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LOCUS XM_017140720 2609 bp mRNA linear INV 09-DEC-2024 (Efhc1.1), mRNA. ACCESSION XM_017140720 VERSION XM_017140720.3 DBLINK BioProject: PRJNA1194641 KEYWORDS RefSeq. SOURCE Drosophila takahashii ORGANISM Drosophila takahashii Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora. COMMENT MODEL REFSEQ: This record is predicted by automated computational analysis. This record is derived from a genomic sequence (NC_091683) annotated using gene prediction method: Gnomon. Also see: Documentation of NCBI's Annotation Process On Dec 9, 2024 this sequence version replaced XM_017140720.2. ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Status :: Full annotation Annotation Name :: GCF_030179915.1-RS_2024_12 Annotation Pipeline :: NCBI eukaryotic genome annotation pipeline Annotation Software Version :: 10.3 Annotation Method :: Gnomon; cmsearch; tRNAscan-SE Features Annotated :: Gene; mRNA; CDS; ncRNA Annotation Date :: 12/07/2024 ##Genome-Annotation-Data-END## FEATURES Location/Qualifiers source 1..2609 /organism="Drosophila takahashii" /mol_type="mRNA" /strain="IR98-3 E-12201" /db_xref="taxon:29030" /chromosome="X" /sex="female" /tissue_type="Whole fly" /dev_stage="Adult fly" /collected_by="Originally obtained from EHIME-Fly" gene 1..2609 /gene="Efhc1.1" /note="EF-hand domain containing 1.1; Derived by automated computational analysis using gene prediction method: Gnomon. Supporting evidence includes similarity to: 3 Proteins" /db_xref="GeneID:108056751" CDS 104..2482 /gene="Efhc1.1" /codon_start=1 /product="EF-hand domain-containing family member C2" /protein_id="XP_016996209.2" /db_xref="GeneID:108056751" /translation="MLRIPGMPLLPGTLFRDVSKGHYPKPQSLSNFQGLSMLSDRQQP PPVESGSVTVDISCPPVGAASIYPPRSGPRMPPWLAYDKKVLCFNAYFKQTLQEVYHA PYLVRRVKIYYYLEDGTLEIYEPRVDNSGIVQGCVVHRQRVPKAPPCDNEFMSLIDLN VDQTVQIFDRQYHITNCDQFTRDFLNKRGITVPDPVKSPCDPTEAFRKRQEQPKVGNL IPKNHPFAQFLKYDRQILKFQAYWDDRTEFGDVRKLEVCYYLADDTIEIKEQHIRNSG RDGPTVFLKRGRLAREFEGLTLPGQMTPMTLLNVLGTNMRNVRYCVDPLNTGNKEIHY YRERDLQIGSVINVYGRAVIITELDPFTQNYYRQRYGIQDFTPLPIPSRSDDCADHRA GERQLPPYNGWGSYEDSVGNCISVEPKPPRTDFKKFIKYDRYVLRYGAKMLSTIKANC ERIFVISYYLSDDTLQIQEIAVRNSGFLGGEFMKRTRLELPGQERFSCKQPQYYMPFN FFIGSTMSLKDFIFHIVSADEYTLMYMEHHPEIFSQANVVLIMEKVRRSLQHRMAEFV GSCVPDCTDLEKQRDVFVSFESFKGSLIGIIGNQISDHEIITLCRHFSAERSQPHACD RSTVRAAAHLELKRSLWNAREDLMEHFHHINPTNQPFLPESKVRSALRGCRLPFSLEL IDNILSILNRNECDHIEVCDLMNFIDVSCGKGCDMVPVNHAFELCPKIPFLNKGRVVN FTCFLRELSLPLDLPSAGENKNDTIGEARILPPSVMSDAEFPKHQDESPPHH" misc_feature 347..670 /gene="Efhc1.1" /note="Domains in hypothetical proteins in Drosophila, C. elegans and mammals. Occurs singly in some nucleoside diphosphate kinases; Region: DM10; smart00676" /db_xref="CDD:128921" misc_feature 797..1213 /gene="Efhc1.1" /note="Domains in hypothetical proteins in Drosophila, C. elegans and mammals. Occurs singly in some nucleoside diphosphate kinases; Region: DM10; smart00676" /db_xref="CDD:128921" misc_feature 1376..1696 /gene="Efhc1.1" /note="DM10 domain; Region: DM10_dom; pfam06565" /db_xref="CDD:461948" polyA_site 2609 /gene="Efhc1.1" /experiment="COORDINATES: polyA evidence [ECO:0006239]" ORIGIN 1 ttgatatact ggtttcatgt tcagtattgt atttagagtg cacacacgac tacagaatat 61 tactaaacta tttaagcttc gatttattta gatcacagac acaatgctgc gcattcccgg 121 gatgcctctg cttccgggca ctctattccg cgatgtatcc aagggccact atcccaagcc 181 gcaatcgctg tccaacttcc agggactcag catgctcagc gatcgccagc aaccgcctcc 241 cgtggaatcg ggcagcgtta cggtggacat aagctgcccg cccgtcggcg ccgcctccat 301 ttatccgccg agatcgggtc cccggatgcc gccgtggctg gcctacgaca agaaggtgct 361 gtgcttcaac gcctacttca agcagaccct ccaggaggtc tatcacgcac cctacttggt 421 gcgccgggtg aagatctact actatctcga ggacggcact ttggagatct acgagccgcg 481 cgtcgacaac tcgggcatcg tccagggatg tgtggtccat cggcaacgcg tcccgaaggc 541 gccgccctgc gacaacgagt tcatgtcctt aattgattta aacgttgatc agaccgttca 601 aatattcgat cggcagtatc atatcaccaa ttgtgatcag ttcacgcggg attttctcaa 661 caagcgcggc ataaccgtgc cggatccagt gaaatcgcct tgcgatccca ccgaggcgtt 721 cagaaagcgg caggagcaac ccaaagtggg caatcttata ccgaagaacc acccgtttgc 781 ccagttcctc aagtacgatc ggcagatact caagtttcag gcctactggg acgatcgcac 841 cgagttcgga gacgtacgaa agctggaagt gtgttactat ctagccgacg atactataga 901 gatcaaggaa caacacattc gaaactcagg tcgcgacggg ccgacagtat ttcttaagcg 961 aggtcgcttg gcacgagaat tcgaaggcct cactttacca ggtcagatga ctccgatgac 1021 gcttctgaac gttctgggca caaatatgcg caacgtgcgc tactgcgtgg atcctttgaa 1081 cacgggcaac aaggagatcc actactacag ggagcgggat ctgcagattg gcagcgtgat 1141 aaatgtctat ggccgggcgg tgataatcac cgagctggat cccttcaccc agaactacta 1201 tcgtcagcgt tatgggatcc aggacttcac accgctgccg attcccagcc gatccgacga 1261 ttgtgcggat cacagggcgg gcgaacgcca actgccgccg tacaacggat ggggcagcta 1321 cgaggattcg gtgggcaact gcatctccgt ggagcccaaa ccgccgcgga cggacttcaa 1381 gaagttcatc aagtacgatc gctacgttct gcgctacggt gccaaaatgc tgtcgaccat 1441 caaggcgaat tgcgagcgca ttttcgtgat tagctactat ctcagcgatg atacgctgca 1501 gatacaggag attgcggtgc gcaattcggg cttcctgggc ggcgagttca tgaagcgcac 1561 ccgtttggag ctgcccggcc aggagagatt ctcgtgcaag cagccgcagt actacatgcc 1621 cttcaacttc tttatcggct ccaccatgtc gctgaaggac ttcatcttcc acattgtctc 1681 ggcggatgag tacacgctca tgtatatgga gcaccatccg gagatcttca gccaggcgaa 1741 tgtggtgctc atcatggaga aggttcgccg ctccctgcag catcgaatgg ccgagtttgt 1801 gggctcctgc gtgccggatt gtacggatct ggagaagcag cgcgatgtct tcgtgtcctt 1861 cgagagcttt aagggctcgc tgatcggcat aattggcaat cagatcagcg accacgagat 1921 tatcaccttg tgcaggcact tttcggcgga gcgcagtcag ccgcatgcct gcgatcgttc 1981 gactgtgcgg gcggctgccc atctggagct gaagcggtcc ctgtggaatg cccgcgaaga 2041 tctgatggag cacttccatc acatcaatcc cacgaatcag cccttcctgc cggaatccaa 2101 ggtgcgctcc gccctgcgcg gctgtcgcct gcccttctct ctggagttaa tcgacaacat 2161 cctgtccatc ttgaatcgca acgagtgcga tcacatcgag gtctgcgacc tgatgaactt 2221 catcgacgtt tcctgcggca agggatgcga catggtgccc gtgaaccacg ccttcgagct 2281 gtgccccaag attccgttcc tgaacaaggg tcgtgtggtg aacttcacct gcttcctgcg 2341 ggaactcagc ctgccccttg atttgccctc ggctggcgag aacaagaacg acaccattgg 2401 cgaggccagg atcctgccgc cgtcggtgat gtcggacgcc gagttcccaa agcaccagga 2461 tgaatcacca cctcatcatt gagcttctat ctatctatat tccgttccaa atttctggtt 2521 gtaattcatt ccattctggt tcgaaatata tttaaaaatc ggtttattct ttcggttaaa 2581 tcaatcccta gaaatattta aaaatcggt