PREDICTED: Drosophila takahashii TBP-associated factor 9 (Taf9),

LOCUS       XM_017140726             956 bp    mRNA    linear   INV 09-DEC-2024
            mRNA.
ACCESSION   XM_017140726
VERSION     XM_017140726.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017140726.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..956
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..956
                     /gene="Taf9"
                     /note="TBP-associated factor 9; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 3
                     Proteins"
                     /db_xref="GeneID:108056756"
     CDS             81..908
                     /gene="Taf9"
                     /codon_start=1
                     /product="transcription initiation factor TFIID subunit 9"
                     /protein_id="XP_016996215.2"
                     /db_xref="GeneID:108056756"
                     /translation="MSGEKAEKAKISAQIKHVPKDAQVIMSILKELNIQEYEPRVVNQ
                     MLEFTFRYVTCILDDAKVYANHARKKTIDMDDVRLATEMTLDKSFTGPPARHVLAKVA
                     DVRNAMPLPPIKPHCGLRLPPDRYCLTGVNYKLRATNQPKKMTKSAVEGRPLKTVVKP
                     VSSANGPKRAHSVVSKQQVVTIPKPVIKFTTTTTTKTVASSSGSGGGGGLEVKSEPSG
                     VGGGDLKMEVDSDAAAVGSIASGSGSGAGNASGASSSGVGVAVKREREEEEFEFVAN"
     misc_feature    126..488
                     /gene="Taf9"
                     /note="Transcription initiation factor IID, 31kD subunit;
                     Region: TFIID-31kDa; pfam02291"
                     /db_xref="CDD:460525"
     polyA_site      956
                     /gene="Taf9"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cgccacaaag tgagtggcgt tttacaacat tgcttccgta aacaataatt tttcaattga
       61 acaaaacaat aactaacaaa atgagcggcg agaaggccga aaaggccaag atcagtgccc
      121 aaataaagca cgtgccgaag gacgcgcagg tgatcatgtc cattctgaag gagctgaaca
      181 tccaggagta cgagccgcgc gtggtcaacc agatgctgga gttcaccttc cgctacgtca
      241 cctgcattct ggacgacgcc aaggtgtatg cgaaccatgc gcgcaagaag accatcgaca
      301 tggacgacgt gcgcttggcc accgagatga cgctggacaa gagcttcacc ggtccgccgg
      361 cccgtcatgt gttggccaag gtggccgacg tgcgtaacgc catgcccctg ccgcccatca
      421 agccgcactg cggtctgcgc ctgccccccg atcgctactg cctcaccggg gtcaactaca
      481 agctgcgggc cacaaatcag cccaagaaga tgaccaagtc ggcggtggag ggacgtcccc
      541 tgaagaccgt cgtcaagccg gtctccagtg ccaatgggcc gaagagagcc cactcggtgg
      601 tgtctaagca gcaggtggtg accattccca agcccgtcat caagttcacc acaacgacca
      661 ccacgaaaac ggtggccagc tccagcggat cgggtggcgg aggaggtctg gaggtgaaga
      721 gcgagcccag cggcgtcggg ggaggagacc tcaaaatgga ggtggacagc gatgcggcgg
      781 ccgtgggcag catcgccagc ggatcgggat caggagcggg aaatgccagc ggggcatcct
      841 cctccggcgt gggagtggcc gtcaagcggg agcgcgagga ggaggagttt gagtttgtgg
      901 ccaactagca aatcgaacag agtaacctaa aatatatttt caaattcaga cctaaa