcactgca tcaccagcag cagcagcacc 1381 tccagcagga cggcgccccc attgtccacg tcagtcccgc ctcctcgcgg ccctcgagct 1441 cctcgccgca gcagcagcag cagcacgtcc tcctcaagct gaacacctcc attgagacca 1501 gctcgataca cgagcagtcc gccagcgacg gcgactcgga tgacgagcag atcgatgtgg 1561 tcaagtccga gttcgatttg gacaagagcc tggatgtgac gccgctgaga atgcgctgcg 1621 acttgaaggc gccctcggcg ctgaagcccc tgtatcacga aaccagctcg ggactccaat 1681 cctcgccgga gaccacgacc aaaatcaaga gcgccgccgt ccagcagaag accgtgtggc 1741 ggccctatta aaaccagggt tcgatctcaa ggtttttggg agcaggagaa aaaattatac 1801 aaagtgataa aacagcggcg gcgcagagcg gcaagcgggc aaaaaattat aattgtgata 1861 tagtgttata agttgatgag gaagatgaag acgcctccgg ccggcaaacg gagcagcaaa 1921 aaaaaaaatc agaccaggac tcgaactcga acccaaccct ggaaactcag actccggcga 1981 agttttatgc tcggttaaca taaaatcgtg cgacgagttt cgagtttcga caggccctcg 2041 tttttcacca ggattttcta caaatcccag cggaaaaaag aaaaatccca actcaatcca 2101 aaaaccctaa aaaactttag ttaaatttaa tttcacacac attttgtaca tagctaaaaa 2161 ctagttgtaa cactcattac tatttttttt tgaagaaact cctttttttt cgatggataa 2221 tatgcgaatt tagctatttt taatctttat gtttaaacta gtcgtctaag tgagaaatca 2281 atttttttgt ctagcccgta agttttagcg cgaaaagaaa aatctaacac aaaaaatcga 2341 atttgaaaca aaaccaaata aaaaacaaaa atcacacacg aaaagtattt acaaaaaaa