PREDICTED: Drosophila takahashii replication factor C subunit 4

LOCUS       XM_017140725            1349 bp    mRNA    linear   INV 09-DEC-2024
            (LOC108056755), mRNA.
ACCESSION   XM_017140725
VERSION     XM_017140725.3
DBLINK      BioProject: PRJNA1194641
KEYWORDS    RefSeq.
SOURCE      Drosophila takahashii
  ORGANISM  Drosophila takahashii
            Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta;
            Pterygota; Neoptera; Endopterygota; Diptera; Brachycera;
            Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_091683) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Dec 9, 2024 this sequence version replaced XM_017140725.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Full annotation
            Annotation Name             :: GCF_030179915.1-RS_2024_12
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Gnomon; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 12/07/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1349
                     /organism="Drosophila takahashii"
                     /mol_type="mRNA"
                     /strain="IR98-3 E-12201"
                     /db_xref="taxon:29030"
                     /chromosome="X"
                     /sex="female"
                     /tissue_type="Whole fly"
                     /dev_stage="Adult fly"
                     /collected_by="Originally obtained from EHIME-Fly"
     gene            1..1349
                     /gene="LOC108056755"
                     /note="replication factor C subunit 4; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 Proteins"
                     /db_xref="GeneID:108056755"
     CDS             73..1134
                     /gene="LOC108056755"
                     /codon_start=1
                     /product="replication factor C subunit 4"
                     /protein_id="XP_016996214.2"
                     /db_xref="GeneID:108056755"
                     /translation="MQAFLKTGKSTAGAGEKSQGAAAARRKPPAPWVEKYRPRNVDDV
                     VEQSEVVAVLRKCVEGGDLPNMLLYGPPGTGKTSTILAAGRQIFGDMFKDRILELNAS
                     DERGINVVRTKIKNFSQLSASSVRPDGRPCPPFKIIILDEADSMTHAAQSALRRTMEK
                     ESRSTRFCLICNYVSRIIVPITSRCSKFRFKALGDDQVIARLKHICEAEGVRIEEEAY
                     GSIVKISGGDLRRAITTLQSCYRLKGPEHLINTADLFEMSGVIPEYYLEDYLEVCRSG
                     NYERLEQFVREIGFSAYSVGQMMEQFVEFIVHHQGLNDPQKATICDKLGECCFRLQDG
                     GSEYLQIMDLGCCIILALK"
     misc_feature    166..1104
                     /gene="LOC108056755"
                     /note="replication factor C small subunit; Reviewed;
                     Region: rfc; PRK00440"
                     /db_xref="CDD:234763"
     polyA_site      1349
                     /gene="LOC108056755"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 gacgcgcggc aaacttttgc atctgcgctt tttatttact atattatttt gttaatttac
       61 gtggattgcg tgatgcaggc ctttttgaag acgggcaaat cgacggcggg agctggggag
      121 aagagccagg gagctgcggc ggcgcggcgc aaaccgccgg ctccctgggt ggagaaatac
      181 cggccgcgca acgttgacga tgtggtggag cagtccgagg tggtggccgt gctgcgcaag
      241 tgcgtcgagg gcggggacct gcccaatatg ctgctctacg gccctcccgg cacgggaaaa
      301 accagcacga tcctggccgc cggccggcag atcttcggcg acatgttcaa ggatcgcatc
      361 ctcgagctga acgcctccga cgagcgcggc atcaatgtgg tgcgcaccaa gatcaagaac
      421 ttctcgcagc tctcggcgag cagcgttcgt ccggatggcc ggccgtgtcc gcccttcaag
      481 atcatcattc tcgacgaggc cgactcgatg acccatgccg cccagtccgc gctgcgtcgc
      541 accatggaga aggagagccg cagcacccgc ttctgcctga tctgcaacta tgtctccagg
      601 attattgtgc ccatcacctc gcgctgttcc aagtttcgct tcaaggcgct gggcgacgac
      661 caggtgattg cccggctgaa gcacatttgc gaggcggagg gcgtgaggat cgaagaggag
      721 gcctacggat cgattgtcaa gatctctggc ggagatctgc gcagggccat caccaccctg
      781 cagtcctgct accgcctgaa gggccccgag cacctgatca acacggccga tctgttcgag
      841 atgtcgggcg tgatacccga gtactatctg gaggactacc tggaggtctg tcgctcgggc
      901 aactacgagc gcctcgagca gttcgtgcgc gagatcggct tttccgccta cagcgttggc
      961 cagatgatgg agcagtttgt cgagttcatc gtccaccatc aggggctgaa tgatccgcag
     1021 aaggccacca tctgcgataa gttgggtgaa tgctgttttc gcctgcagga cggcggttcc
     1081 gagtacctgc agatcatgga cctcggctgc tgcatcatct tggctctgaa gtgagcactt
     1141 tcctcgatat gtatgtactt tttttttgcg acagaagtct aaaatatatt ttctatttaa
     1201 tttgaatagc tggtccttga aattttgtat atttaagtct taaaaaccag ttttcctgct
     1261 actaaatatt aaaaagcata gaactgaatt ctctttaagt taatctttac aaattaaaat
     1321 ggagttccca ctttagggac taagaaata