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LOCUS XM_017140724 1938 bp mRNA linear INV 09-DEC-2024 S30 (mRpS30), mRNA. ACCESSION XM_017140724 VERSION XM_017140724.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140724.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..1938 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..1938 /gene="mRpS30" /note="mitochondrial ribosomal protein S30; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108056754" CDS 108..1751 /gene="mRpS30" /codon_start=1 /product="large ribosomal subunit protein mL65" /protein_id="XP_016996213.2" /db_xref="GeneID:108056754" /translation="MLKLNLVGQLRSTYRRCLATGQSLQVNPAEDVEPAYPVIRDPSF KARKQKDAADWHEEIRQVATVEEKMIKINMPRYYGYKVVDFNDSKIPYNALPLTQHYT RTVLEDLVVPSVSASESPEDASEDSLLKATREEVIEALEFAHDYYRHLETPTSPVERE RLLTQIIVEQLNRTLLQALGEEYKHLAEAEVDYNPRHEAFWAVGGVDPPKNVQQSKKG REWQKEEANESVDRLVQYKGRPYLSLRHRRQLAPWKTPAESENPALSQQLPRFRHDPR TLGYSTGHQHATNVPGYWPKGNEQNFGLLSFQSRAHLQLRPQSFGEQDQQEALHALAI KSSYAWLLAQANYNGFNTYNELTYPLNTQTVITNGREWSFYEYQLNTLLLHGSHEQEN PRVNFCRGTRPLPLYAEISEQGKCVDFNDTTLRQLLNFYVNVPTVQRSLEEQQPYVAS DISAYENEEQRDFISKTFKHLASNRPRHLELPEIYLWEKLYKIDNKNRAMEAKRRFFE LDINPWQRTLDTHDKEYVPRAARPGVRKQENRFKKTYYP" misc_feature 135..1400 /gene="mRpS30" /note="Mitochondrial 28S ribosomal protein S30 (PDCD9); Region: PDCD9; pfam07147" /db_xref="CDD:462101" polyA_site 1938 /gene="mRpS30" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ctctaatagt aatgacataa ccccactccc gttgattccc aagtaaattt taatttcttc 61 gaaaacataa atcgcaactt gcgtttagct tgacgttttt acgcgagatg ctgaagctaa 121 acctcgtcgg ccagttgcga tcgacgtaca ggcgctgctt ggccaccggc cagtcgctcc 181 aggtgaatcc cgccgaggat gtggagccgg cgtacccggt aatccgggat ccctccttca 241 aagcgcgcaa gcaaaaggat gccgccgact ggcacgagga gatccgccag gtggccaccg 301 tggaggagaa gatgatcaag atcaatatgc cccgctacta cggctacaag gtggtcgact 361 tcaacgactc caagatcccc tacaacgccc tcccgctcac gcagcactac acgcgcacgg 421 ttctcgagga tctggtggtg ccctccgtct ccgcctctga atctccagag gatgccagcg 481 aggattccct gctgaaggcg acccgcgagg aggtcatcga agccctcgag tttgcccacg 541 actactacag gcacctggag actccaacta gccccgtgga acgtgagcgc ctcctgacgc 601 agatcatcgt ggagcagctg aacaggactc ttcttcaggc ccttggcgag gagtacaaac 661 acttggccga agccgaggtg gactacaatc cgcggcacga ggccttctgg gccgtcggag 721 gcgtggatcc gcccaagaac gtgcagcagt cgaagaaggg acgcgagtgg cagaaggagg 781 aggccaacga gtcggtcgat cgactggttc agtacaaggg aaggccatat ctttcgctgc 841 gccaccgccg acaattggcg ccttggaaga cgccggcgga aagcgagaat cccgcgctaa 901 gccagcaatt gccgaggttc aggcacgatc cgcgcactct gggctacagc accgggcatc 961 agcatgccac caatgtgccg ggctactggc ccaagggaaa cgagcagaac ttcggcctcc 1021 tctcgtttca gtcgcgcgcc catttgcagc tgcgaccgca gtcgtttggg gagcaggatc 1081 agcaggaggc cctgcatgcg ctggccatca aatcgtcgta cgcctggctg ttggcacagg 1141 ccaactacaa tggcttcaac acctacaacg aactgacgta tcctttgaac acgcagactg 1201 tgatcaccaa cggcagggag tggagcttct acgagtatca gttgaacacg ctgctgctgc 1261 acggcagcca cgagcaggaa aatccgcggg tgaacttctg tcgcggcacg aggccactgc 1321 cgctctacgc tgagatctcg gagcagggca agtgcgtgga tttcaacgac acgacgctaa 1381 ggcagctgct caacttctat gtgaatgtgc ccaccgttca gcggagtttg gaggagcaac 1441 agccgtatgt ggcctccgat atctccgcct acgagaacga ggagcagcgc gactttatta 1501 gcaaaacctt caagcatctg gcctcgaacc gaccgcgaca tttggagcta cccgaaatct 1561 acctgtggga gaagctctac aagatcgaca acaagaatcg cgccatggag gccaagcggc 1621 gcttcttcga gctggacatc aatccgtggc agcgaacgct cgacacgcac gacaaggagt 1681 acgtgccgcg ggcagcacga ccgggtgtcc gcaagcagga gaacagattc aaaaagacct 1741 actacccctg aataaatacg agttaagcct gttataaatc gctgcatttt ttaataaaag 1801 attcggcgga ttgaaaaaat tgatcgttag taaaacagtt tagtcctatt ttaacttgta 1861 gtttataaat ttgttttgtt tttaagattt atagaggacc ttttaattat ataaaccctt 1921 gtgccttttt gtttacat